RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 YOL073CQ08232 322 aa2.84□□□□□ -1.95
snR48snR48 PEX2P32800 271 aa2.83□□□□□ -1.96
snR48snR48 VPS53P47061 822 aa2.83□□□□□ -1.96
snR48snR48 IMO32P53219 342 aa2.83□□□□□ -1.96
snR48snR48 VTS1Q08831 523 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
snR48snR48 PUP1P25043 261 aa2.82□□□□□ -1.96
snR48snR48 RVS167P39743 482 aaKnown RBP2.82□□□□□ -1.96
snR48snR48 NOG1Q02892 647 aaKnown RBP2.82□□□□□ -1.96
snR48snR48 YLR040CQ07988 224 aa2.82□□□□□ -1.96
snR48snR48 YNL162W-AQ3E7A8 72 aa2.82□□□□□ -1.96
snR48snR48 GCV2P49095 1034 aa2.81□□□□□ -1.96
snR48snR48 HOS3Q02959 697 aaKnown RBP2.81□□□□□ -1.96
snR48snR48 ACF2Q12168 779 aa2.81□□□□□ -1.96
snR48snR48 KIN2P13186 1147 aaKnown RBP2.8□□□□□ -1.96
snR48snR48 TIM44Q01852 431 aa2.8□□□□□ -1.96
snR48snR48 RKM2Q03942 479 aa2.8□□□□□ -1.96
snR48snR48 EFT1P32324 842 aaKnown RBP2.79□□□□□ -1.96
snR48snR48 BUL1P48524 976 aa2.79□□□□□ -1.96
snR48snR48 UFD2P54860 961 aa2.79□□□□□ -1.96
snR48snR48 KIP1P28742 1111 aa2.78□□□□□ -1.96
snR48snR48 SPC42P36094 363 aa2.78□□□□□ -1.96
snR48snR48 LEO1P38439 464 aa2.78□□□□□ -1.96
snR48snR48 MSL5Q12186 476 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
snR48snR48 RPN3P40016 523 aaKnown RBP2.77□□□□□ -1.97
snR48snR48 GND2P53319 492 aa2.77□□□□□ -1.97
snR48snR48 ENB1Q08299 606 aa2.77□□□□□ -1.97
snR48snR48 BNR1P40450 1375 aa2.76□□□□□ -1.97
snR48snR48 VMA4P22203 233 aaKnown RBP2.76□□□□□ -1.97
snR48snR48 SUL1P38359 859 aa2.76□□□□□ -1.97
snR48snR48 CHA4P43634 648 aa2.76□□□□□ -1.97
snR48snR48 MET12P46151 657 aa2.76□□□□□ -1.97
snR48snR48 BSC2Q05611 235 aa2.76□□□□□ -1.97
snR48snR48 LAS17Q12446 633 aa2.76□□□□□ -1.97
snR48snR48 FUR4P05316 633 aaKnown RBP2.75□□□□□ -1.97
snR48snR48 KTR4P38131 464 aa2.75□□□□□ -1.97
snR48snR48 ATG14P38270 344 aa2.75□□□□□ -1.97
snR48snR48 HGH1P48362 394 aaKnown RBP2.75□□□□□ -1.97
snR48snR48 YNR063WP53749 607 aa2.75□□□□□ -1.97
snR48snR48 MSC2Q03455 724 aa2.75□□□□□ -1.97
snR48snR48 ADY3Q07732 790 aa2.75□□□□□ -1.97
snR48snR48 HIS5P07172 385 aa2.74□□□□□ -1.97
snR48snR48 BOL3P39724 118 aa2.74□□□□□ -1.97
snR48snR48 TPO1Q07824 586 aa2.74□□□□□ -1.97
snR48snR48 SCP160P06105 1222 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
snR48snR48 MSH3P25336 1018 aa2.73□□□□□ -1.97
snR48snR48 APL1P27351 700 aa2.73□□□□□ -1.97
snR48snR48 GPB2P39717 880 aa2.73□□□□□ -1.97
snR48snR48 YNL011CP53980 444 aa2.73□□□□□ -1.97
snR48snR48 SUT2Q12286 268 aa2.73□□□□□ -1.97
snR48snR48 KCS1Q12494 1050 aa2.73□□□□□ -1.97
snR48snR48 MND2P40577 368 aa2.72□□□□□ -1.97
snR48snR48 STB2P46679 850 aa2.72□□□□□ -1.97
snR48snR48 MON1P53129 644 aa2.72□□□□□ -1.97
snR48snR48 MUK1Q02866 612 aa2.72□□□□□ -1.97
snR48snR48 SVS1Q12254 260 aa2.72□□□□□ -1.97
snR48snR48 TUB1P09733 447 aaKnown RBP2.71□□□□□ -1.98
snR48snR48 ADD66P36040 267 aa2.71□□□□□ -1.98
snR48snR48 RIX1P38883 763 aaPredicted RBP2.71□□□□□ -1.98
snR48snR48 ATG13Q06628 738 aa2.71□□□□□ -1.98
snR48snR48 ILV6P25605 309 aaKnown RBP2.7□□□□□ -1.98
snR48snR48 SDS3P40505 327 aa2.7□□□□□ -1.98
snR48snR48 CDC55Q00362 526 aa2.7□□□□□ -1.98
snR48snR48 MAP1Q01662 387 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
snR48snR48 YMR206WQ03695 313 aa2.7□□□□□ -1.98
snR48snR48 PEP7P32609 515 aa2.69□□□□□ -1.98
snR48snR48 AFG2P32794 780 aa2.69□□□□□ -1.98
snR48snR48 PPZ2P33329 710 aa2.69□□□□□ -1.98
snR48snR48 FLO10P36170 1169 aa2.69□□□□□ -1.98
snR48snR48 RDH54P38086 958 aa2.69□□□□□ -1.98
snR48snR48 THI7Q05998 598 aa2.69□□□□□ -1.98
snR48snR48 INP54Q08227 384 aaKnown RBP2.69□□□□□ -1.98
snR48snR48 MNL2Q12205 849 aa2.69□□□□□ -1.98
snR48snR48 RPP2AP05319 106 aaKnown RBP2.68□□□□□ -1.98
snR48snR48 ERG4P25340 473 aa2.68□□□□□ -1.98
snR48snR48 CPS1P27614 576 aa2.68□□□□□ -1.98
snR48snR48 POA1P38218 177 aa2.67□□□□□ -1.98
snR48snR48 YPL260WQ08977 551 aa2.67□□□□□ -1.98
snR48snR48 YFL054CP43549 646 aa2.66□□□□□ -1.98
snR48snR48 DAK2P43550 591 aa2.65□□□□□ -1.99
snR48snR48 MRH1Q12117 320 aaPredicted RBP2.65□□□□□ -1.99
snR48snR48 PTC5Q12511 572 aa2.65□□□□□ -1.99
snR48snR48 PPR1P07272 904 aaPredicted RBP2.64□□□□□ -1.99
snR48snR48 GAT1P43574 510 aa2.64□□□□□ -1.99
snR48snR48 PEX13P80667 386 aa2.64□□□□□ -1.99
snR48snR48 RNT1Q02555 471 aa2.64□□□□□ -1.99
snR48snR48 YML083CQ04526 418 aa2.64□□□□□ -1.99
snR48snR48 HBT1Q07653 1046 aaKnown RBP2.63□□□□□ -1.99
snR48snR48 GUP2Q08929 609 aa2.63□□□□□ -1.99
snR48snR48 GFA1P14742 717 aaKnown RBP2.62□□□□□ -1.99
snR48snR48 KAR4P25583 335 aa2.62□□□□□ -1.99
snR48snR48 BPL1P48445 690 aaPredicted RBP2.62□□□□□ -1.99
snR48snR48 PUS2P53167 370 aa2.62□□□□□ -1.99
snR48snR48 MRPS35P53292 345 aa2.62□□□□□ -1.99
snR48snR48 ARO10Q06408 635 aa2.62□□□□□ -1.99
snR48snR48 NPC2Q12408 173 aa2.62□□□□□ -1.99
snR48snR48 TRP4P07285 380 aaPredicted RBP2.61□□□□□ -1.99
snR48snR48 TDP1P38319 544 aa2.61□□□□□ -1.99
snR48snR48 TAH11P47112 604 aa2.61□□□□□ -1.99
snR48snR48 TRS120Q04183 1289 aa2.61□□□□□ -1.99
snR48snR48 YCS4Q06156 1176 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms