RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C SYP1P25623 870 aaKnown RBP5.59□□□□□ -1.51
VPS21YOR089C PUB1P32588 453 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51 RIP-Chip
VPS21YOR089C ABD1P32783 436 aaPredicted RBP5.59□□□□□ -1.51
VPS21YOR089C EXO5P38289 585 aa5.59□□□□□ -1.51
VPS21YOR089C HXT13P39924 564 aa5.59□□□□□ -1.51
VPS21YOR089C TPO2P53283 614 aa5.59□□□□□ -1.51
VPS21YOR089C HXT17P53631 564 aa5.59□□□□□ -1.51
VPS21YOR089C HXT15P54854 567 aa5.59□□□□□ -1.51
VPS21YOR089C RKM2Q03942 479 aa5.59□□□□□ -1.51
VPS21YOR089C FMP25Q08023 583 aa5.59□□□□□ -1.51
VPS21YOR089C YLL054CQ12244 843 aa5.59□□□□□ -1.51
VPS21YOR089C SSB1P11484 613 aaKnown RBP5.58□□□□□ -1.52
VPS21YOR089C MKK2P32491 506 aa5.58□□□□□ -1.52
VPS21YOR089C YKL107WP34251 309 aa5.58□□□□□ -1.52
VPS21YOR089C SSB2P40150 613 aaKnown RBP5.58□□□□□ -1.52
VPS21YOR089C NEO1P40527 1151 aa5.58□□□□□ -1.52
VPS21YOR089C IRC24P40580 263 aa5.58□□□□□ -1.52
VPS21YOR089C CNN1P43618 361 aa5.58□□□□□ -1.52
VPS21YOR089C AVT1P47082 602 aa5.58□□□□□ -1.52
VPS21YOR089C UTP8P53276 713 aaKnown RBP5.58□□□□□ -1.52
VPS21YOR089C YNR065CP53751 1116 aa5.58□□□□□ -1.52
VPS21YOR089C YLR225CQ05948 407 aaKnown RBP5.58□□□□□ -1.52
VPS21YOR089C YDL124WQ07551 312 aaKnown RBP5.58□□□□□ -1.52
VPS21YOR089C BRE4Q07660 1125 aa5.58□□□□□ -1.52
VPS21YOR089C YIG1Q08956 461 aa5.58□□□□□ -1.52
VPS21YOR089C CAN1P04817 590 aa5.57□□□□□ -1.52
VPS21YOR089C DED1P06634 604 aaKnown RBP5.57□□□□□ -1.52
VPS21YOR089C INO1P11986 533 aa5.57□□□□□ -1.52
VPS21YOR089C ERS1P17261 260 aa5.57□□□□□ -1.52
VPS21YOR089C LIP5P32875 414 aa5.57□□□□□ -1.52
VPS21YOR089C STE5P32917 917 aa5.57□□□□□ -1.52
VPS21YOR089C SEA4P38164 1038 aa5.57□□□□□ -1.52
VPS21YOR089C GEM1P39722 662 aa5.57□□□□□ -1.52
VPS21YOR089C SPO74P45819 413 aa5.57□□□□□ -1.52
VPS21YOR089C ROD1Q02805 837 aa5.57□□□□□ -1.52
VPS21YOR089C HAS1Q03532 505 aaKnown RBP5.57□□□□□ -1.52
VPS21YOR089C LAP2Q10740 671 aa5.57□□□□□ -1.52
VPS21YOR089C ELG1Q12050 791 aa5.57□□□□□ -1.52
VPS21YOR089C TOP1P04786 769 aa5.56□□□□□ -1.52
VPS21YOR089C HEM13P11353 328 aaKnown RBP5.56□□□□□ -1.52
VPS21YOR089C DBP5P20449 482 aaKnown RBP5.56□□□□□ -1.52
VPS21YOR089C SFP1P32432 683 aa5.56□□□□□ -1.52
VPS21YOR089C CDC11P32458 415 aa5.56□□□□□ -1.52
VPS21YOR089C MAE1P36013 669 aaKnown RBP5.56□□□□□ -1.52
VPS21YOR089C YJR142WP47173 342 aa5.56□□□□□ -1.52
VPS21YOR089C GCV1P48015 400 aa5.56□□□□□ -1.52
VPS21YOR089C HNT2P49775 206 aa5.56□□□□□ -1.52
VPS21YOR089C SPO71Q03868 1245 aa5.56□□□□□ -1.52
VPS21YOR089C NOP14Q99207 810 aaKnown RBP5.56□□□□□ -1.52
VPS21YOR089C HSL1P34244 1518 aa5.55□□□□□ -1.52
VPS21YOR089C CYC7P00045 113 aa5.55□□□□□ -1.52
VPS21YOR089C MCM7P38132 845 aa5.55□□□□□ -1.52
VPS21YOR089C HSE1P38753 452 aa5.55□□□□□ -1.52
VPS21YOR089C ALR2P43553 858 aa5.55□□□□□ -1.52
VPS21YOR089C PFD1P46988 109 aa5.55□□□□□ -1.52
VPS21YOR089C TIF35Q04067 274 aaKnown RBP5.55□□□□□ -1.52
VPS21YOR089C UTP5Q04177 643 aaKnown RBP5.55□□□□□ -1.52
VPS21YOR089C SRM1P21827 482 aa5.54□□□□□ -1.52
VPS21YOR089C GRX4P32642 244 aa5.54□□□□□ -1.52
VPS21YOR089C KIP3P53086 805 aaKnown RBP5.54□□□□□ -1.52
VPS21YOR089C RTS3P53289 263 aa5.54□□□□□ -1.52
VPS21YOR089C MEC3Q02574 474 aa5.54□□□□□ -1.52
VPS21YOR089C UBX5Q06682 500 aa5.54□□□□□ -1.52
VPS21YOR089C TY1A-LR4P0C2I8 440 aaKnown RBP5.53□□□□□ -1.52
VPS21YOR089C TY1A-DR6P0CX70 440 aa5.53□□□□□ -1.52
VPS21YOR089C TY1A-ER1P0CX71 440 aa5.53□□□□□ -1.52
VPS21YOR089C TY1A-LR2P0CX72 440 aa5.53□□□□□ -1.52
VPS21YOR089C TY1A-PLP0CX73 440 aa5.53□□□□□ -1.52
VPS21YOR089C TY1A-JR1P0CX74 440 aa5.53□□□□□ -1.52
VPS21YOR089C TY1A-LR3P0CX75 440 aa5.53□□□□□ -1.52
VPS21YOR089C TY1A-ML2P0CX76 440 aa5.53□□□□□ -1.52
VPS21YOR089C MSH2P25847 964 aa5.53□□□□□ -1.52
VPS21YOR089C MOT2P34909 587 aaKnown RBP5.53□□□□□ -1.52
VPS21YOR089C RGD1P38339 666 aa5.53□□□□□ -1.52
VPS21YOR089C NEM1P38757 446 aa5.53□□□□□ -1.52
VPS21YOR089C CRP1P38845 465 aaKnown RBP5.53□□□□□ -1.52
VPS21YOR089C NOP2P40991 618 aaKnown RBP5.53□□□□□ -1.52
VPS21YOR089C YGL176CP46945 554 aa5.53□□□□□ -1.52
VPS21YOR089C VPS53P47061 822 aa5.53□□□□□ -1.52
VPS21YOR089C UGO1Q03327 502 aa5.53□□□□□ -1.52
VPS21YOR089C TAF8Q03750 510 aa5.53□□□□□ -1.52
VPS21YOR089C TY1A-GR1Q12085 440 aa5.53□□□□□ -1.52
VPS21YOR089C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.53□□□□□ -1.52
VPS21YOR089C TY1A-OLQ92392 440 aaKnown RBP5.53□□□□□ -1.52
VPS21YOR089C SWR1Q05471 1514 aa5.53□□□□□ -1.52
VPS21YOR089C ERR1P0CX10 437 aa5.52□□□□□ -1.53
VPS21YOR089C ERR2P0CX11 437 aa5.52□□□□□ -1.53
VPS21YOR089C REI1P38344 393 aaPredicted RBP5.52□□□□□ -1.53
VPS21YOR089C ESC2Q06340 456 aa5.52□□□□□ -1.53
VPS21YOR089C GNT1Q12096 491 aa5.52□□□□□ -1.53
VPS21YOR089C SLS1P42900 643 aa5.51□□□□□ -1.53
VPS21YOR089C HSV2P50079 448 aaPredicted RBP5.51□□□□□ -1.53
VPS21YOR089C AOS1Q06624 347 aa5.51□□□□□ -1.53
VPS21YOR089C AVO1Q08236 1176 aa5.51□□□□□ -1.53
VPS21YOR089C PTC5Q12511 572 aa5.51□□□□□ -1.53
VPS21YOR089C SPT6P23615 1451 aaKnown RBP5.51□□□□□ -1.53
VPS21YOR089C MSB1P21339 1137 aaKnown RBP5.5□□□□□ -1.53
VPS21YOR089C PUF4P25339 888 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53 RIP-Chip
VPS21YOR089C CCC2P38995 1004 aa5.5□□□□□ -1.53
VPS21YOR089C UBP12P39538 1254 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 99.7 ms