RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeastyeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NFI1YOR156C EAF1Q06337 982 aa6.85□□□□□ -1.31
NFI1YOR156C NNK1P36003 928 aa6.85□□□□□ -1.31
NFI1YOR156C GPT2P36148 743 aa6.85□□□□□ -1.31
NFI1YOR156C UTP8P53276 713 aaKnown RBP6.85□□□□□ -1.31
NFI1YOR156C HSP60P19882 572 aaKnown RBP6.84□□□□□ -1.31
NFI1YOR156C KIP1P28742 1111 aa6.84□□□□□ -1.31
NFI1YOR156C TIM23P32897 222 aa6.84□□□□□ -1.31
NFI1YOR156C SMY2P32909 740 aaKnown RBP6.84□□□□□ -1.31
NFI1YOR156C RRP14P36080 434 aaKnown RBP6.84□□□□□ -1.31
NFI1YOR156C SNF7P39929 240 aaKnown RBP6.84□□□□□ -1.31
NFI1YOR156C NUP82P40368 713 aa6.84□□□□□ -1.31
NFI1YOR156C ERP6P53198 216 aa6.84□□□□□ -1.31
NFI1YOR156C YPL260WQ08977 551 aa6.84□□□□□ -1.31
NFI1YOR156C AI3P03877 415 aa6.84□□□□□ -1.32
NFI1YOR156C YLR257WQ06146 321 aaKnown RBP6.84□□□□□ -1.32
NFI1YOR156C TDA6Q06466 467 aa6.84□□□□□ -1.32
NFI1YOR156C CAN1P04817 590 aa6.83□□□□□ -1.32
NFI1YOR156C YER152CP10356 443 aa6.83□□□□□ -1.32
NFI1YOR156C NFS1P25374 497 aa6.83□□□□□ -1.32
NFI1YOR156C MCX1P38323 520 aaPredicted RBP6.83□□□□□ -1.32
NFI1YOR156C THI72Q08579 599 aa6.83□□□□□ -1.32
NFI1YOR156C CIT1P00890 479 aa6.82□□□□□ -1.32
NFI1YOR156C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
NFI1YOR156C ALT1P52893 592 aa6.82□□□□□ -1.32
NFI1YOR156C TAF8Q03750 510 aa6.82□□□□□ -1.32
NFI1YOR156C DBP2P24783 546 aaKnown RBP6.81□□□□□ -1.32
NFI1YOR156C UBX5Q06682 500 aa6.81□□□□□ -1.32
NFI1YOR156C PRP9P19736 530 aaKnown RBP6.81□□□□□ -1.32
NFI1YOR156C ARE1P25628 610 aa6.81□□□□□ -1.32
NFI1YOR156C NMD3P38861 518 aaKnown RBP6.81□□□□□ -1.32
NFI1YOR156C PNT1P38969 423 aa6.81□□□□□ -1.32
NFI1YOR156C SPO21Q12411 609 aa6.81□□□□□ -1.32
NFI1YOR156C RPL11AP0C0W9 174 aaKnown RBP6.8□□□□□ -1.32
NFI1YOR156C MDJ1P35191 511 aa6.8□□□□□ -1.32
NFI1YOR156C GGA2P38817 585 aaKnown RBP6.8□□□□□ -1.32
NFI1YOR156C GPB2P39717 880 aa6.8□□□□□ -1.32
NFI1YOR156C ALR2P43553 858 aa6.8□□□□□ -1.32
NFI1YOR156C RPL11BQ3E757 174 aaPredicted RBP6.8□□□□□ -1.32
NFI1YOR156C ERR1P0CX10 437 aa6.79□□□□□ -1.32
NFI1YOR156C ERR2P0CX11 437 aa6.79□□□□□ -1.32
NFI1YOR156C HBS1P32769 611 aaKnown RBP6.79□□□□□ -1.32
NFI1YOR156C YJL045WP47052 634 aa6.79□□□□□ -1.32
NFI1YOR156C YPL062WQ02781 134 aa6.79□□□□□ -1.32
NFI1YOR156C SPP382Q06411 708 aaPredicted RBP6.79□□□□□ -1.32
NFI1YOR156C MET6P05694 767 aaKnown RBP6.78□□□□□ -1.32
NFI1YOR156C PHO8P11491 566 aa6.78□□□□□ -1.32
NFI1YOR156C GAL11P19659 1081 aa6.78□□□□□ -1.32
NFI1YOR156C RSC6P25632 483 aa6.78□□□□□ -1.32
NFI1YOR156C PRY1P47032 299 aa6.78□□□□□ -1.32
NFI1YOR156C ARI1P53111 347 aaKnown RBP6.78□□□□□ -1.32
NFI1YOR156C EAR1Q03212 550 aa6.78□□□□□ -1.32
NFI1YOR156C YLR125WQ12138 136 aa6.78□□□□□ -1.32
NFI1YOR156C RPS4AP0CX35 261 aaKnown RBP6.78□□□□□ -1.32
NFI1YOR156C RPS4BP0CX36 261 aaKnown RBP6.78□□□□□ -1.32
NFI1YOR156C MXR1P40029 184 aa6.78□□□□□ -1.32
NFI1YOR156C HUL4P40985 892 aa6.78□□□□□ -1.32
NFI1YOR156C PUS7Q08647 676 aaKnown RBP6.78□□□□□ -1.32
NFI1YOR156C HRK1Q08732 759 aaKnown RBP6.78□□□□□ -1.32
NFI1YOR156C BET3P36149 193 aa6.77□□□□□ -1.33
NFI1YOR156C RPN3P40016 523 aaKnown RBP6.77□□□□□ -1.33
NFI1YOR156C RTA1P53047 317 aa6.77□□□□□ -1.33
NFI1YOR156C NSG2P53898 299 aa6.77□□□□□ -1.33
NFI1YOR156C GIC2Q06648 383 aa6.77□□□□□ -1.33
NFI1YOR156C YDR215CQ12240 137 aa6.77□□□□□ -1.33
NFI1YOR156C YCK2P23292 546 aaKnown RBP6.76□□□□□ -1.33
NFI1YOR156C GUS1P46655 708 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
NFI1YOR156C TPP1Q03796 238 aa6.76□□□□□ -1.33
NFI1YOR156C YSC84P32793 468 aa6.75□□□□□ -1.33
NFI1YOR156C SLN1P39928 1220 aaPredicted RBP6.75□□□□□ -1.33
NFI1YOR156C HOS3Q02959 697 aaKnown RBP6.75□□□□□ -1.33
NFI1YOR156C HBN1Q96VH4 193 aa6.75□□□□□ -1.33
NFI1YOR156C BAP2P38084 609 aa6.75□□□□□ -1.33
NFI1YOR156C YFL054CP43549 646 aa6.75□□□□□ -1.33
NFI1YOR156C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
NFI1YOR156C NAM7P30771 971 aaKnown RBP6.74□□□□□ -1.33
NFI1YOR156C FPR3P38911 411 aaKnown RBP6.74□□□□□ -1.33
NFI1YOR156C SIT1P39980 628 aa6.74□□□□□ -1.33
NFI1YOR156C YDR306CQ06640 478 aa6.74□□□□□ -1.33
NFI1YOR156C RCL1Q08096 367 aaPredicted RBP6.74□□□□□ -1.33
NFI1YOR156C SNF5P18480 905 aa6.73□□□□□ -1.33
NFI1YOR156C SLA2P33338 968 aa6.73□□□□□ -1.33
NFI1YOR156C CCC2P38995 1004 aa6.73□□□□□ -1.33
NFI1YOR156C YMR187CQ03236 431 aa6.73□□□□□ -1.33
NFI1YOR156C ACM1Q08981 209 aa6.73□□□□□ -1.33
NFI1YOR156C TOP3P13099 656 aa6.72□□□□□ -1.33
NFI1YOR156C THI4P32318 326 aa6.72□□□□□ -1.33
NFI1YOR156C MNN1P39106 762 aa6.72□□□□□ -1.33
NFI1YOR156C GEM1P39722 662 aa6.72□□□□□ -1.33
NFI1YOR156C YDL124WQ07551 312 aaKnown RBP6.72□□□□□ -1.33
NFI1YOR156C YVC1Q12324 675 aa6.72□□□□□ -1.33
NFI1YOR156C SAM35P14693 329 aa6.71□□□□□ -1.33
NFI1YOR156C YKL151CP36059 337 aa6.71□□□□□ -1.33
NFI1YOR156C UGA2P38067 497 aa6.71□□□□□ -1.33
NFI1YOR156C MMM1P41800 426 aa6.71□□□□□ -1.33
NFI1YOR156C MAL11P53048 616 aa6.71□□□□□ -1.33
NFI1YOR156C DUS3Q06053 668 aaKnown RBP6.71□□□□□ -1.33
NFI1YOR156C CDC11P32458 415 aa6.71□□□□□ -1.34
NFI1YOR156C YBR284WP38150 797 aa6.71□□□□□ -1.34
NFI1YOR156C SKN7P38889 622 aa6.71□□□□□ -1.34
NFI1YOR156C AKR1P39010 764 aa6.71□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms