RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFK1	YGR240C	MCD1	Q12158	566 aa		4.88	□□□□□ -1.63
PFK1	YGR240C	RRP36	Q12481	300 aa	Predicted RBP	4.88	□□□□□ -1.63
PFK1	YGR240C	MPD2	Q99316	277 aa		4.88	□□□□□ -1.63
PFK1	YGR240C	YIL166C	P40445	542 aa		4.88	□□□□□ -1.63
PFK1	YGR240C	KXD1	P53158	218 aa		4.88	□□□□□ -1.63
PFK1	YGR240C	COG6	P53959	839 aa		4.88	□□□□□ -1.63
PFK1	YGR240C	GAL1	P04385	528 aa		4.87	□□□□□ -1.63
PFK1	YGR240C	RPC40	P07703	335 aa	Known RBP	4.87	□□□□□ -1.63
PFK1	YGR240C	SRS2	P12954	1174 aa		4.87	□□□□□ -1.63
PFK1	YGR240C	MRE11	P32829	692 aa		4.87	□□□□□ -1.63
PFK1	YGR240C	TMA108	P40462	946 aa		4.87	□□□□□ -1.63
PFK1	YGR240C	PNG1	Q02890	363 aa		4.87	□□□□□ -1.63
PFK1	YGR240C	GLE1	Q12315	538 aa		4.87	□□□□□ -1.63
PFK1	YGR240C	CHS3	P29465	1165 aa		4.87	□□□□□ -1.63
PFK1	YGR240C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
PFK1	YGR240C	VPS8	P39702	1274 aa		4.87	□□□□□ -1.63
PFK1	YGR240C	HUL4	P40985	892 aa		4.87	□□□□□ -1.63
PFK1	YGR240C	GPD2	P41911	440 aa	Known RBP	4.87	□□□□□ -1.63
PFK1	YGR240C	LAM5	P43560	674 aa		4.87	□□□□□ -1.63
PFK1	YGR240C	CCM1	P48237	864 aa	Predicted RBP	4.87	□□□□□ -1.63
PFK1	YGR240C	PTA1	Q01329	785 aa	Predicted RBP	4.87	□□□□□ -1.63
PFK1	YGR240C	HIM1	Q06674	414 aa		4.87	□□□□□ -1.63
PFK1	YGR240C	RKM4	Q12504	494 aa		4.87	□□□□□ -1.63
PFK1	YGR240C	PHO84	P25297	587 aa	Known RBP	4.86	□□□□□ -1.63
PFK1	YGR240C	SFP1	P32432	683 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	DPH2	P32461	534 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	HSM3	P38348	480 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	YHR020W	P38708	688 aa	Known RBP	4.86	□□□□□ -1.63
PFK1	YGR240C	FMP10	P40098	244 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	RIC1	P40395	1056 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	TAN1	P53072	289 aa	Predicted RBP	4.86	□□□□□ -1.63
PFK1	YGR240C	HOP2	P53187	214 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	DSL1	P53847	754 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	NCS2	P53923	493 aa	Predicted RBP	4.86	□□□□□ -1.63
PFK1	YGR240C	SGD1	Q06132	899 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	RSC58	Q07979	502 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	YDR056C	Q12025	205 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	HMI1	Q12039	706 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	RAD59	Q12223	238 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	SRF1	Q12516	437 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	STF1	P01098	86 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	IDI1	P15496	288 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	GUT1	P32190	709 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	MCM10	P32354	571 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	CCL1	P37366	393 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	TIF5	P38431	405 aa	Known RBP	4.86	□□□□□ -1.63
PFK1	YGR240C	SPO1	P53541	631 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	SNZ1	Q03148	297 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	COG8	Q04632	607 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	ATG13	Q06628	738 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	PMT7	Q06644	662 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	MPC54	Q08550	464 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	CYT1	P07143	309 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	KAR2	P16474	682 aa	Known RBP	4.86	□□□□□ -1.63
PFK1	YGR240C	PEP7	P32609	515 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	BOL3	P39724	118 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	YNL034W	P53963	612 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	YNL018C	P53976	612 aa		4.86	□□□□□ -1.63
PFK1	YGR240C	CSR1	Q06705	408 aa	Known RBP	4.86	□□□□□ -1.63
PFK1	YGR240C	YMR084W	A2P2R3	262 aa		4.85	□□□□□ -1.63
PFK1	YGR240C	PRT1	P06103	763 aa	Known RBP	4.85	□□□□□ -1.63
PFK1	YGR240C	KIP2	P28743	706 aa		4.85	□□□□□ -1.63
PFK1	YGR240C	RPT1	P33299	467 aa	Known RBP	4.85	□□□□□ -1.63
PFK1	YGR240C	MNR2	P35724	969 aa		4.85	□□□□□ -1.63
PFK1	YGR240C	LRP1	P38801	184 aa	Known RBP	4.85	□□□□□ -1.63
PFK1	YGR240C	PEX18	P38855	283 aa		4.85	□□□□□ -1.63
PFK1	YGR240C	MET14	Q02196	202 aa		4.85	□□□□□ -1.63
PFK1	YGR240C	SDH5	Q08230	162 aa		4.85	□□□□□ -1.63
PFK1	YGR240C	NEW1	Q08972	1196 aa	Known RBP	4.85	□□□□□ -1.63
PFK1	YGR240C	RPS24A	P0CX31	135 aa	Known RBP	4.85	□□□□□ -1.63
PFK1	YGR240C	RPS24B	P0CX32	135 aa	Known RBP	4.85	□□□□□ -1.63
PFK1	YGR240C	SEC23	P15303	768 aa	Known RBP	4.85	□□□□□ -1.63
PFK1	YGR240C	REC107	P21651	314 aa		4.85	□□□□□ -1.63
PFK1	YGR240C	MCM3	P24279	971 aa	Known RBP	4.85	□□□□□ -1.63
PFK1	YGR240C	SRO9	P25567	434 aa	Known RBP	4.85	□□□□□ -1.63
PFK1	YGR240C	KTR7	P40504	517 aa		4.85	□□□□□ -1.63
PFK1	YGR240C	ALO1	P54783	526 aa	Known RBP	4.85	□□□□□ -1.63
PFK1	YGR240C	PKH3	Q03306	898 aa	Predicted RBP	4.85	□□□□□ -1.63
PFK1	YGR240C	RPN7	Q06103	429 aa	Known RBP	4.85	□□□□□ -1.63
PFK1	YGR240C	SSP2	Q08646	371 aa		4.85	□□□□□ -1.63
PFK1	YGR240C	GAL2	P13181	574 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	SEC2	P17065	759 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	SPO16	P17122	198 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	DIT1	P21623	536 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	QDR1	P40475	563 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	RET2	P43621	546 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	PEX14	P53112	341 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	RPB2	P08518	1224 aa	Known RBP	4.84	□□□□□ -1.63
PFK1	YGR240C	ERR1	P0CX10	437 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	ERR2	P0CX11	437 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	MRM1	P25270	412 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	GCD6	P32501	712 aa	Known RBP	4.84	□□□□□ -1.63
PFK1	YGR240C	RIB7	P33312	244 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	PET112	P33893	541 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	PCL7	P40186	285 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	JEM1	P40358	645 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	UTP18	P40362	594 aa	Predicted RBP	4.84	□□□□□ -1.63
PFK1	YGR240C	HLJ1	P48353	224 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	YNR063W	P53749	607 aa		4.84	□□□□□ -1.63
PFK1	YGR240C	RAT1	Q02792	1006 aa	Known RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms