RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W RTA1P53047 317 aa6.51□□□□□ -1.37
VPS36YLR417W YMR074CQ04773 145 aa6.51□□□□□ -1.37
VPS36YLR417W ALG14P38242 237 aa6.5□□□□□ -1.37
VPS36YLR417W CAF120P53836 1060 aa6.5□□□□□ -1.37
VPS36YLR417W NOP14Q99207 810 aaKnown RBP6.5□□□□□ -1.37
VPS36YLR417W CDC11P32458 415 aa6.5□□□□□ -1.37
VPS36YLR417W MAE1P36013 669 aaKnown RBP6.5□□□□□ -1.37
VPS36YLR417W PGM2P37012 569 aaKnown RBP6.5□□□□□ -1.37
VPS36YLR417W SIP5P40210 489 aaKnown RBP6.5□□□□□ -1.37
VPS36YLR417W YGR045CP53229 120 aa6.5□□□□□ -1.37
VPS36YLR417W ALG6Q12001 544 aaKnown RBP6.5□□□□□ -1.37
VPS36YLR417W GRX4P32642 244 aa6.49□□□□□ -1.37
VPS36YLR417W BET3P36149 193 aa6.49□□□□□ -1.37
VPS36YLR417W TPO2P53283 614 aa6.49□□□□□ -1.37
VPS36YLR417W DNM1P54861 757 aa6.49□□□□□ -1.37
VPS36YLR417W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
VPS36YLR417W YPL260WQ08977 551 aa6.49□□□□□ -1.37
VPS36YLR417W ERS1P17261 260 aa6.48□□□□□ -1.37
VPS36YLR417W DSE4P53753 1117 aa6.48□□□□□ -1.37
VPS36YLR417W HBN1Q96VH4 193 aa6.48□□□□□ -1.37
VPS36YLR417W HBS1P32769 611 aaKnown RBP6.47□□□□□ -1.37
VPS36YLR417W TOM20P35180 183 aa6.47□□□□□ -1.37
VPS36YLR417W QNS1P38795 714 aaKnown RBP6.47□□□□□ -1.37
VPS36YLR417W CCC2P38995 1004 aa6.47□□□□□ -1.37
VPS36YLR417W UGO1Q03327 502 aa6.47□□□□□ -1.37
VPS36YLR417W NHA1Q99271 985 aa6.47□□□□□ -1.37
VPS36YLR417W SSB1P11484 613 aaKnown RBP6.47□□□□□ -1.37
VPS36YLR417W SRM1P21827 482 aa6.47□□□□□ -1.37
VPS36YLR417W NFS1P25374 497 aa6.47□□□□□ -1.37
VPS36YLR417W SSB2P40150 613 aaKnown RBP6.47□□□□□ -1.37
VPS36YLR417W GUS1P46655 708 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
VPS36YLR417W HSV2P50079 448 aaPredicted RBP6.47□□□□□ -1.37
VPS36YLR417W RSA3Q05942 220 aaKnown RBP6.47□□□□□ -1.37
VPS36YLR417W SPP382Q06411 708 aaPredicted RBP6.47□□□□□ -1.37
VPS36YLR417W NTG2Q08214 380 aa6.47□□□□□ -1.37
VPS36YLR417W YOR223WQ12015 292 aa6.47□□□□□ -1.37
VPS36YLR417W UBP12P39538 1254 aa6.46□□□□□ -1.38
VPS36YLR417W GDH3P39708 457 aa6.46□□□□□ -1.38
VPS36YLR417W RET1P22276 1149 aaKnown RBP6.45□□□□□ -1.38
VPS36YLR417W PNT1P38969 423 aa6.45□□□□□ -1.38
VPS36YLR417W GEM1P39722 662 aa6.45□□□□□ -1.38
VPS36YLR417W JJJ3P47138 172 aa6.45□□□□□ -1.38
VPS36YLR417W ELA1P53861 379 aaPredicted RBP6.45□□□□□ -1.38
VPS36YLR417W YDR306CQ06640 478 aa6.45□□□□□ -1.38
VPS36YLR417W CRP1P38845 465 aaKnown RBP6.45□□□□□ -1.38
VPS36YLR417W KIP3P53086 805 aaKnown RBP6.45□□□□□ -1.38
VPS36YLR417W DOT1Q04089 582 aaKnown RBP6.45□□□□□ -1.38
VPS36YLR417W GIC2Q06648 383 aa6.45□□□□□ -1.38
VPS36YLR417W YER152CP10356 443 aa6.44□□□□□ -1.38
VPS36YLR417W KIP1P28742 1111 aa6.44□□□□□ -1.38
VPS36YLR417W AAR2P32357 355 aaPredicted RBP6.44□□□□□ -1.38
VPS36YLR417W SFP1P32432 683 aa6.44□□□□□ -1.38
VPS36YLR417W DOM34P33309 386 aa6.44□□□□□ -1.38
VPS36YLR417W NNK1P36003 928 aa6.44□□□□□ -1.38
VPS36YLR417W SIT1P39980 628 aa6.44□□□□□ -1.38
VPS36YLR417W SPO21Q12411 609 aa6.44□□□□□ -1.38
VPS36YLR417W RPL8AP17076 256 aaKnown RBP6.43□□□□□ -1.38
VPS36YLR417W PEX6P33760 1030 aa6.43□□□□□ -1.38
VPS36YLR417W MAL11P53048 616 aa6.43□□□□□ -1.38
VPS36YLR417W DPH6Q12429 685 aa6.43□□□□□ -1.38
VPS36YLR417W TOM70P07213 617 aaKnown RBP6.42□□□□□ -1.38
VPS36YLR417W RPL11AP0C0W9 174 aaKnown RBP6.42□□□□□ -1.38
VPS36YLR417W TOP3P13099 656 aa6.42□□□□□ -1.38
VPS36YLR417W UBP6P43593 499 aaKnown RBP6.42□□□□□ -1.38
VPS36YLR417W YLR257WQ06146 321 aaKnown RBP6.42□□□□□ -1.38
VPS36YLR417W RPL11BQ3E757 174 aaPredicted RBP6.42□□□□□ -1.38
VPS36YLR417W ADR1P07248 1323 aa6.42□□□□□ -1.38
VPS36YLR417W YBR284WP38150 797 aa6.42□□□□□ -1.38
VPS36YLR417W RPN3P40016 523 aaKnown RBP6.42□□□□□ -1.38
VPS36YLR417W ZDS1P50111 915 aaKnown RBP6.42□□□□□ -1.38
VPS36YLR417W YNR029CP53729 429 aaKnown RBP6.42□□□□□ -1.38
VPS36YLR417W DUS3Q06053 668 aaKnown RBP6.42□□□□□ -1.38
VPS36YLR417W HRK1Q08732 759 aaKnown RBP6.42□□□□□ -1.38
VPS36YLR417W ADE8P04161 214 aa6.41□□□□□ -1.38
VPS36YLR417W DBP2P24783 546 aaKnown RBP6.41□□□□□ -1.38
VPS36YLR417W SMY2P32909 740 aaKnown RBP6.41□□□□□ -1.38
VPS36YLR417W PET10P36139 283 aa6.41□□□□□ -1.38
VPS36YLR417W SRP1Q02821 542 aaKnown RBP6.41□□□□□ -1.38
VPS36YLR417W PPH3P32345 308 aa6.4□□□□□ -1.38
VPS36YLR417W RRM3P38766 723 aa6.4□□□□□ -1.38
VPS36YLR417W YEN1P40028 759 aa6.4□□□□□ -1.38
VPS36YLR417W NCE103P53615 221 aa6.4□□□□□ -1.38
VPS36YLR417W TFB2Q02939 513 aa6.4□□□□□ -1.38
VPS36YLR417W YDL176WQ12027 708 aa6.4□□□□□ -1.38
VPS36YLR417W MDM12Q92328 271 aa6.4□□□□□ -1.38
VPS36YLR417W MSD1P15179 658 aaKnown RBP6.39□□□□□ -1.39
VPS36YLR417W YPR071WQ12346 211 aa6.39□□□□□ -1.39
VPS36YLR417W MXR1P40029 184 aa6.39□□□□□ -1.39
VPS36YLR417W LCD1Q04377 747 aa6.39□□□□□ -1.39
VPS36YLR417W ACM1Q08981 209 aa6.39□□□□□ -1.39
VPS36YLR417W TY1A-NL1Q12391 440 aaKnown RBP6.39□□□□□ -1.39
VPS36YLR417W GPT2P36148 743 aa6.38□□□□□ -1.39
VPS36YLR417W GPB2P39717 880 aa6.38□□□□□ -1.39
VPS36YLR417W GAR1P28007 205 aaKnown RBP6.37□□□□□ -1.39
VPS36YLR417W CDC12P32468 407 aaKnown RBP6.37□□□□□ -1.39
VPS36YLR417W YNL193WP53870 558 aa6.37□□□□□ -1.39
VPS36YLR417W HOS3Q02959 697 aaKnown RBP6.37□□□□□ -1.39
VPS36YLR417W HPF1Q05164 967 aa6.37□□□□□ -1.39
VPS36YLR417W GSY1P23337 708 aa6.36□□□□□ -1.39
VPS36YLR417W SLA2P33338 968 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 84.5 ms