RNA–Protein interactions for RNA: YIL013C

PDR11, Transcript of ATP-binding cassette (ABC) transporter, yeast

Gene PDR11, Length 4,236 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR11	YIL013C	REG2	P38232	338 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	ETP1	P38748	585 aa	Known RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	ORC6	P38826	435 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	TIF4631	P39935	952 aa	Known RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	YEL025C	P39991	1188 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	FYV8	P46949	817 aa	Known RBP	2.68	□□□□□ -1.98
PDR11	YIL013C	YML020W	Q03722	664 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	VPS20	Q04272	221 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	DSE3	Q08729	430 aa		2.68	□□□□□ -1.98
PDR11	YIL013C	MATALPHA2	P0CY08	210 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	HMLALPHA2	P0CY09	210 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	SAM1	P10659	382 aa	Known RBP	2.67	□□□□□ -1.98
PDR11	YIL013C	MCR1	P36060	302 aa	Known RBP	2.67	□□□□□ -1.98
PDR11	YIL013C	YFL034W	P43564	1073 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	YJL171C	P46992	396 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	PHM6	Q05637	104 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	UBX5	Q06682	500 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	TRM11	Q12463	433 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	SPT2	P06843	333 aa	Predicted RBP	2.67	□□□□□ -1.98
PDR11	YIL013C	SRD1	P09007	221 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	CDC15	P27636	974 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	EAF5	P39995	279 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	UTP7	P40055	554 aa	Known RBP	2.67	□□□□□ -1.98
PDR11	YIL013C	MGA2	P40578	1113 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	TFG2	P41896	400 aa	Predicted RBP	2.67	□□□□□ -1.98
PDR11	YIL013C	PTK2	P47116	818 aa	Known RBP	2.67	□□□□□ -1.98
PDR11	YIL013C	PIB2	P53191	635 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	TPO2	P53283	614 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	HXT17	P53631	564 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	SEC5	P89102	971 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	SPH1	Q06160	661 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	SKG3	Q06315	1026 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	NOC3	Q07896	663 aa	Predicted RBP	2.67	□□□□□ -1.98
PDR11	YIL013C	PSR2	Q07949	397 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	TAF10	Q12030	206 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	UTP10	P42945	1769 aa	Known RBP	2.67	□□□□□ -1.98
PDR11	YIL013C	MET6	P05694	767 aa	Known RBP	2.67	□□□□□ -1.98
PDR11	YIL013C	SWI4	P25302	1093 aa	Known RBP	2.67	□□□□□ -1.98
PDR11	YIL013C	IRE1	P32361	1115 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	YNL134C	P53912	376 aa	Known RBP	2.67	□□□□□ -1.98
PDR11	YIL013C	TRS120	Q04183	1289 aa		2.67	□□□□□ -1.98
PDR11	YIL013C	CBP3	P21560	335 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	TKL1	P23254	680 aa	Known RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	TVP38	P36164	337 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	KTR3	P38130	404 aa	Predicted RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	JJJ3	P47138	172 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	SGM1	P47166	707 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	CEF1	Q03654	590 aa	Predicted RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	SKY1	Q03656	742 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	ISA1	Q07821	250 aa	Predicted RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	HIS4	P00815	799 aa	Known RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	TCP1	P12612	559 aa	Known RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	YDJ1	P25491	409 aa	Known RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	RAM2	P29703	316 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	CSM2	P40465	213 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	VTC2	P43585	828 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	SHE10	P53075	577 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	CBK1	P53894	756 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	NCS2	P53923	493 aa	Predicted RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	MSC2	Q03455	724 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	MYO5	Q04439	1219 aa	Known RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	DUS4	Q06063	367 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	GUD1	Q07729	489 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	GET3	Q12154	354 aa	Known RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	LAM4	P38800	1345 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	MAS2	P11914	482 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
PDR11	YIL013C	MYO3	P36006	1272 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	RRM3	P38766	723 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	SMC2	P38989	1170 aa	Known RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	NOC2	P39744	710 aa	Known RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	SNF7	P39929	240 aa	Known RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	ULP1	Q02724	621 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	PKH3	Q03306	898 aa	Predicted RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	CLN3	P13365	580 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	CKA2	P19454	339 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	VPS3	P23643	1011 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	FUB1	P25659	250 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	CSE1	P33307	960 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	SHE3	P38272	425 aa	Known RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	YHL050C	P38721	697 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	SPO74	P45819	413 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	ACF4	P47129	309 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	HST1	P53685	503 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	DAK1	P54838	584 aa	Known RBP	2.66	□□□□□ -1.98
PDR11	YIL013C	VPS72	Q03388	795 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	AIM33	Q04516	312 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	ESC2	Q06340	456 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	OPY2	Q06810	360 aa		2.66	□□□□□ -1.98
PDR11	YIL013C	CHO2	P05374	869 aa	Known RBP	2.65	□□□□□ -1.98
PDR11	YIL013C	WHI2	P12611	486 aa		2.65	□□□□□ -1.98
PDR11	YIL013C	SMC1	P32908	1225 aa		2.65	□□□□□ -1.98
PDR11	YIL013C	MIC60	P36112	540 aa		2.65	□□□□□ -1.98
PDR11	YIL013C	SPT8	P38915	602 aa		2.65	□□□□□ -1.98
PDR11	YIL013C	MMF1	P40185	145 aa	Known RBP	2.65	□□□□□ -1.98
PDR11	YIL013C	CCT5	P40413	562 aa	Known RBP	2.65	□□□□□ -1.98
PDR11	YIL013C	CCM1	P48237	864 aa	Predicted RBP	2.65	□□□□□ -1.98
PDR11	YIL013C	UBA2	P52488	636 aa		2.65	□□□□□ -1.98
PDR11	YIL013C	YGR273C	P53329	174 aa		2.65	□□□□□ -1.98
PDR11	YIL013C	PGA2	P53903	129 aa		2.65	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms