RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeastyeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFI1YPL254W SLS1P42900 643 aa6.92□□□□□ -1.3
HFI1YPL254W YGL140CP53120 1219 aa6.92□□□□□ -1.3
HFI1YPL254W MEC3Q02574 474 aa6.92□□□□□ -1.3
HFI1YPL254W JIP5Q06214 492 aaPredicted RBP6.92□□□□□ -1.3
HFI1YPL254W YDR215CQ12240 137 aa6.92□□□□□ -1.3
HFI1YPL254W YCK2P23292 546 aaKnown RBP6.92□□□□□ -1.3
HFI1YPL254W REI1P38344 393 aaPredicted RBP6.92□□□□□ -1.3
HFI1YPL254W SVF1Q05515 481 aa6.92□□□□□ -1.3
HFI1YPL254W ALG6Q12001 544 aaKnown RBP6.92□□□□□ -1.3
HFI1YPL254W TRM3Q07527 1436 aa6.91□□□□□ -1.3
HFI1YPL254W SFA1P32771 386 aa6.91□□□□□ -1.3
HFI1YPL254W XKS1P42826 600 aa6.91□□□□□ -1.3
HFI1YPL254W PUS1Q12211 544 aaKnown RBP6.91□□□□□ -1.3
HFI1YPL254W YLL054CQ12244 843 aa6.91□□□□□ -1.3
HFI1YPL254W RAD9P14737 1309 aa6.9□□□□□ -1.3
HFI1YPL254W AI3P03877 415 aa6.9□□□□□ -1.31
HFI1YPL254W PET112P33893 541 aa6.9□□□□□ -1.31
HFI1YPL254W TAT1P38085 619 aa6.9□□□□□ -1.31
HFI1YPL254W MTR4P47047 1073 aaKnown RBP6.9□□□□□ -1.31
HFI1YPL254W TAF8Q03750 510 aa6.9□□□□□ -1.31
HFI1YPL254W HEM13P11353 328 aaKnown RBP6.89□□□□□ -1.31
HFI1YPL254W VMA4P22203 233 aaKnown RBP6.89□□□□□ -1.31
HFI1YPL254W NEM1P38757 446 aa6.89□□□□□ -1.31
HFI1YPL254W RVB2Q12464 471 aaKnown RBP6.89□□□□□ -1.31
HFI1YPL254W GCR1P07261 785 aa6.88□□□□□ -1.31
HFI1YPL254W SEC23P15303 768 aaKnown RBP6.88□□□□□ -1.31
HFI1YPL254W ARL1P38116 183 aaKnown RBP6.88□□□□□ -1.31
HFI1YPL254W YOR223WQ12015 292 aa6.88□□□□□ -1.31
HFI1YPL254W YEF3P16521 1044 aaKnown RBP6.87□□□□□ -1.31
HFI1YPL254W RSC6P25632 483 aa6.87□□□□□ -1.31
HFI1YPL254W SKN7P38889 622 aa6.87□□□□□ -1.31
HFI1YPL254W NCE103P53615 221 aa6.87□□□□□ -1.31
HFI1YPL254W UTP5Q04177 643 aaKnown RBP6.87□□□□□ -1.31
HFI1YPL254W MRL1Q06815 381 aa6.87□□□□□ -1.31
HFI1YPL254W RDH54P38086 958 aa6.86□□□□□ -1.31
HFI1YPL254W CHZ1P40019 153 aaPredicted RBP6.86□□□□□ -1.31
HFI1YPL254W VPS27P40343 622 aaKnown RBP6.86□□□□□ -1.31
HFI1YPL254W SPO74P45819 413 aa6.86□□□□□ -1.31
HFI1YPL254W DOT1Q04089 582 aaKnown RBP6.86□□□□□ -1.31
HFI1YPL254W HDA2Q06629 674 aa6.86□□□□□ -1.31
HFI1YPL254W YDL144CQ07589 356 aa6.86□□□□□ -1.31
HFI1YPL254W CDC45Q08032 650 aa6.86□□□□□ -1.31
HFI1YPL254W AVO1Q08236 1176 aa6.86□□□□□ -1.31
HFI1YPL254W REC8Q12188 680 aa6.86□□□□□ -1.31
HFI1YPL254W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
HFI1YPL254W ATG14P38270 344 aa6.85□□□□□ -1.31
HFI1YPL254W MAD1P40957 749 aa6.85□□□□□ -1.31
HFI1YPL254W YNR063WP53749 607 aa6.85□□□□□ -1.31
HFI1YPL254W MCA1Q08601 432 aa6.85□□□□□ -1.31
HFI1YPL254W BCK1Q01389 1478 aa6.85□□□□□ -1.31
HFI1YPL254W DED1P06634 604 aaKnown RBP6.85□□□□□ -1.31
HFI1YPL254W SUI2P20459 304 aaKnown RBP6.85□□□□□ -1.31
HFI1YPL254W NAP1P25293 417 aaKnown RBP6.85□□□□□ -1.31
HFI1YPL254W MNR2P35724 969 aa6.85□□□□□ -1.31
HFI1YPL254W ARI1P53111 347 aaKnown RBP6.85□□□□□ -1.31
HFI1YPL254W ELA1P53861 379 aaPredicted RBP6.85□□□□□ -1.31
HFI1YPL254W MPP10P47083 593 aaKnown RBP6.84□□□□□ -1.31
HFI1YPL254W YGR045CP53229 120 aa6.84□□□□□ -1.31
HFI1YPL254W EST2Q06163 884 aa6.84□□□□□ -1.31
HFI1YPL254W YML133CQ03099 1374 aa6.83□□□□□ -1.32
HFI1YPL254W YLL067CQ07888 1374 aa6.83□□□□□ -1.32
HFI1YPL254W YLL066CQ99208 1374 aa6.83□□□□□ -1.32
HFI1YPL254W RPP0P05317 312 aaKnown RBP6.83□□□□□ -1.32
HFI1YPL254W TAF13P11747 167 aa6.83□□□□□ -1.32
HFI1YPL254W ADD66P36040 267 aa6.83□□□□□ -1.32
HFI1YPL254W GPT2P36148 743 aa6.83□□□□□ -1.32
HFI1YPL254W RTT10Q08924 1013 aa6.83□□□□□ -1.32
HFI1YPL254W CLN2P20438 545 aa6.82□□□□□ -1.32
HFI1YPL254W YAR028WP39548 234 aa6.82□□□□□ -1.32
HFI1YPL254W ROD1Q02805 837 aa6.82□□□□□ -1.32
HFI1YPL254W VPS16Q03308 798 aa6.82□□□□□ -1.32
HFI1YPL254W CDC34P14682 295 aa6.81□□□□□ -1.32
HFI1YPL254W NAM7P30771 971 aaKnown RBP6.81□□□□□ -1.32
HFI1YPL254W AKR1P39010 764 aa6.81□□□□□ -1.32
HFI1YPL254W GNP1P48813 663 aa6.81□□□□□ -1.32
HFI1YPL254W PIN2Q12057 282 aa6.81□□□□□ -1.32
HFI1YPL254W MLP1Q02455 1875 aaKnown RBP6.81□□□□□ -1.32
HFI1YPL254W RAD27P26793 382 aa6.8□□□□□ -1.32
HFI1YPL254W CWC24P53769 259 aa6.8□□□□□ -1.32
HFI1YPL254W SIW14P53965 281 aa6.8□□□□□ -1.32
HFI1YPL254W SCT1P32784 759 aa6.79□□□□□ -1.32
HFI1YPL254W HXT13P39924 564 aa6.79□□□□□ -1.32
HFI1YPL254W YFR016CP43597 1233 aaKnown RBP6.79□□□□□ -1.32
HFI1YPL254W RRP46P53256 223 aaPredicted RBP6.79□□□□□ -1.32
HFI1YPL254W HXT17P53631 564 aa6.79□□□□□ -1.32
HFI1YPL254W HXT15P54854 567 aa6.79□□□□□ -1.32
HFI1YPL254W YPL034WQ03083 165 aa6.79□□□□□ -1.32
HFI1YPL254W GIC2Q06648 383 aa6.79□□□□□ -1.32
HFI1YPL254W LAP2Q10740 671 aa6.79□□□□□ -1.32
HFI1YPL254W DUT1P33317 147 aa6.79□□□□□ -1.32
HFI1YPL254W MSH4P40965 878 aaPredicted RBP6.79□□□□□ -1.32
HFI1YPL254W RKM2Q03942 479 aa6.79□□□□□ -1.32
HFI1YPL254W MAG2Q06436 670 aaKnown RBP6.79□□□□□ -1.32
HFI1YPL254W SNF2P22082 1703 aa6.79□□□□□ -1.32
HFI1YPL254W COQ2P32378 372 aa6.78□□□□□ -1.32
HFI1YPL254W IME2P32581 645 aa6.78□□□□□ -1.32
HFI1YPL254W FPR3P38911 411 aaKnown RBP6.78□□□□□ -1.32
HFI1YPL254W VAC8P39968 578 aa6.78□□□□□ -1.32
HFI1YPL254W CCT8P47079 568 aaKnown RBP6.78□□□□□ -1.32
HFI1YPL254W ALD6P54115 500 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms