RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C PSR2Q07949 397 aa9.31□□□□□ -0.92
SRP54YPR088C ARP6Q12509 438 aa9.31□□□□□ -0.92
SRP54YPR088C CKA2P19454 339 aa9.31□□□□□ -0.92
SRP54YPR088C YKR018CP36114 725 aa9.31□□□□□ -0.92
SRP54YPR088C ISW1P38144 1129 aa9.31□□□□□ -0.92
SRP54YPR088C FYV10P40492 516 aa9.31□□□□□ -0.92
SRP54YPR088C SSL2Q00578 843 aa9.31□□□□□ -0.92
SRP54YPR088C SPH1Q06160 661 aa9.31□□□□□ -0.92
SRP54YPR088C SMC6Q12749 1114 aa9.31□□□□□ -0.92
SRP54YPR088C SES1P07284 462 aaKnown RBP9.3□□□□□ -0.92
SRP54YPR088C MIC60P36112 540 aa9.3□□□□□ -0.92
SRP54YPR088C BSD2P38356 321 aa9.3□□□□□ -0.92
SRP54YPR088C NOC2P39744 710 aaKnown RBP9.3□□□□□ -0.92
SRP54YPR088C VTC2P43585 828 aa9.3□□□□□ -0.92
SRP54YPR088C CBK1P53894 756 aa9.3□□□□□ -0.92
SRP54YPR088C ORC4P54791 529 aa9.3□□□□□ -0.92
SRP54YPR088C CFT2Q12102 859 aaPredicted RBP9.3□□□□□ -0.92
SRP54YPR088C ILV1P00927 576 aaKnown RBP9.29□□□□□ -0.92
SRP54YPR088C HVG1P0CE11 249 aa9.29□□□□□ -0.92
SRP54YPR088C VMA2P16140 517 aaKnown RBP9.29□□□□□ -0.92
SRP54YPR088C PET10P36139 283 aa9.29□□□□□ -0.92
SRP54YPR088C ROG3P43602 733 aa9.29□□□□□ -0.92
SRP54YPR088C ADY4Q05955 493 aa9.29□□□□□ -0.92
SRP54YPR088C YLR326WQ06170 240 aaKnown RBP9.29□□□□□ -0.92
SRP54YPR088C TY1B-AO13527 1196 aaKnown RBP9.28□□□□□ -0.92
SRP54YPR088C GPB2P39717 880 aa9.28□□□□□ -0.92
SRP54YPR088C YAF9P53930 226 aa9.28□□□□□ -0.92
SRP54YPR088C RBA50Q04418 439 aa9.28□□□□□ -0.92
SRP54YPR088C YLH47Q06493 454 aa9.28□□□□□ -0.92
SRP54YPR088C UTR4P32626 227 aa9.27□□□□□ -0.92
SRP54YPR088C MPE1P35728 441 aaKnown RBP9.27□□□□□ -0.92
SRP54YPR088C MCR1P36060 302 aaKnown RBP9.27□□□□□ -0.92
SRP54YPR088C TFG2P41896 400 aaPredicted RBP9.27□□□□□ -0.92
SRP54YPR088C WHI4Q07655 649 aaKnown RBP9.27□□□□□ -0.92
SRP54YPR088C FKS1P38631 1876 aaKnown RBP9.27□□□□□ -0.93
SRP54YPR088C YEL076C-AP0CX16 216 aa9.27□□□□□ -0.93
SRP54YPR088C YLR464WP0CX17 216 aa9.27□□□□□ -0.93
SRP54YPR088C ISY1P21374 235 aaPredicted RBP9.27□□□□□ -0.93
SRP54YPR088C PGM1P33401 570 aaKnown RBP9.27□□□□□ -0.93
SRP54YPR088C YEL076CP39971 216 aa9.27□□□□□ -0.93
SRP54YPR088C PTA1Q01329 785 aaPredicted RBP9.27□□□□□ -0.93
SRP54YPR088C FUS2Q05670 677 aa9.27□□□□□ -0.93
SRP54YPR088C HCR1Q05775 265 aaKnown RBP9.27□□□□□ -0.93
SRP54YPR088C DUS3Q06053 668 aaKnown RBP9.27□□□□□ -0.93
SRP54YPR088C AFT2Q08957 416 aa9.27□□□□□ -0.93
SRP54YPR088C RKM4Q12504 494 aa9.27□□□□□ -0.93
SRP54YPR088C CDC19P00549 500 aaKnown RBP9.26□□□□□ -0.93
SRP54YPR088C MIP1P15801 1254 aa9.26□□□□□ -0.93
SRP54YPR088C PKC1P24583 1151 aa9.26□□□□□ -0.93
SRP54YPR088C SHP1P34223 423 aa9.26□□□□□ -0.93
SRP54YPR088C ADE17P38009 592 aaKnown RBP9.26□□□□□ -0.93
SRP54YPR088C BCD1P38772 366 aa9.26□□□□□ -0.93
SRP54YPR088C CNM67P53865 581 aaKnown RBP9.26□□□□□ -0.93
SRP54YPR088C JIP4Q03361 876 aa9.26□□□□□ -0.93
SRP54YPR088C WAR1Q03631 944 aa9.26□□□□□ -0.93
SRP54YPR088C GFD1Q04839 188 aaKnown RBP9.26□□□□□ -0.93
SRP54YPR088C CST9Q06032 482 aa9.26□□□□□ -0.93
SRP54YPR088C ISA1Q07821 250 aaPredicted RBP9.26□□□□□ -0.93
SRP54YPR088C CDC60P26637 1090 aaKnown RBP9.25□□□□□ -0.93
SRP54YPR088C EUG1P32474 517 aa9.25□□□□□ -0.93
SRP54YPR088C IXR1P33417 597 aa9.25□□□□□ -0.93
SRP54YPR088C ERG7P38604 731 aa9.25□□□□□ -0.93
SRP54YPR088C NUP82P40368 713 aa9.25□□□□□ -0.93
SRP54YPR088C YGR125WP53273 1036 aa9.25□□□□□ -0.93
SRP54YPR088C PGA2P53903 129 aa9.25□□□□□ -0.93
SRP54YPR088C PHM6Q05637 104 aa9.25□□□□□ -0.93
SRP54YPR088C TFC8Q12308 588 aa9.25□□□□□ -0.93
SRP54YPR088C MCM2P29469 868 aa9.24□□□□□ -0.93
SRP54YPR088C UBP11P36026 717 aa9.24□□□□□ -0.93
SRP54YPR088C PSY4P38193 441 aa9.24□□□□□ -0.93
SRP54YPR088C GPD2P41911 440 aaKnown RBP9.24□□□□□ -0.93
SRP54YPR088C YGR237CP50089 785 aa9.24□□□□□ -0.93
SRP54YPR088C TLG2Q08144 397 aa9.24□□□□□ -0.93
SRP54YPR088C PGK1P00560 416 aaKnown RBP9.23□□□□□ -0.93
SRP54YPR088C ESS1P22696 170 aa9.23□□□□□ -0.93
SRP54YPR088C CLB5P30283 435 aa9.23□□□□□ -0.93
SRP54YPR088C EBP2P36049 427 aaKnown RBP9.23□□□□□ -0.93
SRP54YPR088C APE3P37302 537 aaKnown RBP9.23□□□□□ -0.93
SRP54YPR088C SIP3P38717 1229 aa9.23□□□□□ -0.93
SRP54YPR088C BRE2P43132 505 aa9.23□□□□□ -0.93
SRP54YPR088C CLN3P13365 580 aa9.23□□□□□ -0.93
SRP54YPR088C RAM2P29703 316 aa9.23□□□□□ -0.93
SRP54YPR088C SUV3P32580 737 aa9.23□□□□□ -0.93
SRP54YPR088C ASH1P34233 588 aa9.23□□□□□ -0.93
SRP54YPR088C PIH1P38768 344 aa9.23□□□□□ -0.93
SRP54YPR088C RSC30P38781 883 aa9.23□□□□□ -0.93
SRP54YPR088C SPR3P41901 512 aa9.23□□□□□ -0.93
SRP54YPR088C HUL5P53119 910 aa9.23□□□□□ -0.93
SRP54YPR088C GUP1P53154 560 aa9.23□□□□□ -0.93
SRP54YPR088C DIP5P53388 608 aa9.23□□□□□ -0.93
SRP54YPR088C SPP382Q06411 708 aaPredicted RBP9.23□□□□□ -0.93
SRP54YPR088C TMA16Q08687 178 aa9.23□□□□□ -0.93
SRP54YPR088C TY3A-GQ12173 290 aa9.23□□□□□ -0.93
SRP54YPR088C ERP3Q12403 225 aa9.23□□□□□ -0.93
SRP54YPR088C TY3A-IQ99219 290 aa9.23□□□□□ -0.93
SRP54YPR088C SRD1P09007 221 aa9.22□□□□□ -0.93
SRP54YPR088C SUP45P12385 437 aaKnown RBP9.22□□□□□ -0.93
SRP54YPR088C TKL1P23254 680 aaKnown RBP9.22□□□□□ -0.93
SRP54YPR088C VPS29P38759 282 aa9.22□□□□□ -0.93
SRP54YPR088C CTR1P49573 406 aa9.22□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms