RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCD1	YHR003C	ELM1	P32801	640 aa		4.11	□□□□□ -1.75
TCD1	YHR003C	PET112	P33893	541 aa		4.11	□□□□□ -1.75
TCD1	YHR003C	MNR2	P35724	969 aa		4.11	□□□□□ -1.75
TCD1	YHR003C	CCZ1	P38273	704 aa		4.11	□□□□□ -1.75
TCD1	YHR003C	RGD1	P38339	666 aa		4.11	□□□□□ -1.75
TCD1	YHR003C	RPN3	P40016	523 aa	Known RBP	4.11	□□□□□ -1.75
TCD1	YHR003C	CNN1	P43618	361 aa		4.11	□□□□□ -1.75
TCD1	YHR003C	FOL2	P51601	243 aa	Known RBP	4.11	□□□□□ -1.75
TCD1	YHR003C	TNA1	P53322	534 aa		4.11	□□□□□ -1.75
TCD1	YHR003C	HOS3	Q02959	697 aa	Known RBP	4.11	□□□□□ -1.75
TCD1	YHR003C	AOS1	Q06624	347 aa		4.11	□□□□□ -1.75
TCD1	YHR003C	NBA1	Q08229	501 aa	Known RBP	4.11	□□□□□ -1.75
TCD1	YHR003C	SPO21	Q12411	609 aa		4.11	□□□□□ -1.75
TCD1	YHR003C	DBP5	P20449	482 aa	Known RBP	4.1	□□□□□ -1.75
TCD1	YHR003C	SEG2	P34250	1132 aa		4.1	□□□□□ -1.75
TCD1	YHR003C	BAP2	P38084	609 aa		4.1	□□□□□ -1.75
TCD1	YHR003C	GPB2	P39717	880 aa		4.1	□□□□□ -1.75
TCD1	YHR003C	NIT1	P40447	199 aa		4.1	□□□□□ -1.75
TCD1	YHR003C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
TCD1	YHR003C	RSC58	Q07979	502 aa		4.1	□□□□□ -1.75
TCD1	YHR003C	BNI1	P41832	1953 aa		4.1	□□□□□ -1.75
TCD1	YHR003C	AIM26	P32858	118 aa		4.09	□□□□□ -1.75
TCD1	YHR003C	RER2	P35196	286 aa		4.09	□□□□□ -1.75
TCD1	YHR003C	ORC1	P54784	914 aa	Predicted RBP	4.09	□□□□□ -1.75
TCD1	YHR003C	HSL1	P34244	1518 aa		4.09	□□□□□ -1.75
TCD1	YHR003C	THO2	P53552	1597 aa	Known RBP	4.09	□□□□□ -1.75
TCD1	YHR003C	CDC34	P14682	295 aa		4.08	□□□□□ -1.76
TCD1	YHR003C	BPT1	P14772	1559 aa		4.08	□□□□□ -1.76
TCD1	YHR003C	SNF5	P18480	905 aa		4.08	□□□□□ -1.76
TCD1	YHR003C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
TCD1	YHR003C	MLS1	P30952	554 aa		4.08	□□□□□ -1.76
TCD1	YHR003C	PIK1	P39104	1066 aa		4.08	□□□□□ -1.76
TCD1	YHR003C	MET10	P39692	1035 aa		4.08	□□□□□ -1.76
TCD1	YHR003C	HNT2	P49775	206 aa		4.08	□□□□□ -1.76
TCD1	YHR003C	PRP43	P53131	767 aa	Known RBP	4.08	□□□□□ -1.76
TCD1	YHR003C	ENV11	P53246	860 aa		4.08	□□□□□ -1.76
TCD1	YHR003C	SVF1	Q05515	481 aa		4.08	□□□□□ -1.76
TCD1	YHR003C	RCL1	Q08096	367 aa	Predicted RBP	4.08	□□□□□ -1.76
TCD1	YHR003C	PEP1	P32319	1579 aa		4.07	□□□□□ -1.76
TCD1	YHR003C	SPT6	P23615	1451 aa	Known RBP	4.07	□□□□□ -1.76
TCD1	YHR003C	SPS1	P08458	490 aa		4.07	□□□□□ -1.76
TCD1	YHR003C	DUT1	P33317	147 aa		4.07	□□□□□ -1.76
TCD1	YHR003C	MPH1	P40562	993 aa		4.07	□□□□□ -1.76
TCD1	YHR003C	TIF35	Q04067	274 aa	Known RBP	4.07	□□□□□ -1.76
TCD1	YHR003C	RSB1	Q08417	382 aa		4.07	□□□□□ -1.76
TCD1	YHR003C	YER152C	P10356	443 aa		4.06	□□□□□ -1.76
TCD1	YHR003C	CLN2	P20438	545 aa		4.06	□□□□□ -1.76
TCD1	YHR003C	GAS1	P22146	559 aa	Known RBP	4.06	□□□□□ -1.76
TCD1	YHR003C	LYP1	P32487	611 aa		4.06	□□□□□ -1.76
TCD1	YHR003C	TRP2	P00899	507 aa	Known RBP	4.05	□□□□□ -1.76
TCD1	YHR003C	RNQ1	P25367	405 aa		4.05	□□□□□ -1.76
TCD1	YHR003C	TSA1	P34760	196 aa	Known RBP	4.05	□□□□□ -1.76
TCD1	YHR003C	MCM7	P38132	845 aa		4.05	□□□□□ -1.76
TCD1	YHR003C	ETP1	P38748	585 aa	Known RBP	4.05	□□□□□ -1.76
TCD1	YHR003C	SEC26	P41810	973 aa	Known RBP	4.05	□□□□□ -1.76
TCD1	YHR003C	SNU71	P53207	620 aa	Known RBP	4.05	□□□□□ -1.76
TCD1	YHR003C	EEB1	Q02891	456 aa		4.05	□□□□□ -1.76
TCD1	YHR003C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
TCD1	YHR003C	IOC4	Q04213	475 aa		4.05	□□□□□ -1.76
TCD1	YHR003C	CDA2	Q06703	312 aa		4.05	□□□□□ -1.76
TCD1	YHR003C	GNT1	Q12096	491 aa		4.05	□□□□□ -1.76
TCD1	YHR003C	UBP5	P39944	805 aa		4.04	□□□□□ -1.76
TCD1	YHR003C	TYW3	P53177	273 aa		4.04	□□□□□ -1.76
TCD1	YHR003C	YGR053C	P53234	283 aa		4.04	□□□□□ -1.76
TCD1	YHR003C	SNO2	P53823	222 aa		4.04	□□□□□ -1.76
TCD1	YHR003C	MRPL22	P53881	309 aa		4.04	□□□□□ -1.76
TCD1	YHR003C	YDL177C	Q12257	170 aa		4.04	□□□□□ -1.76
TCD1	YHR003C	MAD1	P40957	749 aa		4.03	□□□□□ -1.76
TCD1	YHR003C	KRI1	P42846	591 aa	Known RBP	4.03	□□□□□ -1.76
TCD1	YHR003C	SPO20	Q04359	397 aa		4.03	□□□□□ -1.76
TCD1	YHR003C	RKM4	Q12504	494 aa		4.03	□□□□□ -1.76
TCD1	YHR003C	RPL11A	P0C0W9	174 aa	Known RBP	4.02	□□□□□ -1.77
TCD1	YHR003C	INO1	P11986	533 aa		4.02	□□□□□ -1.77
TCD1	YHR003C	RFC5	P38251	354 aa		4.02	□□□□□ -1.77
TCD1	YHR003C	GEM1	P39722	662 aa		4.02	□□□□□ -1.77
TCD1	YHR003C	SNF7	P39929	240 aa	Known RBP	4.02	□□□□□ -1.77
TCD1	YHR003C	YFL054C	P43549	646 aa		4.02	□□□□□ -1.77
TCD1	YHR003C	JIP5	Q06214	492 aa	Predicted RBP	4.02	□□□□□ -1.77
TCD1	YHR003C	YOR352W	Q08816	343 aa		4.02	□□□□□ -1.77
TCD1	YHR003C	PIN2	Q12057	282 aa		4.02	□□□□□ -1.77
TCD1	YHR003C	RPL11B	Q3E757	174 aa	Predicted RBP	4.02	□□□□□ -1.77
TCD1	YHR003C	MYO2	P19524	1574 aa	Known RBP	4.02	□□□□□ -1.77
TCD1	YHR003C	IRC20	Q06554	1556 aa		4.02	□□□□□ -1.77
TCD1	YHR003C	THS1	P04801	734 aa	Known RBP	4.01	□□□□□ -1.77
TCD1	YHR003C	BAS1	P22035	811 aa		4.01	□□□□□ -1.77
TCD1	YHR003C	YKL107W	P34251	309 aa		4.01	□□□□□ -1.77
TCD1	YHR003C	MXR1	P40029	184 aa		4.01	□□□□□ -1.77
TCD1	YHR003C	FAA4	P47912	694 aa	Known RBP	4.01	□□□□□ -1.77
TCD1	YHR003C	GDE1	Q02979	1223 aa		4.01	□□□□□ -1.77
TCD1	YHR003C	VPS16	Q03308	798 aa		4.01	□□□□□ -1.77
TCD1	YHR003C	RSM24	Q03976	319 aa		4.01	□□□□□ -1.77
TCD1	YHR003C	SPP382	Q06411	708 aa	Predicted RBP	4.01	□□□□□ -1.77
TCD1	YHR003C	ATG13	Q06628	738 aa		4.01	□□□□□ -1.77
TCD1	YHR003C	ACM1	Q08981	209 aa		4.01	□□□□□ -1.77
TCD1	YHR003C	HIR3	P47171	1648 aa		4.01	□□□□□ -1.77
TCD1	YHR003C	YCF1	P39109	1515 aa	Known RBP	4	□□□□□ -1.77
TCD1	YHR003C	SOD2	P00447	233 aa		4	□□□□□ -1.77
TCD1	YHR003C	PRP6	P19735	899 aa	Predicted RBP	4	□□□□□ -1.77
TCD1	YHR003C	MOT2	P34909	587 aa	Known RBP	4	□□□□□ -1.77
TCD1	YHR003C	ABZ1	P37254	787 aa	Predicted RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms