RNA–Protein interactions for RNA: YLR098C

CHA4, Transcript of DNA binding transcriptional activator, yeastyeast

Gene CHA4, Length 1,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHA4YLR098C PEX7P39108 375 aa4.31□□□□□ -1.72
CHA4YLR098C SSY1Q03770 852 aa4.31□□□□□ -1.72
CHA4YLR098C TRE1Q08919 783 aa4.31□□□□□ -1.72
CHA4YLR098C YAR028WP39548 234 aa4.31□□□□□ -1.72
CHA4YLR098C DAK2P43550 591 aa4.31□□□□□ -1.72
CHA4YLR098C MTR4P47047 1073 aaKnown RBP4.31□□□□□ -1.72
CHA4YLR098C ULP1Q02724 621 aa4.31□□□□□ -1.72
CHA4YLR098C UTP5Q04177 643 aaKnown RBP4.31□□□□□ -1.72
CHA4YLR098C WHI5Q12416 295 aa4.31□□□□□ -1.72
CHA4YLR098C ADP1P25371 1049 aa4.3□□□□□ -1.72
CHA4YLR098C NMD3P38861 518 aaKnown RBP4.3□□□□□ -1.72
CHA4YLR098C THI12P42883 340 aa4.3□□□□□ -1.72
CHA4YLR098C THI5P43534 340 aa4.3□□□□□ -1.72
CHA4YLR098C RSM26P47141 266 aa4.3□□□□□ -1.72
CHA4YLR098C THI11P47183 340 aa4.3□□□□□ -1.72
CHA4YLR098C ECL1P48235 211 aa4.3□□□□□ -1.72
CHA4YLR098C NOP7P53261 605 aaKnown RBP4.3□□□□□ -1.72
CHA4YLR098C THI13Q07748 340 aa4.3□□□□□ -1.72
CHA4YLR098C PUS7Q08647 676 aaKnown RBP4.3□□□□□ -1.72
CHA4YLR098C YOR093CQ12275 1648 aa4.3□□□□□ -1.72
CHA4YLR098C KAR2P16474 682 aaKnown RBP4.29□□□□□ -1.72
CHA4YLR098C PRO1P32264 428 aa4.29□□□□□ -1.72
CHA4YLR098C TPP1Q03796 238 aa4.29□□□□□ -1.72
CHA4YLR098C PDR12Q02785 1511 aa4.29□□□□□ -1.72
CHA4YLR098C IQG1Q12280 1495 aa4.29□□□□□ -1.72
CHA4YLR098C MLP1Q02455 1875 aaKnown RBP4.29□□□□□ -1.72
CHA4YLR098C SQT1P35184 431 aa4.29□□□□□ -1.72
CHA4YLR098C PEX28P38848 579 aa4.29□□□□□ -1.72
CHA4YLR098C XKS1P42826 600 aa4.29□□□□□ -1.72
CHA4YLR098C YLR257WQ06146 321 aaKnown RBP4.29□□□□□ -1.72
CHA4YLR098C TY3B-IQ7LHG5 1498 aaKnown RBP4.28□□□□□ -1.72
CHA4YLR098C SPO14P36126 1683 aa4.28□□□□□ -1.72
CHA4YLR098C RET1P22276 1149 aaKnown RBP4.28□□□□□ -1.72
CHA4YLR098C PTC7P38797 343 aa4.28□□□□□ -1.72
CHA4YLR098C YNR063WP53749 607 aa4.28□□□□□ -1.72
CHA4YLR098C LPX1Q12405 387 aaKnown RBP4.28□□□□□ -1.72
CHA4YLR098C GTS1P40956 396 aa4.27□□□□□ -1.73
CHA4YLR098C OXR1Q08952 273 aa4.27□□□□□ -1.73
CHA4YLR098C CHC1P22137 1653 aaKnown RBP4.27□□□□□ -1.73
CHA4YLR098C GAS1P22146 559 aaKnown RBP4.27□□□□□ -1.73
CHA4YLR098C IPL1P38991 367 aa4.27□□□□□ -1.73
CHA4YLR098C FAA3P39002 694 aa4.27□□□□□ -1.73
CHA4YLR098C UBP5P39944 805 aa4.27□□□□□ -1.73
CHA4YLR098C YPL109CQ02981 657 aa4.27□□□□□ -1.73
CHA4YLR098C RSA3Q05942 220 aaKnown RBP4.27□□□□□ -1.73
CHA4YLR098C SEC7P11075 2009 aaKnown RBP4.26□□□□□ -1.73
CHA4YLR098C BUD3P25558 1636 aa4.26□□□□□ -1.73
CHA4YLR098C MMS1Q06211 1407 aa4.26□□□□□ -1.73
CHA4YLR098C VMA4P22203 233 aaKnown RBP4.26□□□□□ -1.73
CHA4YLR098C CAB3P36076 571 aa4.26□□□□□ -1.73
CHA4YLR098C CFT1Q06632 1357 aaKnown RBP4.26□□□□□ -1.73
CHA4YLR098C HEM13P11353 328 aaKnown RBP4.25□□□□□ -1.73
CHA4YLR098C NIT1P40447 199 aa4.25□□□□□ -1.73
CHA4YLR098C YGL140CP53120 1219 aa4.25□□□□□ -1.73
CHA4YLR098C ORC3P54790 616 aa4.25□□□□□ -1.73
CHA4YLR098C ADI1Q03677 179 aa4.25□□□□□ -1.73
CHA4YLR098C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
CHA4YLR098C RPT1P33299 467 aaKnown RBP4.25□□□□□ -1.73
CHA4YLR098C RDH54P38086 958 aa4.25□□□□□ -1.73
CHA4YLR098C ATG14P38270 344 aa4.25□□□□□ -1.73
CHA4YLR098C HSE1P38753 452 aa4.25□□□□□ -1.73
CHA4YLR098C LAP2Q10740 671 aa4.25□□□□□ -1.73
CHA4YLR098C YRF1-1P0CX20 1796 aa4.24□□□□□ -1.73
CHA4YLR098C YRF1-5P0CX21 1796 aa4.24□□□□□ -1.73
CHA4YLR098C YRF1-8P0CX22 1796 aa4.24□□□□□ -1.73
CHA4YLR098C HXK1P04806 485 aaKnown RBP4.24□□□□□ -1.73
CHA4YLR098C SEC20P28791 383 aa4.24□□□□□ -1.73
CHA4YLR098C CDA2Q06703 312 aa4.24□□□□□ -1.73
CHA4YLR098C DOP1Q03921 1698 aa4.24□□□□□ -1.73
CHA4YLR098C SAM35P14693 329 aa4.23□□□□□ -1.73
CHA4YLR098C TSA1P34760 196 aaKnown RBP4.23□□□□□ -1.73
CHA4YLR098C EBP2P36049 427 aaKnown RBP4.23□□□□□ -1.73
CHA4YLR098C PAF1P38351 445 aa4.23□□□□□ -1.73
CHA4YLR098C YHL012WP38709 493 aa4.23□□□□□ -1.73
CHA4YLR098C PIC2P40035 300 aa4.23□□□□□ -1.73
CHA4YLR098C PRP43P53131 767 aaKnown RBP4.23□□□□□ -1.73
CHA4YLR098C BUD21Q08492 214 aaPredicted RBP4.23□□□□□ -1.73
CHA4YLR098C ADD66P36040 267 aa4.23□□□□□ -1.73
CHA4YLR098C QNS1P38795 714 aaKnown RBP4.23□□□□□ -1.73
CHA4YLR098C YJL045WP47052 634 aa4.23□□□□□ -1.73
CHA4YLR098C SEN54Q02825 467 aaPredicted RBP4.23□□□□□ -1.73
CHA4YLR098C HRK1Q08732 759 aaKnown RBP4.23□□□□□ -1.73
CHA4YLR098C LTE1P07866 1435 aa4.22□□□□□ -1.73
CHA4YLR098C YSP2Q06681 1438 aa4.22□□□□□ -1.73
CHA4YLR098C PDS5Q04264 1277 aa4.22□□□□□ -1.73
CHA4YLR098C SEC23P15303 768 aaKnown RBP4.21□□□□□ -1.74
CHA4YLR098C IME2P32581 645 aa4.21□□□□□ -1.74
CHA4YLR098C RKM2Q03942 479 aa4.21□□□□□ -1.74
CHA4YLR098C EST2Q06163 884 aa4.21□□□□□ -1.74
CHA4YLR098C YDL177CQ12257 170 aa4.21□□□□□ -1.74
CHA4YLR098C DNF2Q12675 1612 aa4.21□□□□□ -1.74
CHA4YLR098C AFG2P32794 780 aa4.21□□□□□ -1.74
CHA4YLR098C MDL2P33311 773 aa4.21□□□□□ -1.74
CHA4YLR098C ORC1P54784 914 aaPredicted RBP4.21□□□□□ -1.74
CHA4YLR098C NUP157P40064 1391 aaKnown RBP4.2□□□□□ -1.74
CHA4YLR098C DED1P06634 604 aaKnown RBP4.2□□□□□ -1.74
CHA4YLR098C ETP1P38748 585 aaKnown RBP4.2□□□□□ -1.74
CHA4YLR098C RAV1P47104 1357 aa4.19□□□□□ -1.74
CHA4YLR098C RPP0P05317 312 aaKnown RBP4.19□□□□□ -1.74
CHA4YLR098C VPS53P47061 822 aa4.19□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 80.4 ms