RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C THR4P16120 514 aaKnown RBP9.06□□□□□ -0.96
LSP1YPL004C RFC5P38251 354 aa9.06□□□□□ -0.96
LSP1YPL004C NPA3P47122 385 aa9.06□□□□□ -0.96
LSP1YPL004C FAR11P53917 953 aa9.06□□□□□ -0.96
LSP1YPL004C CSM3Q04659 317 aa9.06□□□□□ -0.96
LSP1YPL004C GET3Q12154 354 aaKnown RBP9.06□□□□□ -0.96
LSP1YPL004C PGI1P12709 554 aaKnown RBP9.05□□□□□ -0.96
LSP1YPL004C CLB5P30283 435 aa9.05□□□□□ -0.96
LSP1YPL004C UBP11P36026 717 aa9.05□□□□□ -0.96
LSP1YPL004C UIP5P36137 443 aa9.05□□□□□ -0.96
LSP1YPL004C NOC2P39744 710 aaKnown RBP9.05□□□□□ -0.96
LSP1YPL004C HMF1P40037 129 aaKnown RBP9.05□□□□□ -0.96
LSP1YPL004C CIT3P43635 486 aa9.05□□□□□ -0.96
LSP1YPL004C DSE4P53753 1117 aa9.05□□□□□ -0.96
LSP1YPL004C ECM30Q06673 1274 aa9.05□□□□□ -0.96
LSP1YPL004C SLK19Q08581 821 aaKnown RBP9.05□□□□□ -0.96
LSP1YPL004C TIP41Q12199 356 aa9.05□□□□□ -0.96
LSP1YPL004C YDR461C-AQ2V2P7 80 aa9.05□□□□□ -0.96
LSP1YPL004C PDC1P06169 563 aaKnown RBP9.04□□□□□ -0.96
LSP1YPL004C PCT1P13259 424 aa9.04□□□□□ -0.96
LSP1YPL004C ISW1P38144 1129 aa9.04□□□□□ -0.96
LSP1YPL004C MAL33P38157 468 aa9.04□□□□□ -0.96
LSP1YPL004C STT3P39007 718 aaKnown RBP9.04□□□□□ -0.96
LSP1YPL004C SKP2P42843 763 aa9.04□□□□□ -0.96
LSP1YPL004C UBP15P50101 1230 aa9.04□□□□□ -0.96
LSP1YPL004C YGR273CP53329 174 aa9.04□□□□□ -0.96
LSP1YPL004C TRS120Q04183 1289 aa9.04□□□□□ -0.96
LSP1YPL004C AIM33Q04516 312 aa9.04□□□□□ -0.96
LSP1YPL004C PHM6Q05637 104 aa9.04□□□□□ -0.96
LSP1YPL004C ESS1P22696 170 aa9.03□□□□□ -0.96
LSP1YPL004C PRX1P34227 261 aaKnown RBP9.03□□□□□ -0.96
LSP1YPL004C TVP38P36164 337 aa9.03□□□□□ -0.96
LSP1YPL004C ORC6P38826 435 aa9.03□□□□□ -0.96
LSP1YPL004C GAA1P39012 614 aa9.03□□□□□ -0.96
LSP1YPL004C ATG32P40458 529 aa9.03□□□□□ -0.96
LSP1YPL004C MFM1Q02783 413 aa9.03□□□□□ -0.96
LSP1YPL004C YOR296WQ08748 1289 aa9.03□□□□□ -0.96
LSP1YPL004C PGK1P00560 416 aaKnown RBP9.02□□□□□ -0.97
LSP1YPL004C ALG1P16661 449 aa9.02□□□□□ -0.97
LSP1YPL004C PGM1P33401 570 aaKnown RBP9.02□□□□□ -0.97
LSP1YPL004C GPT2P36148 743 aa9.02□□□□□ -0.97
LSP1YPL004C GPD2P41911 440 aaKnown RBP9.02□□□□□ -0.97
LSP1YPL004C PIL1P53252 339 aaKnown RBP9.02□□□□□ -0.97
LSP1YPL004C CNM67P53865 581 aaKnown RBP9.02□□□□□ -0.97
LSP1YPL004C MAM3Q12296 706 aa9.02□□□□□ -0.97
LSP1YPL004C NBL1Q3E7Y6 73 aa9.02□□□□□ -0.97
LSP1YPL004C BIK1P11709 440 aa9.01□□□□□ -0.97
LSP1YPL004C FLR1P38124 548 aa9.01□□□□□ -0.97
LSP1YPL004C RPS7BP48164 190 aaKnown RBP9.01□□□□□ -0.97
LSP1YPL004C PEX14P53112 341 aa9.01□□□□□ -0.97
LSP1YPL004C HUL5P53119 910 aa9.01□□□□□ -0.97
LSP1YPL004C ZPR1P53303 486 aaKnown RBP9.01□□□□□ -0.97
LSP1YPL004C DAK1P54838 584 aaKnown RBP9.01□□□□□ -0.97
LSP1YPL004C FMP30Q02883 468 aa9.01□□□□□ -0.97
LSP1YPL004C YPL034WQ03083 165 aa9.01□□□□□ -0.97
LSP1YPL004C YML020WQ03722 664 aa9.01□□□□□ -0.97
LSP1YPL004C EIS1Q05050 843 aaKnown RBP9.01□□□□□ -0.97
LSP1YPL004C HRQ1Q05549 1077 aa9.01□□□□□ -0.97
LSP1YPL004C PTC5Q12511 572 aa9.01□□□□□ -0.97
LSP1YPL004C ILV1P00927 576 aaKnown RBP9□□□□□ -0.97
LSP1YPL004C MCM3P24279 971 aaKnown RBP9□□□□□ -0.97
LSP1YPL004C RDS1P25611 832 aa9□□□□□ -0.97
LSP1YPL004C RME1P32338 300 aaKnown RBP9□□□□□ -0.97
LSP1YPL004C RTC4P53850 401 aa9□□□□□ -0.97
LSP1YPL004C RTP1Q12751 981 aa9□□□□□ -0.97
LSP1YPL004C HEM1P09950 548 aaPredicted RBP8.99□□□□□ -0.97
LSP1YPL004C SNA3P14359 133 aa8.99□□□□□ -0.97
LSP1YPL004C GSY1P23337 708 aa8.99□□□□□ -0.97
LSP1YPL004C MBR1P23493 339 aa8.99□□□□□ -0.97
LSP1YPL004C KIN82P25341 720 aa8.99□□□□□ -0.97
LSP1YPL004C SUV3P32580 737 aa8.99□□□□□ -0.97
LSP1YPL004C BRE2P43132 505 aa8.99□□□□□ -0.97
LSP1YPL004C YFL040WP43562 540 aa8.99□□□□□ -0.97
LSP1YPL004C YGR153WP48238 217 aa8.99□□□□□ -0.97
LSP1YPL004C MSC2Q03455 724 aa8.99□□□□□ -0.97
LSP1YPL004C FUS2Q05670 677 aa8.99□□□□□ -0.97
LSP1YPL004C CRD1Q07560 283 aa8.99□□□□□ -0.97
LSP1YPL004C YLL058WQ12198 575 aa8.99□□□□□ -0.97
LSP1YPL004C MAS2P11914 482 aa8.98□□□□□ -0.97
LSP1YPL004C CLN3P13365 580 aa8.98□□□□□ -0.97
LSP1YPL004C YEL025CP39991 1188 aa8.98□□□□□ -0.97
LSP1YPL004C DAK2P43550 591 aa8.98□□□□□ -0.97
LSP1YPL004C ROG3P43602 733 aa8.98□□□□□ -0.97
LSP1YPL004C MDR1P53258 950 aa8.98□□□□□ -0.97
LSP1YPL004C SDA1P53313 767 aaKnown RBP8.98□□□□□ -0.97
LSP1YPL004C LSP1Q12230 341 aaKnown RBP8.98□□□□□ -0.97
LSP1YPL004C SMC6Q12749 1114 aa8.98□□□□□ -0.97
LSP1YPL004C SUP45P12385 437 aaKnown RBP8.97□□□□□ -0.97
LSP1YPL004C PRP22P24384 1145 aaKnown RBP8.97□□□□□ -0.97
LSP1YPL004C URA1P28272 314 aaPredicted RBP8.97□□□□□ -0.97
LSP1YPL004C KTR2P33550 425 aa8.97□□□□□ -0.97
LSP1YPL004C WHI3P34761 661 aaKnown RBP8.97□□□□□ -0.97
LSP1YPL004C BDH2P39713 417 aa8.97□□□□□ -0.97
LSP1YPL004C FIR1P40020 876 aa8.97□□□□□ -0.97
LSP1YPL004C FIS1P40515 155 aa8.97□□□□□ -0.97
LSP1YPL004C THI6P41835 540 aa8.97□□□□□ -0.97
LSP1YPL004C CLA4P48562 842 aa8.97□□□□□ -0.97
LSP1YPL004C DIP5P53388 608 aa8.97□□□□□ -0.97
LSP1YPL004C ATG11Q12527 1178 aa8.97□□□□□ -0.97
LSP1YPL004C RIF1P29539 1916 aa8.97□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms