RNA–Protein interactions for RNA: YMR154C

RIM13, Transcript of Calpain-like cysteine protease, yeast

Gene RIM13, Length 2,184 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM13	YMR154C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
RIM13	YMR154C	RRP14	P36080	434 aa	Known RBP	4.16	□□□□□ -1.74
RIM13	YMR154C	PBY1	P38254	753 aa		4.16	□□□□□ -1.74
RIM13	YMR154C	ATG14	P38270	344 aa		4.16	□□□□□ -1.74
RIM13	YMR154C	MCX1	P38323	520 aa	Predicted RBP	4.16	□□□□□ -1.74
RIM13	YMR154C	QNS1	P38795	714 aa	Known RBP	4.16	□□□□□ -1.74
RIM13	YMR154C	UTP8	P53276	713 aa	Known RBP	4.16	□□□□□ -1.74
RIM13	YMR154C	YLR257W	Q06146	321 aa	Known RBP	4.16	□□□□□ -1.74
RIM13	YMR154C	YLL054C	Q12244	843 aa		4.16	□□□□□ -1.74
RIM13	YMR154C	NFS1	P25374	497 aa		4.15	□□□□□ -1.75
RIM13	YMR154C	TIM23	P32897	222 aa		4.15	□□□□□ -1.75
RIM13	YMR154C	YKL107W	P34251	309 aa		4.15	□□□□□ -1.75
RIM13	YMR154C	AKR1	P39010	764 aa		4.15	□□□□□ -1.75
RIM13	YMR154C	YJL045W	P47052	634 aa		4.15	□□□□□ -1.75
RIM13	YMR154C	UBX5	Q06682	500 aa		4.15	□□□□□ -1.75
RIM13	YMR154C	CAN1	P04817	590 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	BRN1	P38170	754 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	CHZ1	P40019	153 aa	Predicted RBP	4.14	□□□□□ -1.75
RIM13	YMR154C	NUP82	P40368	713 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	OSW7	P43611	510 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	VPS53	P47061	822 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	HNT2	P49775	206 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	TAF8	Q03750	510 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	SPO75	Q07798	868 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	GNT1	Q12096	491 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	YOR131C	Q12486	218 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	SFA1	P32771	386 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	MXR1	P40029	184 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	YGR125W	P53273	1036 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	RCL1	Q08096	367 aa	Predicted RBP	4.14	□□□□□ -1.75
RIM13	YMR154C	LAP2	Q10740	671 aa		4.14	□□□□□ -1.75
RIM13	YMR154C	CIT1	P00890	479 aa		4.13	□□□□□ -1.75
RIM13	YMR154C	ERR1	P0CX10	437 aa		4.13	□□□□□ -1.75
RIM13	YMR154C	ERR2	P0CX11	437 aa		4.13	□□□□□ -1.75
RIM13	YMR154C	HBS1	P32769	611 aa	Known RBP	4.13	□□□□□ -1.75
RIM13	YMR154C	SMY2	P32909	740 aa	Known RBP	4.13	□□□□□ -1.75
RIM13	YMR154C	PNT1	P38969	423 aa		4.13	□□□□□ -1.75
RIM13	YMR154C	KRI1	P42846	591 aa	Known RBP	4.13	□□□□□ -1.75
RIM13	YMR154C	ALT1	P52893	592 aa		4.13	□□□□□ -1.75
RIM13	YMR154C	SPO21	Q12411	609 aa		4.13	□□□□□ -1.75
RIM13	YMR154C	PPG1	P32838	368 aa		4.13	□□□□□ -1.75
RIM13	YMR154C	ERP6	P53198	216 aa		4.13	□□□□□ -1.75
RIM13	YMR154C	YMR187C	Q03236	431 aa		4.13	□□□□□ -1.75
RIM13	YMR154C	EAF1	Q06337	982 aa		4.13	□□□□□ -1.75
RIM13	YMR154C	YPL260W	Q08977	551 aa		4.13	□□□□□ -1.75
RIM13	YMR154C	RPS4A	P0CX35	261 aa	Known RBP	4.12	□□□□□ -1.75
RIM13	YMR154C	RPS4B	P0CX36	261 aa	Known RBP	4.12	□□□□□ -1.75
RIM13	YMR154C	HSP60	P19882	572 aa	Known RBP	4.12	□□□□□ -1.75
RIM13	YMR154C	NNK1	P36003	928 aa		4.12	□□□□□ -1.75
RIM13	YMR154C	BET3	P36149	193 aa		4.12	□□□□□ -1.75
RIM13	YMR154C	RTA1	P53047	317 aa		4.12	□□□□□ -1.75
RIM13	YMR154C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
RIM13	YMR154C	TPP1	Q03796	238 aa		4.12	□□□□□ -1.75
RIM13	YMR154C	OSH2	Q12451	1283 aa		4.12	□□□□□ -1.75
RIM13	YMR154C	RPL11A	P0C0W9	174 aa	Known RBP	4.12	□□□□□ -1.75
RIM13	YMR154C	WHI3	P34761	661 aa	Known RBP	4.12	□□□□□ -1.75
RIM13	YMR154C	ARI1	P53111	347 aa	Known RBP	4.12	□□□□□ -1.75
RIM13	YMR154C	PUS7	Q08647	676 aa	Known RBP	4.12	□□□□□ -1.75
RIM13	YMR154C	RPL11B	Q3E757	174 aa	Predicted RBP	4.12	□□□□□ -1.75
RIM13	YMR154C	RSC6	P25632	483 aa		4.11	□□□□□ -1.75
RIM13	YMR154C	ERT1	P38140	529 aa		4.11	□□□□□ -1.75
RIM13	YMR154C	HSE1	P38753	452 aa		4.11	□□□□□ -1.75
RIM13	YMR154C	MAL11	P53048	616 aa		4.11	□□□□□ -1.75
RIM13	YMR154C	GIC2	Q06648	383 aa		4.11	□□□□□ -1.75
RIM13	YMR154C	YPR053C	Q6Q5F3	151 aa		4.11	□□□□□ -1.75
RIM13	YMR154C	BAP2	P38084	609 aa		4.1	□□□□□ -1.75
RIM13	YMR154C	GGA2	P38817	585 aa	Known RBP	4.1	□□□□□ -1.75
RIM13	YMR154C	SKN7	P38889	622 aa		4.1	□□□□□ -1.75
RIM13	YMR154C	ALR2	P43553	858 aa		4.1	□□□□□ -1.75
RIM13	YMR154C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RIM13	YMR154C	PHO8	P11491	566 aa		4.1	□□□□□ -1.75
RIM13	YMR154C	ARE1	P25628	610 aa		4.1	□□□□□ -1.75
RIM13	YMR154C	AFR1	P33304	620 aa		4.1	□□□□□ -1.75
RIM13	YMR154C	YKL151C	P36059	337 aa		4.1	□□□□□ -1.75
RIM13	YMR154C	RPN3	P40016	523 aa	Known RBP	4.1	□□□□□ -1.75
RIM13	YMR154C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	RIP-Chip
RIM13	YMR154C	BUL2	Q03758	920 aa	Known RBP	4.1	□□□□□ -1.75
RIM13	YMR154C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RIM13	YMR154C	HBN1	Q96VH4	193 aa		4.1	□□□□□ -1.75
RIM13	YMR154C	MET6	P05694	767 aa	Known RBP	4.09	□□□□□ -1.75
RIM13	YMR154C	TOP3	P13099	656 aa		4.09	□□□□□ -1.75
RIM13	YMR154C	SNF5	P18480	905 aa		4.09	□□□□□ -1.75
RIM13	YMR154C	PRP9	P19736	530 aa	Known RBP	4.09	□□□□□ -1.75
RIM13	YMR154C	SLA2	P33338	968 aa		4.09	□□□□□ -1.75
RIM13	YMR154C	TAT1	P38085	619 aa		4.09	□□□□□ -1.75
RIM13	YMR154C	YBR284W	P38150	797 aa		4.09	□□□□□ -1.75
RIM13	YMR154C	SNF7	P39929	240 aa	Known RBP	4.09	□□□□□ -1.75
RIM13	YMR154C	SIT1	P39980	628 aa		4.09	□□□□□ -1.75
RIM13	YMR154C	SPP382	Q06411	708 aa	Predicted RBP	4.09	□□□□□ -1.75
RIM13	YMR154C	YLR125W	Q12138	136 aa		4.09	□□□□□ -1.75
RIM13	YMR154C	GAL11	P19659	1081 aa		4.09	□□□□□ -1.76
RIM13	YMR154C	YVC1	Q12324	675 aa		4.09	□□□□□ -1.76
RIM13	YMR154C	SAM35	P14693	329 aa		4.08	□□□□□ -1.76
RIM13	YMR154C	YSC84	P32793	468 aa		4.08	□□□□□ -1.76
RIM13	YMR154C	PGM1	P33401	570 aa	Known RBP	4.08	□□□□□ -1.76
RIM13	YMR154C	HUL4	P40985	892 aa		4.07	□□□□□ -1.76
RIM13	YMR154C	YDR306C	Q06640	478 aa		4.07	□□□□□ -1.76
RIM13	YMR154C	HRK1	Q08732	759 aa	Known RBP	4.07	□□□□□ -1.76
RIM13	YMR154C	FPR3	P38911	411 aa	Known RBP	4.07	□□□□□ -1.76
RIM13	YMR154C	MNN1	P39106	762 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms