RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W SBP1P10080 294 aaKnown RBP3.37□□□□□ -1.87
BRO1YPL084W YER152CP10356 443 aa3.37□□□□□ -1.87
BRO1YPL084W YCK2P23292 546 aaKnown RBP3.37□□□□□ -1.87
BRO1YPL084W RPL8BP29453 256 aaKnown RBP3.37□□□□□ -1.87
BRO1YPL084W NAM7P30771 971 aaKnown RBP3.37□□□□□ -1.87
BRO1YPL084W PBP2P38151 413 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
BRO1YPL084W PBY1P38254 753 aa3.37□□□□□ -1.87
BRO1YPL084W YHR020WP38708 688 aaKnown RBP3.37□□□□□ -1.87
BRO1YPL084W SNF7P39929 240 aaKnown RBP3.37□□□□□ -1.87
BRO1YPL084W RNH70P53331 553 aa3.37□□□□□ -1.87
BRO1YPL084W FLC1Q08967 793 aa3.37□□□□□ -1.87
BRO1YPL084W YDR215CQ12240 137 aa3.37□□□□□ -1.87
BRO1YPL084W SPO21Q12411 609 aa3.37□□□□□ -1.87
BRO1YPL084W TAT1P38085 619 aa3.37□□□□□ -1.87
BRO1YPL084W AKR1P39010 764 aa3.37□□□□□ -1.87
BRO1YPL084W BUD6P41697 788 aa3.37□□□□□ -1.87
BRO1YPL084W OSW7P43611 510 aa3.37□□□□□ -1.87
BRO1YPL084W ALT1P52893 592 aa3.37□□□□□ -1.87
BRO1YPL084W ARI1P53111 347 aaKnown RBP3.37□□□□□ -1.87
BRO1YPL084W EAR1Q03212 550 aa3.37□□□□□ -1.87
BRO1YPL084W TPP1Q03796 238 aa3.37□□□□□ -1.87
BRO1YPL084W EAF1Q06337 982 aa3.37□□□□□ -1.87
BRO1YPL084W FMP25Q08023 583 aa3.37□□□□□ -1.87
BRO1YPL084W YPL260WQ08977 551 aa3.37□□□□□ -1.87
BRO1YPL084W GNT1Q12096 491 aa3.37□□□□□ -1.87
BRO1YPL084W PPG1P32838 368 aa3.36□□□□□ -1.87
BRO1YPL084W SIP5P40210 489 aaKnown RBP3.36□□□□□ -1.87
BRO1YPL084W PFD1P46988 109 aa3.36□□□□□ -1.87
BRO1YPL084W YJL045WP47052 634 aa3.36□□□□□ -1.87
BRO1YPL084W SPP382Q06411 708 aaPredicted RBP3.36□□□□□ -1.87
BRO1YPL084W HSP60P19882 572 aaKnown RBP3.36□□□□□ -1.87
BRO1YPL084W ARE1P25628 610 aa3.36□□□□□ -1.87
BRO1YPL084W RSP5P39940 809 aaKnown RBP3.36□□□□□ -1.87
BRO1YPL084W PUS7Q08647 676 aaKnown RBP3.36□□□□□ -1.87
BRO1YPL084W HRK1Q08732 759 aaKnown RBP3.36□□□□□ -1.87
BRO1YPL084W YPR053CQ6Q5F3 151 aa3.36□□□□□ -1.87
BRO1YPL084W ERP6P53198 216 aa3.35□□□□□ -1.87
BRO1YPL084W UBX5Q06682 500 aa3.35□□□□□ -1.87
BRO1YPL084W MCA1Q08601 432 aa3.35□□□□□ -1.87
BRO1YPL084W RPL11AP0C0W9 174 aaKnown RBP3.35□□□□□ -1.87
BRO1YPL084W DBP2P24783 546 aaKnown RBP3.35□□□□□ -1.87
BRO1YPL084W MXR1P40029 184 aa3.35□□□□□ -1.87
BRO1YPL084W ICP55P40051 511 aa3.35□□□□□ -1.87
BRO1YPL084W MMM1P41800 426 aa3.35□□□□□ -1.87
BRO1YPL084W ALR2P43553 858 aa3.35□□□□□ -1.87
BRO1YPL084W PHM7Q12252 991 aa3.35□□□□□ -1.87
BRO1YPL084W RPL11BQ3E757 174 aaPredicted RBP3.35□□□□□ -1.87
BRO1YPL084W CIT1P00890 479 aa3.34□□□□□ -1.87
BRO1YPL084W YSC84P32793 468 aa3.34□□□□□ -1.87
BRO1YPL084W NMD2P38798 1089 aaKnown RBP3.34□□□□□ -1.87
BRO1YPL084W HOS3Q02959 697 aaKnown RBP3.34□□□□□ -1.87
BRO1YPL084W PRP9P19736 530 aaKnown RBP3.34□□□□□ -1.88
BRO1YPL084W WHI3P34761 661 aaKnown RBP3.34□□□□□ -1.88
BRO1YPL084W SKN7P38889 622 aa3.34□□□□□ -1.88
BRO1YPL084W PNT1P38969 423 aa3.34□□□□□ -1.88
BRO1YPL084W CHZ1P40019 153 aaPredicted RBP3.34□□□□□ -1.88
BRO1YPL084W NUP82P40368 713 aa3.34□□□□□ -1.88
BRO1YPL084W UTP8P53276 713 aaKnown RBP3.34□□□□□ -1.88
BRO1YPL084W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.34□□□□□ -1.88not detected
BRO1YPL084W PPM2Q08282 695 aa3.34□□□□□ -1.88
BRO1YPL084W CAN1P04817 590 aa3.33□□□□□ -1.88
BRO1YPL084W TIM23P32897 222 aa3.33□□□□□ -1.88
BRO1YPL084W HUL4P40985 892 aa3.33□□□□□ -1.88
BRO1YPL084W YFL054CP43549 646 aa3.33□□□□□ -1.88
BRO1YPL084W YDR306CQ06640 478 aa3.33□□□□□ -1.88
BRO1YPL084W SAF1P38352 637 aa3.33□□□□□ -1.88
BRO1YPL084W CIT3P43635 486 aa3.33□□□□□ -1.88
BRO1YPL084W YVC1Q12324 675 aa3.33□□□□□ -1.88
BRO1YPL084W CHS2P14180 963 aa3.32□□□□□ -1.88
BRO1YPL084W COQ2P32378 372 aa3.32□□□□□ -1.88
BRO1YPL084W GGA2P38817 585 aaKnown RBP3.32□□□□□ -1.88
BRO1YPL084W RPN3P40016 523 aaKnown RBP3.32□□□□□ -1.88
BRO1YPL084W TNA1P53322 534 aa3.32□□□□□ -1.88
BRO1YPL084W ALG12P53730 551 aa3.32□□□□□ -1.88
BRO1YPL084W RCL1Q08096 367 aaPredicted RBP3.32□□□□□ -1.88
BRO1YPL084W MET6P05694 767 aaKnown RBP3.32□□□□□ -1.88
BRO1YPL084W ERR1P0CX10 437 aa3.32□□□□□ -1.88
BRO1YPL084W ERR2P0CX11 437 aa3.32□□□□□ -1.88
BRO1YPL084W GAL11P19659 1081 aa3.32□□□□□ -1.88
BRO1YPL084W AAR2P32357 355 aaPredicted RBP3.32□□□□□ -1.88
BRO1YPL084W BRN1P38170 754 aa3.32□□□□□ -1.88
BRO1YPL084W YHL012WP38709 493 aa3.32□□□□□ -1.88
BRO1YPL084W CCC2P38995 1004 aa3.32□□□□□ -1.88
BRO1YPL084W RCM1P53972 490 aa3.32□□□□□ -1.88
BRO1YPL084W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
BRO1YPL084W YPL034WQ03083 165 aa3.32□□□□□ -1.88
BRO1YPL084W TAF8Q03750 510 aa3.32□□□□□ -1.88
BRO1YPL084W DUS3Q06053 668 aaKnown RBP3.32□□□□□ -1.88
BRO1YPL084W ACM1Q08981 209 aa3.32□□□□□ -1.88
BRO1YPL084W PUS1Q12211 544 aaKnown RBP3.32□□□□□ -1.88
BRO1YPL084W PHO8P11491 566 aa3.31□□□□□ -1.88
BRO1YPL084W HBS1P32769 611 aaKnown RBP3.31□□□□□ -1.88
BRO1YPL084W UGA2P38067 497 aa3.31□□□□□ -1.88
BRO1YPL084W YBR284WP38150 797 aa3.31□□□□□ -1.88
BRO1YPL084W GEM1P39722 662 aa3.31□□□□□ -1.88
BRO1YPL084W YOR059CQ08448 450 aaKnown RBP3.31□□□□□ -1.88
BRO1YPL084W COQ4O13525 335 aa3.31□□□□□ -1.88
BRO1YPL084W SAM35P14693 329 aa3.31□□□□□ -1.88
BRO1YPL084W PPH3P32345 308 aa3.31□□□□□ -1.88
BRO1YPL084W CDC11P32458 415 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms