RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W SIP5P40210 489 aaKnown RBP5.26□□□□□ -1.57
CTK1YKL139W ZDS1P50111 915 aaKnown RBP5.26□□□□□ -1.57
CTK1YKL139W YNR029CP53729 429 aaKnown RBP5.26□□□□□ -1.57
CTK1YKL139W SPO71Q03868 1245 aa5.26□□□□□ -1.57
CTK1YKL139W SYT1Q06836 1226 aa5.26□□□□□ -1.57
CTK1YKL139W HBN1Q96VH4 193 aa5.26□□□□□ -1.57
CTK1YKL139W SFP1P32432 683 aa5.25□□□□□ -1.57
CTK1YKL139W RGD1P38339 666 aa5.25□□□□□ -1.57
CTK1YKL139W CEM1P39525 442 aa5.25□□□□□ -1.57
CTK1YKL139W GDH3P39708 457 aa5.25□□□□□ -1.57
CTK1YKL139W GCV1P48015 400 aa5.25□□□□□ -1.57
CTK1YKL139W UGO1Q03327 502 aa5.25□□□□□ -1.57
CTK1YKL139W PTC5Q12511 572 aa5.25□□□□□ -1.57
CTK1YKL139W TOP1P04786 769 aa5.25□□□□□ -1.57
CTK1YKL139W TOP3P13099 656 aa5.25□□□□□ -1.57
CTK1YKL139W MAL11P53048 616 aa5.25□□□□□ -1.57
CTK1YKL139W TFB2Q02939 513 aa5.25□□□□□ -1.57
CTK1YKL139W ALG6Q12001 544 aaKnown RBP5.25□□□□□ -1.57
CTK1YKL139W TOM70P07213 617 aaKnown RBP5.24□□□□□ -1.57
CTK1YKL139W PEX6P33760 1030 aa5.24□□□□□ -1.57
CTK1YKL139W YBR284WP38150 797 aa5.24□□□□□ -1.57
CTK1YKL139W YAR028WP39548 234 aa5.24□□□□□ -1.57
CTK1YKL139W POL5P39985 1022 aaKnown RBP5.24□□□□□ -1.57
CTK1YKL139W TED1P40533 473 aa5.24□□□□□ -1.57
CTK1YKL139W YDR306CQ06640 478 aa5.24□□□□□ -1.57
CTK1YKL139W GIC2Q06648 383 aa5.24□□□□□ -1.57
CTK1YKL139W GNT1Q12096 491 aa5.24□□□□□ -1.57
CTK1YKL139W CDC11P32458 415 aa5.23□□□□□ -1.57
CTK1YKL139W GEM1P39722 662 aa5.23□□□□□ -1.57
CTK1YKL139W YMR074CQ04773 145 aa5.23□□□□□ -1.57
CTK1YKL139W ATG13Q06628 738 aa5.23□□□□□ -1.57
CTK1YKL139W LAP2Q10740 671 aa5.23□□□□□ -1.57
CTK1YKL139W NAR1P23503 491 aaKnown RBP5.22□□□□□ -1.57
CTK1YKL139W AAR2P32357 355 aaPredicted RBP5.22□□□□□ -1.57
CTK1YKL139W GIS4Q04233 774 aa5.22□□□□□ -1.57
CTK1YKL139W SPP382Q06411 708 aaPredicted RBP5.22□□□□□ -1.57
CTK1YKL139W AVO1Q08236 1176 aa5.22□□□□□ -1.57
CTK1YKL139W PDC5P16467 563 aaKnown RBP5.21□□□□□ -1.57
CTK1YKL139W ERS1P17261 260 aa5.21□□□□□ -1.57
CTK1YKL139W NFS1P25374 497 aa5.21□□□□□ -1.57
CTK1YKL139W NUG1P40010 520 aaKnown RBP5.21□□□□□ -1.57
CTK1YKL139W YIR007WP40566 764 aa5.21□□□□□ -1.57
CTK1YKL139W GUS1P46655 708 aaKnown RBP RIP-Chip data5.21□□□□□ -1.57not detected
CTK1YKL139W VPS53P47061 822 aa5.21□□□□□ -1.57
CTK1YKL139W HLJ1P48353 224 aa5.21□□□□□ -1.57
CTK1YKL139W YGR045CP53229 120 aa5.21□□□□□ -1.57
CTK1YKL139W TPO2P53283 614 aa5.21□□□□□ -1.57
CTK1YKL139W ELG1Q12050 791 aa5.21□□□□□ -1.57
CTK1YKL139W YER152CP10356 443 aa5.21□□□□□ -1.58
CTK1YKL139W MSD1P15179 658 aaKnown RBP5.21□□□□□ -1.58
CTK1YKL139W MEF1P25039 761 aa5.21□□□□□ -1.58
CTK1YKL139W DUS3Q06053 668 aaKnown RBP5.21□□□□□ -1.58
CTK1YKL139W SLP1Q12232 587 aa5.21□□□□□ -1.58
CTK1YKL139W YLL054CQ12244 843 aa5.21□□□□□ -1.58
CTK1YKL139W YPR071WQ12346 211 aa5.21□□□□□ -1.58
CTK1YKL139W SAC7P17121 654 aa5.2□□□□□ -1.58
CTK1YKL139W PPH3P32345 308 aa5.2□□□□□ -1.58
CTK1YKL139W KNS1P32350 737 aaPredicted RBP5.2□□□□□ -1.58
CTK1YKL139W DOM34P33309 386 aa5.2□□□□□ -1.58
CTK1YKL139W HSE1P38753 452 aa5.2□□□□□ -1.58
CTK1YKL139W QNS1P38795 714 aaKnown RBP5.2□□□□□ -1.58
CTK1YKL139W PNT1P38969 423 aa5.2□□□□□ -1.58
CTK1YKL139W DSS1P39112 969 aa5.2□□□□□ -1.58
CTK1YKL139W UBP6P43593 499 aaKnown RBP5.2□□□□□ -1.58
CTK1YKL139W ELA1P53861 379 aaPredicted RBP5.2□□□□□ -1.58
CTK1YKL139W YNL193WP53870 558 aa5.2□□□□□ -1.58
CTK1YKL139W YOL057WQ08225 711 aa5.2□□□□□ -1.58
CTK1YKL139W MDM12Q92328 271 aa5.2□□□□□ -1.58
CTK1YKL139W GPM1P00950 247 aaKnown RBP5.19□□□□□ -1.58
CTK1YKL139W DBP2P24783 546 aaKnown RBP5.19□□□□□ -1.58
CTK1YKL139W PET10P36139 283 aa5.19□□□□□ -1.58
CTK1YKL139W PGM2P37012 569 aaKnown RBP5.19□□□□□ -1.58
CTK1YKL139W ALG14P38242 237 aa5.19□□□□□ -1.58
CTK1YKL139W FOL1P53848 824 aa5.19□□□□□ -1.58
CTK1YKL139W RSA3Q05942 220 aaKnown RBP5.19□□□□□ -1.58
CTK1YKL139W YPL260WQ08977 551 aa5.19□□□□□ -1.58
CTK1YKL139W SPO21Q12411 609 aa5.19□□□□□ -1.58
CTK1YKL139W TY4B-PA0A0B7P3V8 1104 aa5.18□□□□□ -1.58
CTK1YKL139W RPL11AP0C0W9 174 aaKnown RBP5.18□□□□□ -1.58
CTK1YKL139W KIP1P28742 1111 aa5.18□□□□□ -1.58
CTK1YKL139W MAE1P36013 669 aaKnown RBP5.18□□□□□ -1.58
CTK1YKL139W ACO2P39533 789 aa5.18□□□□□ -1.58
CTK1YKL139W YGR237CP50089 785 aa5.18□□□□□ -1.58
CTK1YKL139W RPL11BQ3E757 174 aaPredicted RBP5.18□□□□□ -1.58
CTK1YKL139W TY4A-HQ6Q5P6 413 aa5.18□□□□□ -1.58
CTK1YKL139W RAD53P22216 821 aa5.17□□□□□ -1.58
CTK1YKL139W RET1P22276 1149 aaKnown RBP5.17□□□□□ -1.58
CTK1YKL139W GRX7P38068 203 aa5.17□□□□□ -1.58
CTK1YKL139W GPB2P39717 880 aa5.17□□□□□ -1.58
CTK1YKL139W SIT1P39980 628 aa5.17□□□□□ -1.58
CTK1YKL139W MXR1P40029 184 aa5.17□□□□□ -1.58
CTK1YKL139W MRC1P25588 1096 aa5.16□□□□□ -1.58
CTK1YKL139W VBA3P25594 458 aa5.16□□□□□ -1.58
CTK1YKL139W SCT1P32784 759 aa5.16□□□□□ -1.58
CTK1YKL139W YRO2P38079 344 aa5.16□□□□□ -1.58
CTK1YKL139W PAF1P38351 445 aa5.16□□□□□ -1.58
CTK1YKL139W ALG2P43636 503 aa5.16□□□□□ -1.58
CTK1YKL139W PMT3P47190 753 aa5.16□□□□□ -1.58
CTK1YKL139W KIP3P53086 805 aaKnown RBP5.16□□□□□ -1.58
CTK1YKL139W CAF120P53836 1060 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms