RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W RPN11P43588 306 aaKnown RBP3.36□□□□□ -1.87
PHD1YKL043W TRS85P46944 698 aa3.36□□□□□ -1.87
PHD1YKL043W YGL242CP53066 181 aa3.36□□□□□ -1.87
PHD1YKL043W HXT17P53631 564 aa3.36□□□□□ -1.87
PHD1YKL043W VPS75P53853 264 aa3.36□□□□□ -1.87
PHD1YKL043W FAR11P53917 953 aa3.36□□□□□ -1.87
PHD1YKL043W ADE12P80210 433 aaKnown RBP3.36□□□□□ -1.87
PHD1YKL043W FOX2Q02207 900 aaKnown RBP3.36□□□□□ -1.87
PHD1YKL043W PKH3Q03306 898 aaPredicted RBP3.36□□□□□ -1.87
PHD1YKL043W ARO80Q04052 950 aa3.36□□□□□ -1.87
PHD1YKL043W YDR338CQ05497 695 aa3.36□□□□□ -1.87
PHD1YKL043W NUR1Q12066 484 aa3.36□□□□□ -1.87
PHD1YKL043W MCM16Q12262 181 aa3.36□□□□□ -1.87
PHD1YKL043W HIF1Q12373 385 aa3.36□□□□□ -1.87
PHD1YKL043W SRF1Q12516 437 aa3.36□□□□□ -1.87
PHD1YKL043W YIL177CP40434 1758 aa3.35□□□□□ -1.87
PHD1YKL043W YJL225CP40889 1758 aa3.35□□□□□ -1.87
PHD1YKL043W RPB2P08518 1224 aaKnown RBP3.35□□□□□ -1.87
PHD1YKL043W SEC23P15303 768 aaKnown RBP3.35□□□□□ -1.87
PHD1YKL043W PHO13P19881 312 aa3.35□□□□□ -1.87
PHD1YKL043W CLB4P24871 460 aa3.35□□□□□ -1.87
PHD1YKL043W VAC17P25591 423 aa3.35□□□□□ -1.87
PHD1YKL043W BRF1P29056 596 aa3.35□□□□□ -1.87
PHD1YKL043W PDB1P32473 366 aaKnown RBP3.35□□□□□ -1.87
PHD1YKL043W NIP1P32497 812 aaKnown RBP3.35□□□□□ -1.87
PHD1YKL043W MRP8P35719 219 aa3.35□□□□□ -1.87
PHD1YKL043W HEL1P36113 551 aa3.35□□□□□ -1.87
PHD1YKL043W REI1P38344 393 aaPredicted RBP3.35□□□□□ -1.87
PHD1YKL043W RSC30P38781 883 aa3.35□□□□□ -1.87
PHD1YKL043W CCC2P38995 1004 aa3.35□□□□□ -1.87
PHD1YKL043W BEM4P39011 633 aa3.35□□□□□ -1.87
PHD1YKL043W AIM9P40053 627 aaKnown RBP3.35□□□□□ -1.87
PHD1YKL043W VID28P40547 921 aa3.35□□□□□ -1.87
PHD1YKL043W YIL001WP40560 513 aa3.35□□□□□ -1.87
PHD1YKL043W YIR007WP40566 764 aa3.35□□□□□ -1.87
PHD1YKL043W MDJ2P42834 146 aa3.35□□□□□ -1.87
PHD1YKL043W YJL181WP46987 611 aa3.35□□□□□ -1.87
PHD1YKL043W VPS53P47061 822 aa3.35□□□□□ -1.87
PHD1YKL043W YJR079WP47126 109 aa3.35□□□□□ -1.87
PHD1YKL043W CCM1P48237 864 aaPredicted RBP3.35□□□□□ -1.87
PHD1YKL043W APT1P49435 187 aaKnown RBP3.35□□□□□ -1.87
PHD1YKL043W SHE4P51534 789 aa3.35□□□□□ -1.87
PHD1YKL043W IST1P53843 298 aaPredicted RBP3.35□□□□□ -1.87
PHD1YKL043W SUB1P54000 292 aaKnown RBP3.35□□□□□ -1.87
PHD1YKL043W ADE16P54113 591 aaKnown RBP3.35□□□□□ -1.87
PHD1YKL043W SSL2Q00578 843 aa3.35□□□□□ -1.87
PHD1YKL043W POB3Q04636 552 aaKnown RBP3.35□□□□□ -1.87
PHD1YKL043W FAR8Q05040 523 aa3.35□□□□□ -1.87
PHD1YKL043W SGD1Q06132 899 aa3.35□□□□□ -1.87
PHD1YKL043W ATG23Q06671 453 aa3.35□□□□□ -1.87
PHD1YKL043W ELG1Q12050 791 aa3.35□□□□□ -1.87
PHD1YKL043W SLP1Q12232 587 aa3.35□□□□□ -1.87
PHD1YKL043W OSH2Q12451 1283 aa3.35□□□□□ -1.87
PHD1YKL043W NKP1Q12493 238 aa3.35□□□□□ -1.87
PHD1YKL043W TRS33Q99394 268 aa3.35□□□□□ -1.87
PHD1YKL043W FKS3Q04952 1785 aa3.34□□□□□ -1.87
PHD1YKL043W GCD2P12754 651 aaPredicted RBP3.34□□□□□ -1.87
PHD1YKL043W TUP1P16649 713 aa3.34□□□□□ -1.87
PHD1YKL043W PRE10P21242 288 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
PHD1YKL043W ADE2P21264 571 aaKnown RBP3.34□□□□□ -1.87
PHD1YKL043W KCC4P25389 1037 aa3.34□□□□□ -1.87
PHD1YKL043W GSY2P27472 705 aa3.34□□□□□ -1.87
PHD1YKL043W LOS1P33418 1100 aaPredicted RBP3.34□□□□□ -1.87
PHD1YKL043W TIF3P34167 436 aaKnown RBP3.34□□□□□ -1.87
PHD1YKL043W SQT1P35184 431 aa3.34□□□□□ -1.87
PHD1YKL043W YKT6P36015 200 aaKnown RBP3.34□□□□□ -1.87
PHD1YKL043W YKR018CP36114 725 aa3.34□□□□□ -1.87
PHD1YKL043W ISW1P38144 1129 aa3.34□□□□□ -1.87
PHD1YKL043W YHL017WP38745 532 aa3.34□□□□□ -1.87
PHD1YKL043W MRX1P40050 688 aa3.34□□□□□ -1.87
PHD1YKL043W SAP185P40856 1058 aa3.34□□□□□ -1.87
PHD1YKL043W POL31P46957 487 aa3.34□□□□□ -1.87
PHD1YKL043W INP52P50942 1183 aa3.34□□□□□ -1.87
PHD1YKL043W YGL081WP53156 320 aa3.34□□□□□ -1.87
PHD1YKL043W BTN2P53286 410 aa3.34□□□□□ -1.87
PHD1YKL043W SPO1P53541 631 aa3.34□□□□□ -1.87
PHD1YKL043W YNR021WP53723 404 aaKnown RBP3.34□□□□□ -1.87
PHD1YKL043W DSL1P53847 754 aa3.34□□□□□ -1.87
PHD1YKL043W MEC3Q02574 474 aa3.34□□□□□ -1.87
PHD1YKL043W WAR1Q03631 944 aa3.34□□□□□ -1.87
PHD1YKL043W SPC24Q04477 213 aa3.34□□□□□ -1.87
PHD1YKL043W VPS38Q05919 439 aa3.34□□□□□ -1.87
PHD1YKL043W MRD1Q06106 887 aaKnown RBP3.34□□□□□ -1.87
PHD1YKL043W AOS1Q06624 347 aa3.34□□□□□ -1.87
PHD1YKL043W SLK19Q08581 821 aaKnown RBP3.34□□□□□ -1.87
PHD1YKL043W GPN2Q08726 347 aaPredicted RBP3.34□□□□□ -1.87
PHD1YKL043W YOR223WQ12015 292 aa3.34□□□□□ -1.87
PHD1YKL043W CHS5Q12114 671 aaKnown RBP3.34□□□□□ -1.87
PHD1YKL043W NHA1Q99271 985 aa3.34□□□□□ -1.87
PHD1YKL043W ADE3P07245 946 aaKnown RBP3.33□□□□□ -1.88
PHD1YKL043W GPA1P08539 472 aa3.33□□□□□ -1.88
PHD1YKL043W PGI1P12709 554 aaKnown RBP3.33□□□□□ -1.88
PHD1YKL043W TYR1P20049 452 aa3.33□□□□□ -1.88
PHD1YKL043W RPN2P32565 945 aaKnown RBP3.33□□□□□ -1.88
PHD1YKL043W PRP40P33203 583 aaKnown RBP3.33□□□□□ -1.88
PHD1YKL043W YKL091CP33324 310 aaKnown RBP3.33□□□□□ -1.88
PHD1YKL043W YKR075CP36155 307 aa3.33□□□□□ -1.88
PHD1YKL043W MCX1P38323 520 aaPredicted RBP3.33□□□□□ -1.88
PHD1YKL043W EFM2P38347 419 aa3.33□□□□□ -1.88
PHD1YKL043W TDA3P38758 523 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms