RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDE1	YPL110C	TAF8	Q03750	510 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	RSC3	Q06639	885 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	MPC54	Q08550	464 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	PDR18	P53756	1333 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	TRM1	P15565	570 aa	Known RBP	4.86	□□□□□ -1.63
GDE1	YPL110C	MGM1	P32266	881 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	PHB1	P40961	287 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	DAS1	P47005	663 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	IML2	P47031	731 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	OCA1	P50946	238 aa	Predicted RBP	4.86	□□□□□ -1.63
GDE1	YPL110C	RPN4	Q03465	531 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	PUF6	Q04373	656 aa	Known RBP	4.86	□□□□□ -1.63
GDE1	YPL110C	OPY2	Q06810	360 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	TUS1	Q06412	1307 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	COX6	P00427	148 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	CDC37	P06101	506 aa	Known RBP	4.86	□□□□□ -1.63
GDE1	YPL110C	STE13	P33894	931 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	RXT2	P38255	430 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	CUS1	Q02554	436 aa	Predicted RBP	4.86	□□□□□ -1.63
GDE1	YPL110C	SWA2	Q06677	668 aa		4.86	□□□□□ -1.63
GDE1	YPL110C	MCM3	P24279	971 aa	Known RBP	4.85	□□□□□ -1.63
GDE1	YPL110C	APL2	P36000	726 aa	Predicted RBP	4.85	□□□□□ -1.63
GDE1	YPL110C	IFA38	P38286	347 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	RRP8	P38961	392 aa	Known RBP	4.85	□□□□□ -1.63
GDE1	YPL110C	MVP1	P40959	511 aa	Known RBP	4.85	□□□□□ -1.63
GDE1	YPL110C	REF2	P42073	533 aa	Predicted RBP	4.85	□□□□□ -1.63
GDE1	YPL110C	RAD17	P48581	401 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	OYE2	Q03558	400 aa	Known RBP	4.85	□□□□□ -1.63
GDE1	YPL110C	TSR1	Q07381	788 aa	Known RBP	4.85	□□□□□ -1.63
GDE1	YPL110C	YPL277C	Q08989	487 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	SET3	P36124	751 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	YBR242W	P38331	238 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	XKS1	P42826	600 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	CWC21	Q03375	135 aa	Known RBP	4.85	□□□□□ -1.63
GDE1	YPL110C	DML1	Q03652	475 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	NSE3	Q05541	303 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	YDL144C	Q07589	356 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	YPL225W	Q08971	146 aa	Known RBP	4.85	□□□□□ -1.63
GDE1	YPL110C	DBP10	Q12389	995 aa	Known RBP	4.85	□□□□□ -1.63
GDE1	YPL110C	HOM3	P10869	527 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	SSE1	P32589	693 aa	Known RBP	4.85	□□□□□ -1.63
GDE1	YPL110C	ECM32	P32644	1121 aa	Known RBP	4.85	□□□□□ -1.63
GDE1	YPL110C	YKL063C	P35725	167 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	SAP155	P43612	1002 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	IRC3	Q06683	689 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	YPR097W	Q06839	1073 aa		4.85	□□□□□ -1.63
GDE1	YPL110C	ADE6	P38972	1358 aa	Known RBP	4.84	□□□□□ -1.63
GDE1	YPL110C	RPP0	P05317	312 aa	Known RBP	4.84	□□□□□ -1.63
GDE1	YPL110C	SSC1	P0CS90	654 aa	Known RBP	4.84	□□□□□ -1.63
GDE1	YPL110C	MRC1	P25588	1096 aa		4.84	□□□□□ -1.63
GDE1	YPL110C	ITR1	P30605	584 aa		4.84	□□□□□ -1.63
GDE1	YPL110C	GRX7	P38068	203 aa		4.84	□□□□□ -1.63
GDE1	YPL110C	BRX1	Q08235	291 aa	Known RBP	4.84	□□□□□ -1.63
GDE1	YPL110C	TAT2	P38967	592 aa		4.84	□□□□□ -1.63
GDE1	YPL110C	DOT6	P40059	670 aa	Known RBP	4.84	□□□□□ -1.63
GDE1	YPL110C	SBE2	P42223	864 aa	Known RBP	4.84	□□□□□ -1.63
GDE1	YPL110C	KRE33	P53914	1056 aa	Known RBP	4.84	□□□□□ -1.63
GDE1	YPL110C	ULP1	Q02724	621 aa		4.84	□□□□□ -1.63
GDE1	YPL110C	USO1	P25386	1790 aa		4.84	□□□□□ -1.63
GDE1	YPL110C	HIS3	P06633	220 aa		4.84	□□□□□ -1.64
GDE1	YPL110C	SUI2	P20459	304 aa	Known RBP	4.84	□□□□□ -1.64
GDE1	YPL110C	PEX18	P38855	283 aa		4.84	□□□□□ -1.64
GDE1	YPL110C	ESL1	P40456	1118 aa		4.84	□□□□□ -1.64
GDE1	YPL110C	YJR107W	P47145	328 aa		4.84	□□□□□ -1.64
GDE1	YPL110C	ATF2	P53296	535 aa		4.84	□□□□□ -1.64
GDE1	YPL110C	ACF2	Q12168	779 aa		4.84	□□□□□ -1.64
GDE1	YPL110C	TAF3	Q12297	353 aa		4.84	□□□□□ -1.64
GDE1	YPL110C	TFC8	Q12308	588 aa		4.84	□□□□□ -1.64
GDE1	YPL110C	RPC34	P32910	317 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	MIA40	P36046	403 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	RIM11	P38615	370 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	ERP5	P38819	212 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	SWD1	P39706	426 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	ATG1	P53104	897 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	GIC2	Q06648	383 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	AI2	P03876	854 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	SUI3	P09064	285 aa	Known RBP	4.83	□□□□□ -1.64
GDE1	YPL110C	PET123	P17558	318 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	BMH2	P34730	273 aa	Known RBP	4.83	□□□□□ -1.64
GDE1	YPL110C	PEX14	P53112	341 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	ARP5	P53946	755 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	SXM1	Q04175	944 aa	Known RBP	4.83	□□□□□ -1.64
GDE1	YPL110C	OSH2	Q12451	1283 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	NOT5	Q12514	560 aa	Predicted RBP	4.83	□□□□□ -1.64
GDE1	YPL110C	YIL002W-A	Q3E7Z5	69 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	PMA2	P19657	947 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	DIT1	P21623	536 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	PTR2	P32901	601 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	HSP78	P33416	811 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	URB2	P47108	1174 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	IPI3	P53877	555 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	ADA2	Q02336	434 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	RNH1	Q04740	348 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	DBP9	Q06218	594 aa	Known RBP	4.83	□□□□□ -1.64
GDE1	YPL110C	GRC3	Q07845	632 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	TRM8	Q12009	286 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	HTZ1	Q12692	134 aa	Known RBP	4.83	□□□□□ -1.64
GDE1	YPL110C	YBL113C	Q7M4S9	792 aa		4.83	□□□□□ -1.64
GDE1	YPL110C	CDC60	P26637	1090 aa	Known RBP	4.82	□□□□□ -1.64
GDE1	YPL110C	ITR2	P30606	609 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms