RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C MPH1P40562 993 aa8.63□□□□□ -1.03
ATG17YLR423C TPO2P53283 614 aa8.63□□□□□ -1.03
ATG17YLR423C DSE4P53753 1117 aa8.63□□□□□ -1.03
ATG17YLR423C YPL066WQ12194 479 aa8.63□□□□□ -1.03
ATG17YLR423C TY4A-HQ6Q5P6 413 aa8.63□□□□□ -1.03
ATG17YLR423C YGR045CP53229 120 aa8.62□□□□□ -1.03
ATG17YLR423C ELA1P53861 379 aaPredicted RBP8.62□□□□□ -1.03
ATG17YLR423C SPP382Q06411 708 aaPredicted RBP8.62□□□□□ -1.03
ATG17YLR423C SCT1P32784 759 aa8.61□□□□□ -1.03
ATG17YLR423C GNT1Q12096 491 aa8.61□□□□□ -1.03
ATG17YLR423C CCC2P38995 1004 aa8.6□□□□□ -1.03
ATG17YLR423C MSH4P40965 878 aaPredicted RBP8.6□□□□□ -1.03
ATG17YLR423C KIP3P53086 805 aaKnown RBP8.6□□□□□ -1.03
ATG17YLR423C YOR223WQ12015 292 aa8.6□□□□□ -1.03
ATG17YLR423C TSR4P25040 408 aa8.59□□□□□ -1.03
ATG17YLR423C CDC11P32458 415 aa8.59□□□□□ -1.03
ATG17YLR423C JJJ3P47138 172 aa8.59□□□□□ -1.03
ATG17YLR423C TAF8Q03750 510 aa8.59□□□□□ -1.03
ATG17YLR423C DOT1Q04089 582 aaKnown RBP8.59□□□□□ -1.03
ATG17YLR423C YDR306CQ06640 478 aa8.58□□□□□ -1.04
ATG17YLR423C DPH6Q12429 685 aa8.58□□□□□ -1.04
ATG17YLR423C QNS1P38795 714 aaKnown RBP8.57□□□□□ -1.04
ATG17YLR423C RSA3Q05942 220 aaKnown RBP8.57□□□□□ -1.04
ATG17YLR423C YPL260WQ08977 551 aa8.57□□□□□ -1.04
ATG17YLR423C AAR2P32357 355 aaPredicted RBP8.56□□□□□ -1.04
ATG17YLR423C RRM3P38766 723 aa8.56□□□□□ -1.04
ATG17YLR423C YJR142WP47173 342 aa8.56□□□□□ -1.04
ATG17YLR423C RTA1P53047 317 aa8.56□□□□□ -1.04
ATG17YLR423C SPO21Q12411 609 aa8.56□□□□□ -1.04
ATG17YLR423C RET1P22276 1149 aaKnown RBP8.55□□□□□ -1.04
ATG17YLR423C NNK1P36003 928 aa8.55□□□□□ -1.04
ATG17YLR423C TOM70P07213 617 aaKnown RBP8.54□□□□□ -1.04
ATG17YLR423C KIP1P28742 1111 aa8.54□□□□□ -1.04
ATG17YLR423C PPH3P32345 308 aa8.54□□□□□ -1.04
ATG17YLR423C YGR035CP53222 116 aa8.54□□□□□ -1.04
ATG17YLR423C HPF1Q05164 967 aa8.54□□□□□ -1.04
ATG17YLR423C YLR257WQ06146 321 aaKnown RBP8.54□□□□□ -1.04
ATG17YLR423C SFP1P32432 683 aa8.53□□□□□ -1.04
ATG17YLR423C SIP5P40210 489 aaKnown RBP8.53□□□□□ -1.04
ATG17YLR423C HSV2P50079 448 aaPredicted RBP8.53□□□□□ -1.04
ATG17YLR423C NPL3Q01560 414 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
ATG17YLR423C DUS3Q06053 668 aaKnown RBP8.53□□□□□ -1.04
ATG17YLR423C HRK1Q08732 759 aaKnown RBP8.53□□□□□ -1.04
ATG17YLR423C YDL176WQ12027 708 aa8.53□□□□□ -1.04
ATG17YLR423C YER152CP10356 443 aa8.52□□□□□ -1.05
ATG17YLR423C SRM1P21827 482 aa8.52□□□□□ -1.05
ATG17YLR423C MSH2P25847 964 aa8.52□□□□□ -1.05
ATG17YLR423C BET3P36149 193 aa8.52□□□□□ -1.05
ATG17YLR423C YBR284WP38150 797 aa8.52□□□□□ -1.05
ATG17YLR423C GEM1P39722 662 aa8.52□□□□□ -1.05
ATG17YLR423C YGL081WP53156 320 aa8.52□□□□□ -1.05
ATG17YLR423C YNR014WP53719 212 aa8.52□□□□□ -1.05
ATG17YLR423C HBN1Q96VH4 193 aa8.52□□□□□ -1.05
ATG17YLR423C NOP14Q99207 810 aaKnown RBP8.52□□□□□ -1.05
ATG17YLR423C SMY2P32909 740 aaKnown RBP8.51□□□□□ -1.05
ATG17YLR423C GPB2P39717 880 aa8.51□□□□□ -1.05
ATG17YLR423C BOI2P39969 1040 aa8.51□□□□□ -1.05
ATG17YLR423C HBS1P32769 611 aaKnown RBP8.5□□□□□ -1.05
ATG17YLR423C GPT2P36148 743 aa8.5□□□□□ -1.05
ATG17YLR423C DOM34P33309 386 aa8.49□□□□□ -1.05
ATG17YLR423C NMD3P38861 518 aaKnown RBP8.49□□□□□ -1.05
ATG17YLR423C SRP1Q02821 542 aaKnown RBP8.49□□□□□ -1.05
ATG17YLR423C GIC2Q06648 383 aa8.49□□□□□ -1.05
ATG17YLR423C NTG2Q08214 380 aa8.49□□□□□ -1.05
ATG17YLR423C RPL11AP0C0W9 174 aaKnown RBP8.48□□□□□ -1.05
ATG17YLR423C CRP1P38845 465 aaKnown RBP8.48□□□□□ -1.05
ATG17YLR423C PNT1P38969 423 aa8.48□□□□□ -1.05
ATG17YLR423C GUS1P46655 708 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
ATG17YLR423C DNM1P54861 757 aa8.48□□□□□ -1.05
ATG17YLR423C RPL11BQ3E757 174 aaPredicted RBP8.48□□□□□ -1.05
ATG17YLR423C ADE8P04161 214 aa8.47□□□□□ -1.05
ATG17YLR423C GDH3P39708 457 aa8.47□□□□□ -1.05
ATG17YLR423C YJL045WP47052 634 aa8.47□□□□□ -1.05
ATG17YLR423C NCE103P53615 221 aa8.47□□□□□ -1.05
ATG17YLR423C TPP1Q03796 238 aa8.47□□□□□ -1.05
ATG17YLR423C TY1A-NL1Q12391 440 aaKnown RBP8.47□□□□□ -1.05
ATG17YLR423C TOP3P13099 656 aa8.46□□□□□ -1.06
ATG17YLR423C YRO2P38079 344 aa8.46□□□□□ -1.06
ATG17YLR423C MXR1P40029 184 aa8.46□□□□□ -1.06
ATG17YLR423C UGO1Q03327 502 aa8.46□□□□□ -1.06
ATG17YLR423C YPR071WQ12346 211 aa8.46□□□□□ -1.06
ATG17YLR423C ADR1P07248 1323 aa8.46□□□□□ -1.06
ATG17YLR423C AI1P03875 834 aa8.45□□□□□ -1.06
ATG17YLR423C PEX6P33760 1030 aa8.45□□□□□ -1.06
ATG17YLR423C MSD1P15179 658 aaKnown RBP8.44□□□□□ -1.06
ATG17YLR423C RSC6P25632 483 aa8.44□□□□□ -1.06
ATG17YLR423C GRX4P32642 244 aa8.44□□□□□ -1.06
ATG17YLR423C SAH1P39954 449 aaKnown RBP8.44□□□□□ -1.06
ATG17YLR423C RPN3P40016 523 aaKnown RBP8.44□□□□□ -1.06
ATG17YLR423C UBP6P43593 499 aaKnown RBP8.44□□□□□ -1.06
ATG17YLR423C HOS3Q02959 697 aaKnown RBP8.44□□□□□ -1.06
ATG17YLR423C GAS5Q08193 484 aa8.44□□□□□ -1.06
ATG17YLR423C ACM1Q08981 209 aa8.44□□□□□ -1.06
ATG17YLR423C RPS4AP0CX35 261 aaKnown RBP8.43□□□□□ -1.06
ATG17YLR423C RPS4BP0CX36 261 aaKnown RBP8.43□□□□□ -1.06
ATG17YLR423C SSB1P11484 613 aaKnown RBP8.43□□□□□ -1.06
ATG17YLR423C DBP2P24783 546 aaKnown RBP8.43□□□□□ -1.06
ATG17YLR423C TOM20P35180 183 aa8.43□□□□□ -1.06
ATG17YLR423C PET10P36139 283 aa8.43□□□□□ -1.06
ATG17YLR423C DSS1P39112 969 aa8.43□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms