RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C RNR3P21672 869 aaKnown RBP5.84□□□□□ -1.47
RAT1YOR048C HIR1P32479 840 aa5.84□□□□□ -1.47
RAT1YOR048C ISW1P38144 1129 aa5.84□□□□□ -1.47
RAT1YOR048C RPG1P38249 964 aaKnown RBP5.84□□□□□ -1.47
RAT1YOR048C RMP1Q12530 201 aa5.84□□□□□ -1.47
RAT1YOR048C BMH1P29311 267 aaKnown RBP5.83□□□□□ -1.48
RAT1YOR048C JNM1P36224 373 aa5.83□□□□□ -1.48
RAT1YOR048C CCT2P39076 527 aaKnown RBP5.83□□□□□ -1.48
RAT1YOR048C IOC3P43596 787 aa5.83□□□□□ -1.48
RAT1YOR048C UTP5Q04177 643 aaKnown RBP5.83□□□□□ -1.48
RAT1YOR048C DPH6Q12429 685 aa5.83□□□□□ -1.48
RAT1YOR048C ARG82P07250 355 aa5.83□□□□□ -1.48
RAT1YOR048C ERG11P10614 530 aa5.83□□□□□ -1.48
RAT1YOR048C SEC23P15303 768 aaKnown RBP5.83□□□□□ -1.48
RAT1YOR048C TRK2P28584 889 aa5.83□□□□□ -1.48
RAT1YOR048C SPC110P32380 944 aa5.83□□□□□ -1.48
RAT1YOR048C MUD2P36084 527 aaKnown RBP5.83□□□□□ -1.48
RAT1YOR048C EFM2P38347 419 aa5.83□□□□□ -1.48
RAT1YOR048C VPS8P39702 1274 aa5.83□□□□□ -1.48
RAT1YOR048C GAS5Q08193 484 aa5.83□□□□□ -1.48
RAT1YOR048C SLK19Q08581 821 aaKnown RBP5.83□□□□□ -1.48
RAT1YOR048C PMD1P32634 1753 aa5.83□□□□□ -1.48
RAT1YOR048C PIF1P07271 859 aa5.82□□□□□ -1.48
RAT1YOR048C OM45P16547 393 aa5.82□□□□□ -1.48
RAT1YOR048C SRP54P20424 541 aaKnown RBP5.82□□□□□ -1.48
RAT1YOR048C CHS3P29465 1165 aa5.82□□□□□ -1.48
RAT1YOR048C SMC1P32908 1225 aa5.82□□□□□ -1.48
RAT1YOR048C HEL1P36113 551 aa5.82□□□□□ -1.48
RAT1YOR048C PBP2P38151 413 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
RAT1YOR048C NPR2P39923 615 aa5.82□□□□□ -1.48
RAT1YOR048C ATG32P40458 529 aa5.82□□□□□ -1.48
RAT1YOR048C YNL320WP42840 284 aa5.82□□□□□ -1.48
RAT1YOR048C RPT6Q01939 405 aaKnown RBP5.82□□□□□ -1.48
RAT1YOR048C GDE1Q02979 1223 aa5.82□□□□□ -1.48
RAT1YOR048C YLH47Q06493 454 aa5.82□□□□□ -1.48
RAT1YOR048C LAM6Q08001 693 aa5.82□□□□□ -1.48
RAT1YOR048C ACM1Q08981 209 aa5.82□□□□□ -1.48
RAT1YOR048C KAR3P17119 729 aa5.82□□□□□ -1.48
RAT1YOR048C PIH1P38768 344 aa5.82□□□□□ -1.48
RAT1YOR048C YGL138CP53122 345 aa5.82□□□□□ -1.48
RAT1YOR048C ZPR1P53303 486 aaKnown RBP5.82□□□□□ -1.48
RAT1YOR048C SAS4Q04003 481 aa5.82□□□□□ -1.48
RAT1YOR048C MYO5Q04439 1219 aaKnown RBP5.82□□□□□ -1.48
RAT1YOR048C PNP1Q05788 311 aa5.82□□□□□ -1.48
RAT1YOR048C TOP1P04786 769 aa5.82□□□□□ -1.48
RAT1YOR048C PRP16P15938 1071 aaPredicted RBP5.82□□□□□ -1.48
RAT1YOR048C SAM2P19358 384 aaKnown RBP5.82□□□□□ -1.48
RAT1YOR048C RPL8BP29453 256 aaKnown RBP5.82□□□□□ -1.48
RAT1YOR048C SIC1P38634 284 aa5.82□□□□□ -1.48
RAT1YOR048C UBP5P39944 805 aa5.82□□□□□ -1.48
RAT1YOR048C NMD5P46970 1048 aa5.82□□□□□ -1.48
RAT1YOR048C UBX4P54730 416 aa5.82□□□□□ -1.48
RAT1YOR048C RTS1P38903 757 aa5.81□□□□□ -1.48
RAT1YOR048C YGR153WP48238 217 aa5.81□□□□□ -1.48
RAT1YOR048C DSE4P53753 1117 aa5.81□□□□□ -1.48
RAT1YOR048C ALG1P16661 449 aa5.81□□□□□ -1.48
RAT1YOR048C SRB4P32569 687 aa5.81□□□□□ -1.48
RAT1YOR048C NIP100P33420 868 aa5.81□□□□□ -1.48
RAT1YOR048C LAS1P36146 502 aaPredicted RBP5.81□□□□□ -1.48
RAT1YOR048C UGA2P38067 497 aa5.81□□□□□ -1.48
RAT1YOR048C YBR062CP38239 180 aa5.81□□□□□ -1.48
RAT1YOR048C KAP123P40069 1113 aaKnown RBP5.81□□□□□ -1.48
RAT1YOR048C YDL057WQ07379 328 aa5.81□□□□□ -1.48
RAT1YOR048C MPC54Q08550 464 aa5.81□□□□□ -1.48
RAT1YOR048C ISY1P21374 235 aaPredicted RBP5.8□□□□□ -1.48
RAT1YOR048C MLS1P30952 554 aa5.8□□□□□ -1.48
RAT1YOR048C RRP1P35178 278 aaPredicted RBP5.8□□□□□ -1.48
RAT1YOR048C BYE1P36106 594 aa5.8□□□□□ -1.48
RAT1YOR048C BIM1P40013 344 aa5.8□□□□□ -1.48
RAT1YOR048C EMP47P43555 445 aa5.8□□□□□ -1.48
RAT1YOR048C YFH7P43591 353 aa5.8□□□□□ -1.48
RAT1YOR048C GUP1P53154 560 aa5.8□□□□□ -1.48
RAT1YOR048C VPS30Q02948 557 aa5.8□□□□□ -1.48
RAT1YOR048C USA1Q03714 838 aa5.8□□□□□ -1.48
RAT1YOR048C NCR1Q12200 1170 aa5.8□□□□□ -1.48
RAT1YOR048C YEL076C-AP0CX16 216 aa5.8□□□□□ -1.48
RAT1YOR048C YLR464WP0CX17 216 aa5.8□□□□□ -1.48
RAT1YOR048C RPS7AP26786 190 aaKnown RBP5.8□□□□□ -1.48
RAT1YOR048C KRE2P27809 442 aa5.8□□□□□ -1.48
RAT1YOR048C NAM7P30771 971 aaKnown RBP5.8□□□□□ -1.48
RAT1YOR048C SWH1P35845 1188 aa5.8□□□□□ -1.48
RAT1YOR048C YEL076CP39971 216 aa5.8□□□□□ -1.48
RAT1YOR048C TRS85P46944 698 aa5.8□□□□□ -1.48
RAT1YOR048C YJL181WP46987 611 aa5.8□□□□□ -1.48
RAT1YOR048C TAF9Q05027 157 aa5.8□□□□□ -1.48
RAT1YOR048C BDF2Q07442 638 aa5.8□□□□□ -1.48
RAT1YOR048C YPL260WQ08977 551 aa5.8□□□□□ -1.48
RAT1YOR048C KEL3Q08979 651 aaPredicted RBP5.8□□□□□ -1.48
RAT1YOR048C CDC8P00572 216 aa5.8□□□□□ -1.48
RAT1YOR048C THR4P16120 514 aaKnown RBP5.8□□□□□ -1.48
RAT1YOR048C YEL1P34225 687 aa5.8□□□□□ -1.48
RAT1YOR048C BUD16P39988 312 aa5.8□□□□□ -1.48
RAT1YOR048C BRO1P48582 844 aa5.8□□□□□ -1.48
RAT1YOR048C CTR1P49573 406 aa5.8□□□□□ -1.48
RAT1YOR048C ATG1P53104 897 aa5.8□□□□□ -1.48
RAT1YOR048C CBK1P53894 756 aa5.8□□□□□ -1.48
RAT1YOR048C UBX2Q04228 584 aa5.8□□□□□ -1.48
RAT1YOR048C ZRT2Q12436 422 aa5.8□□□□□ -1.48
RAT1YOR048C SNF3P10870 884 aa5.79□□□□□ -1.48
RAT1YOR048C SEC8P32855 1065 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms