RNA–Protein interactions for RNA: YJR036C

HUL4, Transcript of Protein with similarity to hect domain E3 ubiquitin-protein ligases, yeast

Gene HUL4, Length 2,679 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HUL4	YJR036C	AIM20	P40451	204 aa		5.08	□□□□□ -1.6
HUL4	YJR036C	NIT2	P47016	307 aa		5.08	□□□□□ -1.6
HUL4	YJR036C	GNP1	P48813	663 aa		5.08	□□□□□ -1.6
HUL4	YJR036C	TUB4	P53378	473 aa		5.08	□□□□□ -1.6
HUL4	YJR036C	RAT1	Q02792	1006 aa	Known RBP	5.08	□□□□□ -1.6
HUL4	YJR036C	BMS1	Q08965	1183 aa	Known RBP	5.08	□□□□□ -1.6
HUL4	YJR036C	FAP7	Q12055	197 aa	Predicted RBP	5.08	□□□□□ -1.6
HUL4	YJR036C	NUP145	P49687	1317 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	TRM1	P15565	570 aa	Known RBP	5.07	□□□□□ -1.6
HUL4	YJR036C	HSP60	P19882	572 aa	Known RBP	5.07	□□□□□ -1.6
HUL4	YJR036C	MRPL32	P25348	183 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	RPC53	P25441	422 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	SEA4	P38164	1038 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	SUM1	P46676	1062 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	RSC4	Q02206	625 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	DBP9	Q06218	594 aa	Known RBP	5.07	□□□□□ -1.6
HUL4	YJR036C	SPP382	Q06411	708 aa	Predicted RBP	5.07	□□□□□ -1.6
HUL4	YJR036C	LAP2	Q10740	671 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	REX3	Q12090	404 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	GCR1	P07261	785 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	PDI1	P17967	522 aa	Known RBP	5.07	□□□□□ -1.6
HUL4	YJR036C	HNM1	P19807	563 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	MIH1	P23748	554 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	TYS1	P36421	394 aa	Known RBP	5.07	□□□□□ -1.6
HUL4	YJR036C	BAP2	P38084	609 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	HAL5	P38970	855 aa	Known RBP	5.07	□□□□□ -1.6
HUL4	YJR036C	FUN12	P39730	1002 aa	Known RBP	5.07	□□□□□ -1.6
HUL4	YJR036C	ARB1	P40024	610 aa	Known RBP	5.07	□□□□□ -1.6
HUL4	YJR036C	HIS6	P40545	261 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
HUL4	YJR036C	HSV2	P50079	448 aa	Predicted RBP	5.07	□□□□□ -1.6
HUL4	YJR036C	YKU80	Q04437	629 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	YPR097W	Q06839	1073 aa		5.07	□□□□□ -1.6
HUL4	YJR036C	RUD3	Q12234	484 aa	Known RBP	5.07	□□□□□ -1.6
HUL4	YJR036C	CDC60	P26637	1090 aa	Known RBP	5.06	□□□□□ -1.6
HUL4	YJR036C	LYP1	P32487	611 aa		5.06	□□□□□ -1.6
HUL4	YJR036C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
HUL4	YJR036C	RIA1	P53893	1110 aa		5.06	□□□□□ -1.6
HUL4	YJR036C	UFD2	P54860	961 aa		5.06	□□□□□ -1.6
HUL4	YJR036C	CUE5	Q08412	411 aa	Known RBP	5.06	□□□□□ -1.6
HUL4	YJR036C	TRE2	Q08693	809 aa		5.06	□□□□□ -1.6
HUL4	YJR036C	SAC3	P46674	1301 aa		5.06	□□□□□ -1.6
HUL4	YJR036C	SLY41	P22215	453 aa		5.06	□□□□□ -1.6
HUL4	YJR036C	YBR238C	P38330	731 aa	Known RBP	5.06	□□□□□ -1.6
HUL4	YJR036C	FMP10	P40098	244 aa		5.06	□□□□□ -1.6
HUL4	YJR036C	RMD8	P43620	662 aa		5.06	□□□□□ -1.6
HUL4	YJR036C	SHE10	P53075	577 aa		5.06	□□□□□ -1.6
HUL4	YJR036C	UTP8	P53276	713 aa	Known RBP	5.06	□□□□□ -1.6
HUL4	YJR036C	NCS2	P53923	493 aa	Predicted RBP	5.06	□□□□□ -1.6
HUL4	YJR036C	REX2	P54964	269 aa	Known RBP	5.06	□□□□□ -1.6
HUL4	YJR036C	CAB1	Q04430	367 aa		5.06	□□□□□ -1.6
HUL4	YJR036C	ADY3	Q07732	790 aa		5.06	□□□□□ -1.6
HUL4	YJR036C	CMR1	Q12510	522 aa	Known RBP	5.06	□□□□□ -1.6
HUL4	YJR036C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
HUL4	YJR036C	UGA4	P32837	571 aa		5.05	□□□□□ -1.6
HUL4	YJR036C	EAP1	P36041	632 aa	Known RBP	5.05	□□□□□ -1.6
HUL4	YJR036C	MUD2	P36084	527 aa	Known RBP	5.05	□□□□□ -1.6
HUL4	YJR036C	CIT3	P43635	486 aa		5.05	□□□□□ -1.6
HUL4	YJR036C	SHE9	Q04172	456 aa		5.05	□□□□□ -1.6
HUL4	YJR036C	SPO75	Q07798	868 aa		5.05	□□□□□ -1.6
HUL4	YJR036C	TRP2	P00899	507 aa	Known RBP	5.05	□□□□□ -1.6
HUL4	YJR036C	GFA1	P14742	717 aa	Known RBP	5.05	□□□□□ -1.6
HUL4	YJR036C	VAN1	P23642	535 aa		5.05	□□□□□ -1.6
HUL4	YJR036C	PPQ1	P32945	549 aa		5.05	□□□□□ -1.6
HUL4	YJR036C	YHL008C	P38750	627 aa		5.05	□□□□□ -1.6
HUL4	YJR036C	ILV3	P39522	585 aa	Known RBP	5.05	□□□□□ -1.6
HUL4	YJR036C	AXL1	P40851	1208 aa		5.05	□□□□□ -1.6
HUL4	YJR036C	YJR115W	P47152	169 aa		5.05	□□□□□ -1.6
HUL4	YJR036C	GTR1	Q00582	310 aa		5.05	□□□□□ -1.6
HUL4	YJR036C	PRP42	Q03776	544 aa	Known RBP	5.05	□□□□□ -1.6
HUL4	YJR036C	YDR131C	Q03899	556 aa		5.05	□□□□□ -1.6
HUL4	YJR036C	SBP1	P10080	294 aa	Known RBP	5.04	□□□□□ -1.6
HUL4	YJR036C	AAC3	P18238	307 aa		5.04	□□□□□ -1.6
HUL4	YJR036C	CNS1	P33313	385 aa		5.04	□□□□□ -1.6
HUL4	YJR036C	SPC29	P33419	253 aa		5.04	□□□□□ -1.6
HUL4	YJR036C	SOH1	P38633	127 aa		5.04	□□□□□ -1.6
HUL4	YJR036C	NOP16	P40007	231 aa	Known RBP	5.04	□□□□□ -1.6
HUL4	YJR036C	TOK1	P40310	691 aa		5.04	□□□□□ -1.6
HUL4	YJR036C	RAD26	P40352	1085 aa		5.04	□□□□□ -1.6
HUL4	YJR036C	JEM1	P40358	645 aa		5.04	□□□□□ -1.6
HUL4	YJR036C	SKP2	P42843	763 aa		5.04	□□□□□ -1.6
HUL4	YJR036C	QRI7	P43122	407 aa		5.04	□□□□□ -1.6
HUL4	YJR036C	DUG1	P43616	481 aa	Known RBP	5.04	□□□□□ -1.6
HUL4	YJR036C	FAL1	Q12099	399 aa	Known RBP	5.04	□□□□□ -1.6
HUL4	YJR036C	NGR1	P32831	672 aa	Known RBP	5.04	□□□□□ -1.6
HUL4	YJR036C	RIB7	P33312	244 aa		5.04	□□□□□ -1.6
HUL4	YJR036C	SBE2	P42223	864 aa	Known RBP	5.04	□□□□□ -1.6
HUL4	YJR036C	EMW1	P42842	904 aa	Known RBP	5.04	□□□□□ -1.6
HUL4	YJR036C	SET2	P46995	733 aa	Known RBP	5.04	□□□□□ -1.6
HUL4	YJR036C	YPL109C	Q02981	657 aa		5.04	□□□□□ -1.6
HUL4	YJR036C	UTP21	Q06078	939 aa	Predicted RBP	5.04	□□□□□ -1.6
HUL4	YJR036C	CLP1	Q08685	445 aa	Predicted RBP	5.04	□□□□□ -1.6
HUL4	YJR036C	SMF3	Q12078	473 aa	Predicted RBP	5.04	□□□□□ -1.6
HUL4	YJR036C	VMA2	P16140	517 aa	Known RBP	5.03	□□□□□ -1.6
HUL4	YJR036C	AGP1	P25376	633 aa		5.03	□□□□□ -1.6
HUL4	YJR036C	RPL5	P26321	297 aa	Known RBP	5.03	□□□□□ -1.6
HUL4	YJR036C	DLD1	P32891	587 aa		5.03	□□□□□ -1.6
HUL4	YJR036C	RIM4	P38741	713 aa		5.03	□□□□□ -1.6
HUL4	YJR036C	NAS2	P40555	220 aa		5.03	□□□□□ -1.6
HUL4	YJR036C	IMA5	P40884	581 aa		5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 125.7 ms