RNA–Protein interactions for RNA: snR17a

snR17a, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17a, Length 333 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17a	snR17a	BRN1	P38170	754 aa		4.68	□□□□□ -1.66
snR17a	snR17a	MRPL22	P53881	309 aa		4.68	□□□□□ -1.66
snR17a	snR17a	RSC58	Q07979	502 aa		4.68	□□□□□ -1.66
snR17a	snR17a	CYC8	P14922	966 aa		4.67	□□□□□ -1.66
snR17a	snR17a	AFG2	P32794	780 aa		4.67	□□□□□ -1.66
snR17a	snR17a	RPS26A	P39938	119 aa	Known RBP	4.67	□□□□□ -1.66
snR17a	snR17a	RPS26B	P39939	119 aa	Known RBP	4.67	□□□□□ -1.66
snR17a	snR17a	YJR008W	P47085	338 aa		4.67	□□□□□ -1.66
snR17a	snR17a	TNA1	P53322	534 aa		4.67	□□□□□ -1.66
snR17a	snR17a	HOS3	Q02959	697 aa	Known RBP	4.67	□□□□□ -1.66
snR17a	snR17a	HDA2	Q06629	674 aa		4.67	□□□□□ -1.66
snR17a	snR17a	YPL260W	Q08977	551 aa		4.67	□□□□□ -1.66
snR17a	snR17a	SPS1	P08458	490 aa		4.66	□□□□□ -1.66
snR17a	snR17a	DEF1	P35732	738 aa	Known RBP	4.66	□□□□□ -1.66
snR17a	snR17a	ALG3	P38179	458 aa		4.66	□□□□□ -1.66
snR17a	snR17a	ETP1	P38748	585 aa	Known RBP	4.66	□□□□□ -1.66
snR17a	snR17a	RPN3	P40016	523 aa	Known RBP	4.66	□□□□□ -1.66
snR17a	snR17a	OSW7	P43611	510 aa		4.66	□□□□□ -1.66
snR17a	snR17a	SNO2	P53823	222 aa		4.66	□□□□□ -1.66
snR17a	snR17a	SIW14	P53965	281 aa		4.66	□□□□□ -1.66
snR17a	snR17a	PRP6	P19735	899 aa	Predicted RBP	4.65	□□□□□ -1.67
snR17a	snR17a	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
snR17a	snR17a	SEC8	P32855	1065 aa		4.65	□□□□□ -1.67
snR17a	snR17a	YJR107W	P47145	328 aa		4.65	□□□□□ -1.67
snR17a	snR17a	RSB1	Q08417	382 aa		4.65	□□□□□ -1.67
snR17a	snR17a	YOR352W	Q08816	343 aa		4.65	□□□□□ -1.67
snR17a	snR17a	BAP2	P38084	609 aa		4.64	□□□□□ -1.67
snR17a	snR17a	PIK1	P39104	1066 aa		4.64	□□□□□ -1.67
snR17a	snR17a	GPB2	P39717	880 aa		4.64	□□□□□ -1.67
snR17a	snR17a	RIM8	P53179	542 aa		4.64	□□□□□ -1.67
snR17a	snR17a	ROD1	Q02805	837 aa		4.64	□□□□□ -1.67
snR17a	snR17a	MRL1	Q06815	381 aa		4.64	□□□□□ -1.67
snR17a	snR17a	YDL177C	Q12257	170 aa		4.64	□□□□□ -1.67
snR17a	snR17a	SPO21	Q12411	609 aa		4.64	□□□□□ -1.67
snR17a	snR17a	RAD27	P26793	382 aa		4.63	□□□□□ -1.67
snR17a	snR17a	MKK2	P32491	506 aa		4.63	□□□□□ -1.67
snR17a	snR17a	AIM3	P38266	947 aa	Known RBP	4.63	□□□□□ -1.67
snR17a	snR17a	RGD1	P38339	666 aa		4.63	□□□□□ -1.67
snR17a	snR17a	SEC26	P41810	973 aa	Known RBP	4.63	□□□□□ -1.67
snR17a	snR17a	HNT2	P49775	206 aa		4.63	□□□□□ -1.67
snR17a	snR17a	ESF1	Q06344	628 aa	Known RBP	4.63	□□□□□ -1.67
snR17a	snR17a	ESC8	Q08119	714 aa		4.63	□□□□□ -1.67
snR17a	snR17a	ATE1	P16639	503 aa		4.62	□□□□□ -1.67
snR17a	snR17a	SYP1	P25623	870 aa	Known RBP	4.62	□□□□□ -1.67
snR17a	snR17a	MCM2	P29469	868 aa		4.62	□□□□□ -1.67
snR17a	snR17a	PEP7	P32609	515 aa		4.62	□□□□□ -1.67
snR17a	snR17a	THI80	P35202	319 aa		4.62	□□□□□ -1.67
snR17a	snR17a	YKL222C	P35995	705 aa		4.62	□□□□□ -1.67
snR17a	snR17a	RAT1	Q02792	1006 aa	Known RBP	4.62	□□□□□ -1.67
snR17a	snR17a	RCL1	Q08096	367 aa	Predicted RBP	4.62	□□□□□ -1.67
snR17a	snR17a	SOD2	P00447	233 aa		4.61	□□□□□ -1.67
snR17a	snR17a	YCR015C	P25616	317 aa		4.61	□□□□□ -1.67
snR17a	snR17a	SPC42	P36094	363 aa		4.61	□□□□□ -1.67
snR17a	snR17a	MET10	P39692	1035 aa		4.61	□□□□□ -1.67
snR17a	snR17a	AIM21	P40563	679 aa		4.61	□□□□□ -1.67
snR17a	snR17a	ZDS1	P50111	915 aa	Known RBP	4.61	□□□□□ -1.67
snR17a	snR17a	RMD1	Q03441	430 aa		4.61	□□□□□ -1.67
snR17a	snR17a	RPS13	P05756	151 aa	Known RBP	4.6	□□□□□ -1.67
snR17a	snR17a	GCR1	P07261	785 aa		4.6	□□□□□ -1.67
snR17a	snR17a	SNF5	P18480	905 aa		4.6	□□□□□ -1.67
snR17a	snR17a	CNN1	P43618	361 aa		4.6	□□□□□ -1.67
snR17a	snR17a	MPP10	P47083	593 aa	Known RBP	4.6	□□□□□ -1.67
snR17a	snR17a	SPR28	Q04921	423 aa		4.6	□□□□□ -1.67
snR17a	snR17a	RRP15	Q06511	250 aa	Predicted RBP	4.6	□□□□□ -1.67
snR17a	snR17a	DBP5	P20449	482 aa	Known RBP	4.59	□□□□□ -1.67
snR17a	snR17a	HXT13	P39924	564 aa		4.59	□□□□□ -1.67
snR17a	snR17a	NOP2	P40991	618 aa	Known RBP	4.59	□□□□□ -1.67
snR17a	snR17a	GNP1	P48813	663 aa		4.59	□□□□□ -1.67
snR17a	snR17a	HXT17	P53631	564 aa		4.59	□□□□□ -1.67
snR17a	snR17a	HXT15	P54854	567 aa		4.59	□□□□□ -1.67
snR17a	snR17a	TLG1	Q03322	224 aa		4.59	□□□□□ -1.67
snR17a	snR17a	SGD1	Q06132	899 aa		4.59	□□□□□ -1.67
snR17a	snR17a	RTT10	Q08924	1013 aa		4.59	□□□□□ -1.67
snR17a	snR17a	YPL277C	Q08989	487 aa		4.59	□□□□□ -1.67
snR17a	snR17a	TMA46	Q12000	345 aa	Known RBP	4.59	□□□□□ -1.67
snR17a	snR17a	YTA7	P40340	1379 aa		4.58	□□□□□ -1.68
snR17a	snR17a	MLS1	P30952	554 aa		4.58	□□□□□ -1.68
snR17a	snR17a	TOD6	P34219	525 aa		4.58	□□□□□ -1.68
snR17a	snR17a	RFC5	P38251	354 aa		4.58	□□□□□ -1.68
snR17a	snR17a	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
snR17a	snR17a	FYV10	P40492	516 aa		4.58	□□□□□ -1.68
snR17a	snR17a	RSM24	Q03976	319 aa		4.58	□□□□□ -1.68
snR17a	snR17a	RPS0A	P32905	252 aa	Known RBP	4.57	□□□□□ -1.68
snR17a	snR17a	GIP4	P39732	760 aa		4.57	□□□□□ -1.68
snR17a	snR17a	YLR358C	O13565	187 aa		4.56	□□□□□ -1.68
snR17a	snR17a	CYC1	P00044	109 aa	Predicted RBP	4.56	□□□□□ -1.68
snR17a	snR17a	YER152C	P10356	443 aa		4.56	□□□□□ -1.68
snR17a	snR17a	FLR1	P38124	548 aa		4.56	□□□□□ -1.68
snR17a	snR17a	LAM1	P38851	1228 aa		4.56	□□□□□ -1.68
snR17a	snR17a	RPT2	P40327	437 aa	Known RBP	4.56	□□□□□ -1.68
snR17a	snR17a	TY4A-J	P47023	414 aa		4.56	□□□□□ -1.68
snR17a	snR17a	KIN2	P13186	1147 aa	Known RBP	4.55	□□□□□ -1.68
snR17a	snR17a	RER2	P35196	286 aa		4.55	□□□□□ -1.68
snR17a	snR17a	PAM1	P37304	830 aa	Known RBP	4.55	□□□□□ -1.68
snR17a	snR17a	MCM7	P38132	845 aa		4.55	□□□□□ -1.68
snR17a	snR17a	MEF2	P39677	819 aa		4.55	□□□□□ -1.68
snR17a	snR17a	MPH1	P40562	993 aa		4.55	□□□□□ -1.68
snR17a	snR17a	TAF1	P46677	1066 aa		4.55	□□□□□ -1.68
snR17a	snR17a	OYE2	Q03558	400 aa	Known RBP	4.55	□□□□□ -1.68
snR17a	snR17a	GNT1	Q12096	491 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms