RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W AIM46P38885 310 aa2.1□□□□□ -2.07
RTP1YMR185W TPM2P40414 161 aa2.1□□□□□ -2.07
RTP1YMR185W YJR008WP47085 338 aa2.1□□□□□ -2.07
RTP1YMR185W HOS3Q02959 697 aaKnown RBP2.1□□□□□ -2.07
RTP1YMR185W BRE4Q07660 1125 aa2.1□□□□□ -2.07
RTP1YMR185W TY1A-NL1Q12391 440 aaKnown RBP2.1□□□□□ -2.07
RTP1YMR185W TY4B-PA0A0B7P3V8 1104 aa2.1□□□□□ -2.07
RTP1YMR185W MCM2P29469 868 aa2.1□□□□□ -2.07
RTP1YMR185W MAE1P36013 669 aaKnown RBP2.1□□□□□ -2.07
RTP1YMR185W MIC60P36112 540 aa2.1□□□□□ -2.07
RTP1YMR185W YNR029CP53729 429 aaKnown RBP2.1□□□□□ -2.07
RTP1YMR185W YDR306CQ06640 478 aa2.1□□□□□ -2.07
RTP1YMR185W YOL057WQ08225 711 aa2.1□□□□□ -2.07
RTP1YMR185W REC8Q12188 680 aa2.1□□□□□ -2.07
RTP1YMR185W TY4A-HQ6Q5P6 413 aa2.1□□□□□ -2.07
RTP1YMR185W NOP14Q99207 810 aaKnown RBP2.1□□□□□ -2.07
RTP1YMR185W PGM1P33401 570 aaKnown RBP2.09□□□□□ -2.07
RTP1YMR185W RFC1P38630 861 aaKnown RBP2.09□□□□□ -2.07
RTP1YMR185W SPO22P40511 975 aa2.09□□□□□ -2.07
RTP1YMR185W SMC3P47037 1230 aa2.09□□□□□ -2.07
RTP1YMR185W SPO1P53541 631 aa2.09□□□□□ -2.07
RTP1YMR185W RIA1P53893 1110 aa2.09□□□□□ -2.07
RTP1YMR185W VPS20Q04272 221 aa2.09□□□□□ -2.07
RTP1YMR185W COQ4O13525 335 aa2.09□□□□□ -2.08
RTP1YMR185W PET111P08468 800 aa2.09□□□□□ -2.08
RTP1YMR185W CYC8P14922 966 aa2.09□□□□□ -2.08
RTP1YMR185W MSN1P22148 382 aa2.09□□□□□ -2.08
RTP1YMR185W SPC110P32380 944 aa2.09□□□□□ -2.08
RTP1YMR185W SUV3P32580 737 aa2.09□□□□□ -2.08
RTP1YMR185W LTV1P34078 463 aa2.09□□□□□ -2.08
RTP1YMR185W NMD2P38798 1089 aaKnown RBP2.09□□□□□ -2.08
RTP1YMR185W HXT13P39924 564 aa2.09□□□□□ -2.08
RTP1YMR185W DMA2P53924 522 aa2.09□□□□□ -2.08
RTP1YMR185W SDH1Q00711 640 aa2.09□□□□□ -2.08
RTP1YMR185W AOS1Q06624 347 aa2.09□□□□□ -2.08
RTP1YMR185W PEX19Q07418 342 aa2.09□□□□□ -2.08
RTP1YMR185W DDP1Q99321 188 aaKnown RBP2.09□□□□□ -2.08
RTP1YMR185W FAS2P19097 1887 aaKnown RBP2.09□□□□□ -2.08
RTP1YMR185W RPS24AP0CX31 135 aaKnown RBP2.08□□□□□ -2.08
RTP1YMR185W RPS24BP0CX32 135 aaKnown RBP2.08□□□□□ -2.08
RTP1YMR185W RRN6P32786 894 aa2.08□□□□□ -2.08
RTP1YMR185W MRPL10P36520 322 aa2.08□□□□□ -2.08
RTP1YMR185W RFT1P38206 574 aaPredicted RBP2.08□□□□□ -2.08
RTP1YMR185W RIX1P38883 763 aaPredicted RBP2.08□□□□□ -2.08
RTP1YMR185W CCT5P40413 562 aaKnown RBP2.08□□□□□ -2.08
RTP1YMR185W YIL165CP40446 119 aa2.08□□□□□ -2.08
RTP1YMR185W SPO74P45819 413 aa2.08□□□□□ -2.08
RTP1YMR185W VPS60Q03390 229 aa2.08□□□□□ -2.08
RTP1YMR185W NSE3Q05541 303 aa2.08□□□□□ -2.08
RTP1YMR185W PSK2Q08217 1101 aa2.08□□□□□ -2.08
RTP1YMR185W YPL150WQ12152 901 aa2.08□□□□□ -2.08
RTP1YMR185W PDR18P53756 1333 aa2.08□□□□□ -2.08
RTP1YMR185W TPM1P17536 199 aaKnown RBP2.08□□□□□ -2.08
RTP1YMR185W STE11P23561 717 aa2.08□□□□□ -2.08
RTP1YMR185W PUB1P32588 453 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
RTP1YMR185W RAD24P32641 659 aa2.08□□□□□ -2.08
RTP1YMR185W ECM2P38241 364 aaKnown RBP2.08□□□□□ -2.08
RTP1YMR185W NPR3P38742 1146 aa2.08□□□□□ -2.08
RTP1YMR185W SSF1P38789 453 aaPredicted RBP2.08□□□□□ -2.08
RTP1YMR185W HXT8P40886 569 aa2.08□□□□□ -2.08
RTP1YMR185W HXT17P53631 564 aa2.08□□□□□ -2.08
RTP1YMR185W SPO71Q03868 1245 aa2.08□□□□□ -2.08
RTP1YMR185W BMS1Q08965 1183 aaKnown RBP2.08□□□□□ -2.08
RTP1YMR185W ELG1Q12050 791 aa2.08□□□□□ -2.08
RTP1YMR185W YRF1-3P0CX14 1859 aa2.08□□□□□ -2.08
RTP1YMR185W YRF1-7P0CX15 1859 aa2.08□□□□□ -2.08
RTP1YMR185W YRF1-6P53819 1859 aa2.08□□□□□ -2.08
RTP1YMR185W VAS1P07806 1104 aaKnown RBP2.07□□□□□ -2.08
RTP1YMR185W RPL19AP0CX82 189 aaKnown RBP2.07□□□□□ -2.08
RTP1YMR185W RPL19BP0CX83 189 aaPredicted RBP2.07□□□□□ -2.08
RTP1YMR185W MSB1P21339 1137 aaKnown RBP2.07□□□□□ -2.08
RTP1YMR185W KCC4P25389 1037 aa2.07□□□□□ -2.08
RTP1YMR185W MRC1P25588 1096 aa2.07□□□□□ -2.08
RTP1YMR185W POL12P38121 705 aaPredicted RBP2.07□□□□□ -2.08
RTP1YMR185W INP51P40559 946 aaKnown RBP2.07□□□□□ -2.08
RTP1YMR185W MDG1P53885 366 aa2.07□□□□□ -2.08
RTP1YMR185W FAR11P53917 953 aa2.07□□□□□ -2.08
RTP1YMR185W BRE1Q07457 700 aaKnown RBP2.07□□□□□ -2.08
RTP1YMR185W RPL22AP05749 121 aaKnown RBP2.07□□□□□ -2.08
RTP1YMR185W MRP7P12687 371 aa2.07□□□□□ -2.08
RTP1YMR185W ATE1P16639 503 aa2.07□□□□□ -2.08
RTP1YMR185W MBR1P23493 339 aa2.07□□□□□ -2.08
RTP1YMR185W AAP1P37898 856 aaKnown RBP2.07□□□□□ -2.08
RTP1YMR185W ECM21P38167 1117 aaKnown RBP2.07□□□□□ -2.08
RTP1YMR185W RAD55P38953 406 aa2.07□□□□□ -2.08
RTP1YMR185W PEX14P53112 341 aa2.07□□□□□ -2.08
RTP1YMR185W MAK10Q02197 733 aa2.07□□□□□ -2.08
RTP1YMR185W APC11Q12157 165 aa2.07□□□□□ -2.08
RTP1YMR185W RIM15P43565 1770 aa2.07□□□□□ -2.08
RTP1YMR185W FUS1P11710 512 aa2.07□□□□□ -2.08
RTP1YMR185W PRX1P34227 261 aaKnown RBP2.07□□□□□ -2.08
RTP1YMR185W YHL017WP38745 532 aa2.07□□□□□ -2.08
RTP1YMR185W TFG2P41896 400 aaPredicted RBP2.07□□□□□ -2.08
RTP1YMR185W YPT11P48559 417 aa2.07□□□□□ -2.08
RTP1YMR185W DNM1P54861 757 aa2.07□□□□□ -2.08
RTP1YMR185W NOP8Q08287 484 aaPredicted RBP2.07□□□□□ -2.08
RTP1YMR185W RIM20Q12033 661 aa2.07□□□□□ -2.08
RTP1YMR185W YOL087CQ99247 1116 aa2.07□□□□□ -2.08
RTP1YMR185W FRS2P15625 503 aaKnown RBP2.06□□□□□ -2.08
RTP1YMR185W SSA4P22202 642 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 86.8 ms