RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C GNT1Q12096 491 aa10.27□□□□□ -0.77
SPT20YOL148C GFA1P14742 717 aaKnown RBP10.26□□□□□ -0.77
SPT20YOL148C SMC2P38989 1170 aaKnown RBP10.26□□□□□ -0.77
SPT20YOL148C GVP36P40531 326 aaKnown RBP10.26□□□□□ -0.77
SPT20YOL148C IES1P43579 692 aa10.26□□□□□ -0.77
SPT20YOL148C ERP6P53198 216 aa10.26□□□□□ -0.77
SPT20YOL148C MAK10Q02197 733 aa10.26□□□□□ -0.77
SPT20YOL148C DAS2Q12084 232 aa10.26□□□□□ -0.77
SPT20YOL148C RIO1Q12196 484 aaKnown RBP10.26□□□□□ -0.77
SPT20YOL148C NKP1Q12493 238 aa10.26□□□□□ -0.77
SPT20YOL148C PTC5Q12511 572 aa10.26□□□□□ -0.77
SPT20YOL148C BNI1P41832 1953 aa10.26□□□□□ -0.77
SPT20YOL148C YCR051WP25631 222 aa10.26□□□□□ -0.77
SPT20YOL148C HIR1P32479 840 aa10.26□□□□□ -0.77
SPT20YOL148C NIP1P32497 812 aaKnown RBP10.26□□□□□ -0.77
SPT20YOL148C APL2P36000 726 aaPredicted RBP10.26□□□□□ -0.77
SPT20YOL148C REV7P38927 245 aa10.26□□□□□ -0.77
SPT20YOL148C KAP123P40069 1113 aaKnown RBP10.26□□□□□ -0.77
SPT20YOL148C XKS1P42826 600 aa10.26□□□□□ -0.77
SPT20YOL148C SUB1P54000 292 aaKnown RBP10.26□□□□□ -0.77
SPT20YOL148C VPS16Q03308 798 aa10.26□□□□□ -0.77
SPT20YOL148C PIG1Q06216 648 aa10.26□□□□□ -0.77
SPT20YOL148C HIS4P00815 799 aaKnown RBP10.25□□□□□ -0.77
SPT20YOL148C SSA2P10592 639 aaKnown RBP10.25□□□□□ -0.77
SPT20YOL148C LAM1P38851 1228 aa10.25□□□□□ -0.77
SPT20YOL148C BTN2P53286 410 aa10.25□□□□□ -0.77
SPT20YOL148C GIR2Q03768 265 aaPredicted RBP10.25□□□□□ -0.77
SPT20YOL148C TRS120Q04183 1289 aa10.25□□□□□ -0.77
SPT20YOL148C NDL1Q06568 189 aa10.25□□□□□ -0.77
SPT20YOL148C TAL1P15019 335 aaKnown RBP10.24□□□□□ -0.77
SPT20YOL148C STE13P33894 931 aa10.24□□□□□ -0.77
SPT20YOL148C TOM71P38825 639 aaKnown RBP10.24□□□□□ -0.77
SPT20YOL148C INA22P40576 216 aa10.24□□□□□ -0.77
SPT20YOL148C RPT6Q01939 405 aaKnown RBP10.24□□□□□ -0.77
SPT20YOL148C CWC2Q12046 339 aaPredicted RBP10.24□□□□□ -0.77
SPT20YOL148C PYC1P11154 1178 aaKnown RBP10.23□□□□□ -0.77
SPT20YOL148C PRP5P21372 849 aaPredicted RBP10.23□□□□□ -0.77
SPT20YOL148C UBP1P25037 809 aa10.23□□□□□ -0.77
SPT20YOL148C RRP14P36080 434 aaKnown RBP10.23□□□□□ -0.77
SPT20YOL148C TIF4631P39935 952 aaKnown RBP10.23□□□□□ -0.77
SPT20YOL148C MPH1P40562 993 aa10.23□□□□□ -0.77
SPT20YOL148C DAS1P47005 663 aa10.23□□□□□ -0.77
SPT20YOL148C SGM1P47166 707 aa10.23□□□□□ -0.77
SPT20YOL148C RMT2Q03305 412 aa10.23□□□□□ -0.77
SPT20YOL148C TAF9Q05027 157 aa10.23□□□□□ -0.77
SPT20YOL148C ZRT2Q12436 422 aa10.23□□□□□ -0.77
SPT20YOL148C OCA6Q12454 224 aa10.23□□□□□ -0.77
SPT20YOL148C SEG2P34250 1132 aa10.23□□□□□ -0.77
SPT20YOL148C RPC25P35718 212 aa10.23□□□□□ -0.77
SPT20YOL148C FZO1P38297 855 aa10.23□□□□□ -0.77
SPT20YOL148C PPX1P38698 397 aa10.23□□□□□ -0.77
SPT20YOL148C AXL1P40851 1208 aa10.23□□□□□ -0.77
SPT20YOL148C YAP7Q08182 245 aa10.23□□□□□ -0.77
SPT20YOL148C ALR1Q08269 859 aa10.23□□□□□ -0.77
SPT20YOL148C SSP2Q08646 371 aa10.23□□□□□ -0.77
SPT20YOL148C GPN2Q08726 347 aaPredicted RBP10.23□□□□□ -0.77
SPT20YOL148C NCA2Q12374 616 aa10.23□□□□□ -0.77
SPT20YOL148C NUF2P33895 451 aa10.22□□□□□ -0.77
SPT20YOL148C UGA2P38067 497 aa10.22□□□□□ -0.77
SPT20YOL148C YBR062CP38239 180 aa10.22□□□□□ -0.77
SPT20YOL148C BEM4P39011 633 aa10.22□□□□□ -0.77
SPT20YOL148C VID27P40157 782 aa10.22□□□□□ -0.77
SPT20YOL148C ARI1P53111 347 aaKnown RBP10.22□□□□□ -0.77
SPT20YOL148C PCL10P53124 433 aa10.22□□□□□ -0.77
SPT20YOL148C MDR1P53258 950 aa10.22□□□□□ -0.77
SPT20YOL148C RTC4P53850 401 aa10.22□□□□□ -0.77
SPT20YOL148C UBP16Q02863 499 aa10.22□□□□□ -0.77
SPT20YOL148C IMH1Q06704 911 aaKnown RBP10.22□□□□□ -0.77
SPT20YOL148C YPR204WQ08995 1032 aa10.22□□□□□ -0.77
SPT20YOL148C RRI2Q12348 645 aa10.22□□□□□ -0.77
SPT20YOL148C TUP1P16649 713 aa10.21□□□□□ -0.77
SPT20YOL148C ILV6P25605 309 aaKnown RBP10.21□□□□□ -0.77
SPT20YOL148C MVD1P32377 396 aaKnown RBP10.21□□□□□ -0.77
SPT20YOL148C LHS1P36016 881 aa10.21□□□□□ -0.77
SPT20YOL148C ECM4P36156 370 aa10.21□□□□□ -0.77
SPT20YOL148C GRX7P38068 203 aa10.21□□□□□ -0.77
SPT20YOL148C CCM1P48237 864 aaPredicted RBP10.21□□□□□ -0.77
SPT20YOL148C GDE1Q02979 1223 aa10.21□□□□□ -0.77
SPT20YOL148C FCP1Q03254 732 aa10.21□□□□□ -0.77
SPT20YOL148C USA1Q03714 838 aa10.21□□□□□ -0.77
SPT20YOL148C APL1P27351 700 aa10.21□□□□□ -0.78
SPT20YOL148C YNL320WP42840 284 aa10.21□□□□□ -0.78
SPT20YOL148C RPC17P47076 161 aa10.21□□□□□ -0.78
SPT20YOL148C ECI1Q05871 280 aa10.21□□□□□ -0.78
SPT20YOL148C YOR296WQ08748 1289 aa10.21□□□□□ -0.78
SPT20YOL148C FAS2P19097 1887 aaKnown RBP10.2□□□□□ -0.78
SPT20YOL148C TYR1P20049 452 aa10.2□□□□□ -0.78
SPT20YOL148C OSM1P21375 501 aaKnown RBP10.2□□□□□ -0.78
SPT20YOL148C TDA11P38854 504 aa10.2□□□□□ -0.78
SPT20YOL148C SIT1P39980 628 aa10.2□□□□□ -0.78
SPT20YOL148C TDA10P42938 290 aa10.2□□□□□ -0.78
SPT20YOL148C GCN20P43535 752 aaKnown RBP10.2□□□□□ -0.78
SPT20YOL148C KAR5Q04746 504 aa10.2□□□□□ -0.78
SPT20YOL148C SPO75Q07798 868 aa10.2□□□□□ -0.78
SPT20YOL148C CEX1Q12453 761 aa10.2□□□□□ -0.78
SPT20YOL148C ALG1P16661 449 aa10.19□□□□□ -0.78
SPT20YOL148C RPC82P32349 654 aa10.19□□□□□ -0.78
SPT20YOL148C CDC3P32457 520 aaKnown RBP10.19□□□□□ -0.78
SPT20YOL148C SSE1P32589 693 aaKnown RBP10.19□□□□□ -0.78
SPT20YOL148C SEC66P33754 206 aa10.19□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms