RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C STE23Q06010 1027 aa5.04□□□□□ -1.6
PAN1YIR006C DIP2Q12220 943 aaPredicted RBP5.04□□□□□ -1.6
PAN1YIR006C BRR1Q99177 341 aaPredicted RBP5.04□□□□□ -1.6
PAN1YIR006C MAK16P10962 306 aaPredicted RBP5.03□□□□□ -1.6
PAN1YIR006C GFA1P14742 717 aaKnown RBP5.03□□□□□ -1.6
PAN1YIR006C SWI4P25302 1093 aaKnown RBP5.03□□□□□ -1.6
PAN1YIR006C RAD5P32849 1169 aaPredicted RBP5.03□□□□□ -1.6
PAN1YIR006C MED8P38304 223 aa5.03□□□□□ -1.6
PAN1YIR006C KAP123P40069 1113 aaKnown RBP5.03□□□□□ -1.6
PAN1YIR006C YML082WQ04533 649 aaKnown RBP5.03□□□□□ -1.6
PAN1YIR006C PDC6P26263 563 aaKnown RBP5.03□□□□□ -1.6
PAN1YIR006C CCM1P48237 864 aaPredicted RBP5.03□□□□□ -1.6
PAN1YIR006C CBK1P53894 756 aa5.03□□□□□ -1.6
PAN1YIR006C APL4Q12028 832 aa5.03□□□□□ -1.6
PAN1YIR006C PRP4P20053 465 aaKnown RBP5.03□□□□□ -1.6
PAN1YIR006C SEC8P32855 1065 aa5.03□□□□□ -1.6
PAN1YIR006C GEF1P37020 779 aa5.03□□□□□ -1.6
PAN1YIR006C SUB1P54000 292 aaKnown RBP5.03□□□□□ -1.6
PAN1YIR006C OXR1Q08952 273 aa5.03□□□□□ -1.6
PAN1YIR006C ANP1P32629 500 aa5.03□□□□□ -1.61
PAN1YIR006C MCX1P38323 520 aaPredicted RBP5.03□□□□□ -1.61
PAN1YIR006C NOG1Q02892 647 aaKnown RBP5.03□□□□□ -1.61
PAN1YIR006C TFC6Q06339 672 aa5.03□□□□□ -1.61
PAN1YIR006C YOL087CQ99247 1116 aa5.03□□□□□ -1.61
PAN1YIR006C YMR085WP0CF18 432 aa5.02□□□□□ -1.61
PAN1YIR006C GCD2P12754 651 aaPredicted RBP5.02□□□□□ -1.61
PAN1YIR006C DAL1P32375 460 aa5.02□□□□□ -1.61
PAN1YIR006C VTC2P43585 828 aa5.02□□□□□ -1.61
PAN1YIR006C RNR4P49723 345 aaKnown RBP5.02□□□□□ -1.61
PAN1YIR006C INP52P50942 1183 aa5.02□□□□□ -1.61
PAN1YIR006C APP1P53933 587 aa5.02□□□□□ -1.61
PAN1YIR006C SOV1Q04748 898 aa5.02□□□□□ -1.61
PAN1YIR006C ADY3Q07732 790 aa5.02□□□□□ -1.61
PAN1YIR006C YOR111WQ99210 232 aa5.02□□□□□ -1.61
PAN1YIR006C AI2P03876 854 aa5.02□□□□□ -1.61
PAN1YIR006C ARG82P07250 355 aa5.02□□□□□ -1.61
PAN1YIR006C SRP54P20424 541 aaKnown RBP5.02□□□□□ -1.61
PAN1YIR006C CLB3P24870 427 aa5.02□□□□□ -1.61
PAN1YIR006C RRN6P32786 894 aa5.02□□□□□ -1.61
PAN1YIR006C RXT2P38255 430 aa5.02□□□□□ -1.61
PAN1YIR006C EMP47P43555 445 aa5.02□□□□□ -1.61
PAN1YIR006C ASE1P50275 885 aa5.02□□□□□ -1.61
PAN1YIR006C EBS1Q03466 884 aaKnown RBP5.02□□□□□ -1.61
PAN1YIR006C YLR001CQ07895 862 aa5.02□□□□□ -1.61
PAN1YIR006C TMA16Q08687 178 aa5.02□□□□□ -1.61
PAN1YIR006C IES3Q12345 250 aa5.02□□□□□ -1.61
PAN1YIR006C PRE10P21242 288 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
PAN1YIR006C BUD14P27637 709 aa5.02□□□□□ -1.61
PAN1YIR006C REV7P38927 245 aa5.02□□□□□ -1.61
PAN1YIR006C DUR1,2P32528 1835 aaKnown RBP5.02□□□□□ -1.61
PAN1YIR006C TOM70P07213 617 aaKnown RBP5.01□□□□□ -1.61
PAN1YIR006C RPS6AP0CX37 236 aaKnown RBP5.01□□□□□ -1.61
PAN1YIR006C RPS6BP0CX38 236 aaPredicted RBP5.01□□□□□ -1.61
PAN1YIR006C REB1P21538 810 aa5.01□□□□□ -1.61
PAN1YIR006C NPL6P32832 435 aa5.01□□□□□ -1.61
PAN1YIR006C RRN3P36070 627 aa5.01□□□□□ -1.61
PAN1YIR006C PES4P39684 611 aa5.01□□□□□ -1.61
PAN1YIR006C ECM1P39715 212 aa5.01□□□□□ -1.61
PAN1YIR006C VMA10P48836 114 aaKnown RBP5.01□□□□□ -1.61
PAN1YIR006C ERP6P53198 216 aa5.01□□□□□ -1.61
PAN1YIR006C RPT4P53549 437 aaKnown RBP5.01□□□□□ -1.61
PAN1YIR006C BET4Q00618 327 aa5.01□□□□□ -1.61
PAN1YIR006C OSW2Q12202 724 aa5.01□□□□□ -1.61
PAN1YIR006C AUS1Q08409 1394 aa5.01□□□□□ -1.61
PAN1YIR006C STI1P15705 589 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
PAN1YIR006C PTH2P34222 208 aa5.01□□□□□ -1.61
PAN1YIR006C SHU2P38957 223 aa5.01□□□□□ -1.61
PAN1YIR006C PUS6P53294 404 aa5.01□□□□□ -1.61
PAN1YIR006C AAD16Q02895 342 aa5.01□□□□□ -1.61
PAN1YIR006C TSR2Q06672 205 aaKnown RBP5.01□□□□□ -1.61
PAN1YIR006C ADF1Q2V2Q1 113 aa5.01□□□□□ -1.61
PAN1YIR006C RPL22AP05749 121 aaKnown RBP5.01□□□□□ -1.61
PAN1YIR006C VPS34P22543 875 aa5.01□□□□□ -1.61
PAN1YIR006C MGM1P32266 881 aa5.01□□□□□ -1.61
PAN1YIR006C GYP6P32806 458 aa5.01□□□□□ -1.61
PAN1YIR006C MPE1P35728 441 aaKnown RBP5.01□□□□□ -1.61
PAN1YIR006C PIB2P53191 635 aa5.01□□□□□ -1.61
PAN1YIR006C YDR306CQ06640 478 aa5.01□□□□□ -1.61
PAN1YIR006C YAP7Q08182 245 aa5.01□□□□□ -1.61
PAN1YIR006C CKI1P20485 582 aa5□□□□□ -1.61
PAN1YIR006C AAD3P25612 363 aa5□□□□□ -1.61
PAN1YIR006C BLI1P35727 113 aa5□□□□□ -1.61
PAN1YIR006C NAB3P38996 802 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
PAN1YIR006C YTA12P40341 825 aa5□□□□□ -1.61
PAN1YIR006C SHQ1P40486 507 aaPredicted RBP5□□□□□ -1.61
PAN1YIR006C RCF1Q03713 159 aa5□□□□□ -1.61
PAN1YIR006C USO1P25386 1790 aa5□□□□□ -1.61
PAN1YIR006C SSB1P11484 613 aaKnown RBP5□□□□□ -1.61
PAN1YIR006C DBP5P20449 482 aaKnown RBP5□□□□□ -1.61
PAN1YIR006C BMH1P29311 267 aaKnown RBP5□□□□□ -1.61
PAN1YIR006C SRP40P32583 406 aaPredicted RBP5□□□□□ -1.61
PAN1YIR006C YBL028CP38202 106 aa5□□□□□ -1.61
PAN1YIR006C SSB2P40150 613 aaKnown RBP5□□□□□ -1.61
PAN1YIR006C IES1P43579 692 aa5□□□□□ -1.61
PAN1YIR006C COG6P53959 839 aa5□□□□□ -1.61
PAN1YIR006C URH1Q04179 340 aa5□□□□□ -1.61
PAN1YIR006C YPL150WQ12152 901 aa5□□□□□ -1.61
PAN1YIR006C TFC4P33339 1025 aa5□□□□□ -1.61
PAN1YIR006C YKL050CP35736 922 aa5□□□□□ -1.61
PAN1YIR006C UGA2P38067 497 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms