RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeastyeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPN1YPR133C UTP4Q06679 776 aaKnown RBP5.3□□□□□ -1.56
SPN1YPR133C LEU1P07264 779 aaKnown RBP5.29□□□□□ -1.56
SPN1YPR133C SUV3P32580 737 aa5.29□□□□□ -1.56
SPN1YPR133C HXT5P38695 592 aa5.29□□□□□ -1.56
SPN1YPR133C FIR1P40020 876 aa5.29□□□□□ -1.56
SPN1YPR133C ATG1P53104 897 aa5.29□□□□□ -1.56
SPN1YPR133C SRT1Q03175 343 aa5.29□□□□□ -1.56
SPN1YPR133C ECM30Q06673 1274 aa5.29□□□□□ -1.56
SPN1YPR133C SUP35P05453 685 aaKnown RBP5.28□□□□□ -1.56
SPN1YPR133C RPT3P33298 428 aaKnown RBP5.28□□□□□ -1.56
SPN1YPR133C OCT1P35999 772 aa5.28□□□□□ -1.56
SPN1YPR133C YFL066CP43538 392 aa5.28□□□□□ -1.56
SPN1YPR133C YFH7P43591 353 aa5.28□□□□□ -1.56
SPN1YPR133C KRE33P53914 1056 aaKnown RBP5.28□□□□□ -1.56
SPN1YPR133C IOC4Q04213 475 aa5.28□□□□□ -1.56
SPN1YPR133C PUN1Q06991 263 aa5.28□□□□□ -1.56
SPN1YPR133C THI72Q08579 599 aa5.28□□□□□ -1.56
SPN1YPR133C YMR084WA2P2R3 262 aa5.27□□□□□ -1.57
SPN1YPR133C PMA1P05030 918 aaKnown RBP5.27□□□□□ -1.57
SPN1YPR133C ADP1P25371 1049 aa5.27□□□□□ -1.57
SPN1YPR133C CDC60P26637 1090 aaKnown RBP5.27□□□□□ -1.57
SPN1YPR133C WHI3P34761 661 aaKnown RBP5.27□□□□□ -1.57
SPN1YPR133C MRPL16P38064 232 aa5.27□□□□□ -1.57
SPN1YPR133C CFT2Q12102 859 aaPredicted RBP5.27□□□□□ -1.57
SPN1YPR133C TY3A-GQ12173 290 aa5.27□□□□□ -1.57
SPN1YPR133C STB3Q12427 513 aa5.27□□□□□ -1.57
SPN1YPR133C YDR461C-AQ2V2P7 80 aa5.27□□□□□ -1.57
SPN1YPR133C TY3A-IQ99219 290 aa5.27□□□□□ -1.57
SPN1YPR133C SRS2P12954 1174 aa5.26□□□□□ -1.57
SPN1YPR133C CCT8P47079 568 aaKnown RBP5.26□□□□□ -1.57
SPN1YPR133C YGR122WP53272 402 aa5.26□□□□□ -1.57
SPN1YPR133C HEF3P53978 1044 aaKnown RBP5.26□□□□□ -1.57
SPN1YPR133C SYT1Q06836 1226 aa5.26□□□□□ -1.57
SPN1YPR133C ICL2Q12031 575 aa5.26□□□□□ -1.57
SPN1YPR133C SNU66Q12420 587 aaPredicted RBP5.26□□□□□ -1.57
SPN1YPR133C SNF3P10870 884 aa5.25□□□□□ -1.57
SPN1YPR133C RGP1P16664 663 aa5.25□□□□□ -1.57
SPN1YPR133C MCD4P36051 919 aa5.25□□□□□ -1.57
SPN1YPR133C UBP12P39538 1254 aa5.25□□□□□ -1.57
SPN1YPR133C ACA1P39970 489 aa5.25□□□□□ -1.57
SPN1YPR133C MPP10P47083 593 aaKnown RBP5.25□□□□□ -1.57
SPN1YPR133C MTO1P53070 669 aa5.25□□□□□ -1.57
SPN1YPR133C ADE12P80210 433 aaKnown RBP5.25□□□□□ -1.57
SPN1YPR133C TUB2P02557 457 aaKnown RBP5.24□□□□□ -1.57
SPN1YPR133C RPP1AP05318 106 aaPredicted RBP5.24□□□□□ -1.57
SPN1YPR133C SWC3P31376 625 aa5.24□□□□□ -1.57
SPN1YPR133C UIP5P36137 443 aa5.24□□□□□ -1.57
SPN1YPR133C YBR197CP38306 217 aa5.24□□□□□ -1.57
SPN1YPR133C VAB2P40003 282 aa5.24□□□□□ -1.57
SPN1YPR133C AIM21P40563 679 aa5.24□□□□□ -1.57
SPN1YPR133C YFL040WP43562 540 aa5.24□□□□□ -1.57
SPN1YPR133C YPL034WQ03083 165 aa5.24□□□□□ -1.57
SPN1YPR133C YOR131CQ12486 218 aa5.24□□□□□ -1.57
SPN1YPR133C YPR053CQ6Q5F3 151 aa5.24□□□□□ -1.57
SPN1YPR133C FPS1P23900 669 aa5.23□□□□□ -1.57
SPN1YPR133C KAP122P32767 1081 aa5.23□□□□□ -1.57
SPN1YPR133C GLO3P38682 493 aaKnown RBP5.23□□□□□ -1.57
SPN1YPR133C LYS14P40971 790 aa5.23□□□□□ -1.57
SPN1YPR133C SUT2Q12286 268 aa5.23□□□□□ -1.57
SPN1YPR133C MOT1P32333 1867 aa5.23□□□□□ -1.57
SPN1YPR133C MRPL33P20084 86 aa5.22□□□□□ -1.57
SPN1YPR133C RAD24P32641 659 aa5.22□□□□□ -1.57
SPN1YPR133C SLD2P34252 453 aa5.22□□□□□ -1.57
SPN1YPR133C PTK1P36002 662 aaPredicted RBP5.22□□□□□ -1.57
SPN1YPR133C YBL028CP38202 106 aa5.22□□□□□ -1.57
SPN1YPR133C AFG3P39925 761 aa5.22□□□□□ -1.57
SPN1YPR133C YIR042CP40586 236 aa5.22□□□□□ -1.57
SPN1YPR133C NRD1P53617 575 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
SPN1YPR133C BRE5P53741 515 aaKnown RBP5.22□□□□□ -1.57
SPN1YPR133C RPL34AP87262 121 aaPredicted RBP5.22□□□□□ -1.57
SPN1YPR133C FMP30Q02883 468 aa5.22□□□□□ -1.57
SPN1YPR133C PNP1Q05788 311 aa5.22□□□□□ -1.57
SPN1YPR133C AHC1Q12433 566 aa5.22□□□□□ -1.57
SPN1YPR133C YDR034W-BQ6Q5X2 51 aa5.22□□□□□ -1.57
SPN1YPR133C ISC10P32645 267 aa5.21□□□□□ -1.58
SPN1YPR133C MDL2P33311 773 aa5.21□□□□□ -1.58
SPN1YPR133C MXR1P40029 184 aa5.21□□□□□ -1.58
SPN1YPR133C QDR2P40474 542 aa5.21□□□□□ -1.58
SPN1YPR133C SKP1P52286 194 aa5.21□□□□□ -1.58
SPN1YPR133C SNU71P53207 620 aaKnown RBP5.21□□□□□ -1.58
SPN1YPR133C INM2Q05533 292 aa5.21□□□□□ -1.58
SPN1YPR133C PCL8Q08966 492 aa5.21□□□□□ -1.58
SPN1YPR133C MDM20Q12387 796 aaKnown RBP5.21□□□□□ -1.58
SPN1YPR133C TUS1Q06412 1307 aa5.21□□□□□ -1.58
SPN1YPR133C RPC31P17890 251 aa5.2□□□□□ -1.58
SPN1YPR133C PRE10P21242 288 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
SPN1YPR133C VMA3P25515 160 aa5.2□□□□□ -1.58
SPN1YPR133C BOI2P39969 1040 aa5.2□□□□□ -1.58
SPN1YPR133C MSH4P40965 878 aaPredicted RBP5.2□□□□□ -1.58
SPN1YPR133C NOP2P40991 618 aaKnown RBP5.2□□□□□ -1.58
SPN1YPR133C CUS1Q02554 436 aaPredicted RBP5.2□□□□□ -1.58
SPN1YPR133C MYO1P08964 1928 aa5.19□□□□□ -1.58
SPN1YPR133C HIP1P06775 603 aa5.19□□□□□ -1.58
SPN1YPR133C SEC18P18759 758 aaKnown RBP5.19□□□□□ -1.58
SPN1YPR133C CDC3P32457 520 aaKnown RBP5.19□□□□□ -1.58
SPN1YPR133C RRN6P32786 894 aa5.19□□□□□ -1.58
SPN1YPR133C SSF1P38789 453 aaPredicted RBP5.19□□□□□ -1.58
SPN1YPR133C DYS1P38791 387 aa5.19□□□□□ -1.58
SPN1YPR133C SKN7P38889 622 aa5.19□□□□□ -1.58
SPN1YPR133C UBX5Q06682 500 aa5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms