RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	YJR008W	P47085	338 aa		6.66	□□□□□ -1.34
SKI8	YGL213C	HSV2	P50079	448 aa	Predicted RBP	6.66	□□□□□ -1.34
SKI8	YGL213C	ALG6	Q12001	544 aa	Known RBP	6.66	□□□□□ -1.34
SKI8	YGL213C	NFS1	P25374	497 aa		6.65	□□□□□ -1.34
SKI8	YGL213C	MET22	P32179	357 aa		6.65	□□□□□ -1.34
SKI8	YGL213C	GEM1	P39722	662 aa		6.65	□□□□□ -1.34
SKI8	YGL213C	YIR007W	P40566	764 aa		6.65	□□□□□ -1.34
SKI8	YGL213C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	6.65	□□□□□ -1.34	not detected
SKI8	YGL213C	SPP382	Q06411	708 aa	Predicted RBP	6.65	□□□□□ -1.34
SKI8	YGL213C	NTG2	Q08214	380 aa		6.65	□□□□□ -1.34
SKI8	YGL213C	GNT1	Q12096	491 aa		6.65	□□□□□ -1.34
SKI8	YGL213C	SLP1	Q12232	587 aa		6.65	□□□□□ -1.34
SKI8	YGL213C	ADR1	P07248	1323 aa		6.65	□□□□□ -1.35
SKI8	YGL213C	TOM70	P07213	617 aa	Known RBP	6.64	□□□□□ -1.35
SKI8	YGL213C	PDC5	P16467	563 aa	Known RBP	6.64	□□□□□ -1.35
SKI8	YGL213C	UBP12	P39538	1254 aa		6.64	□□□□□ -1.35
SKI8	YGL213C	POL5	P39985	1022 aa	Known RBP	6.64	□□□□□ -1.35
SKI8	YGL213C	VPS53	P47061	822 aa		6.64	□□□□□ -1.35
SKI8	YGL213C	GIS4	Q04233	774 aa		6.64	□□□□□ -1.35
SKI8	YGL213C	YDR306C	Q06640	478 aa		6.64	□□□□□ -1.35
SKI8	YGL213C	ELG1	Q12050	791 aa		6.64	□□□□□ -1.35
SKI8	YGL213C	NAR1	P23503	491 aa	Known RBP	6.63	□□□□□ -1.35
SKI8	YGL213C	KNS1	P32350	737 aa	Predicted RBP	6.63	□□□□□ -1.35
SKI8	YGL213C	AAR2	P32357	355 aa	Predicted RBP	6.63	□□□□□ -1.35
SKI8	YGL213C	ALG14	P38242	237 aa		6.63	□□□□□ -1.35
SKI8	YGL213C	YEN1	P40028	759 aa		6.63	□□□□□ -1.35
SKI8	YGL213C	HBN1	Q96VH4	193 aa		6.63	□□□□□ -1.35
SKI8	YGL213C	RPL8A	P17076	256 aa	Known RBP	6.62	□□□□□ -1.35
SKI8	YGL213C	YBR284W	P38150	797 aa		6.62	□□□□□ -1.35
SKI8	YGL213C	GDH3	P39708	457 aa		6.62	□□□□□ -1.35
SKI8	YGL213C	SIP5	P40210	489 aa	Known RBP	6.62	□□□□□ -1.35
SKI8	YGL213C	YGR045C	P53229	120 aa		6.62	□□□□□ -1.35
SKI8	YGL213C	RTS3	P53289	263 aa		6.62	□□□□□ -1.35
SKI8	YGL213C	CAF120	P53836	1060 aa		6.62	□□□□□ -1.35
SKI8	YGL213C	UGO1	Q03327	502 aa		6.62	□□□□□ -1.35
SKI8	YGL213C	GIC2	Q06648	383 aa		6.62	□□□□□ -1.35
SKI8	YGL213C	GPM1	P00950	247 aa	Known RBP	6.61	□□□□□ -1.35
SKI8	YGL213C	ERS1	P17261	260 aa		6.61	□□□□□ -1.35
SKI8	YGL213C	PPH3	P32345	308 aa		6.61	□□□□□ -1.35
SKI8	YGL213C	HBS1	P32769	611 aa	Known RBP	6.61	□□□□□ -1.35
SKI8	YGL213C	PEX6	P33760	1030 aa		6.61	□□□□□ -1.35
SKI8	YGL213C	MAE1	P36013	669 aa	Known RBP	6.61	□□□□□ -1.35
SKI8	YGL213C	PGM2	P37012	569 aa	Known RBP	6.61	□□□□□ -1.35
SKI8	YGL213C	ACO2	P39533	789 aa		6.61	□□□□□ -1.35
SKI8	YGL213C	ELA1	P53861	379 aa	Predicted RBP	6.61	□□□□□ -1.35
SKI8	YGL213C	DOM34	P33309	386 aa		6.6	□□□□□ -1.35
SKI8	YGL213C	HLJ1	P48353	224 aa		6.6	□□□□□ -1.35
SKI8	YGL213C	YNR029C	P53729	429 aa	Known RBP	6.6	□□□□□ -1.35
SKI8	YGL213C	TFB2	Q02939	513 aa		6.6	□□□□□ -1.35
SKI8	YGL213C	YPL260W	Q08977	551 aa		6.6	□□□□□ -1.35
SKI8	YGL213C	TY4B-P	A0A0B7P3V8	1104 aa		6.59	□□□□□ -1.35
SKI8	YGL213C	TOP3	P13099	656 aa		6.59	□□□□□ -1.35
SKI8	YGL213C	QNS1	P38795	714 aa	Known RBP	6.59	□□□□□ -1.35
SKI8	YGL213C	ZDS1	P50111	915 aa	Known RBP	6.59	□□□□□ -1.35
SKI8	YGL213C	DUS3	Q06053	668 aa	Known RBP	6.59	□□□□□ -1.35
SKI8	YGL213C	SPO21	Q12411	609 aa		6.59	□□□□□ -1.35
SKI8	YGL213C	TY4A-H	Q6Q5P6	413 aa		6.59	□□□□□ -1.35
SKI8	YGL213C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.58	□□□□□ -1.36	not detected
SKI8	YGL213C	KIP3	P53086	805 aa	Known RBP	6.58	□□□□□ -1.36
SKI8	YGL213C	DSE4	P53753	1117 aa		6.58	□□□□□ -1.36
SKI8	YGL213C	RSA3	Q05942	220 aa	Known RBP	6.58	□□□□□ -1.36
SKI8	YGL213C	YOR223W	Q12015	292 aa		6.58	□□□□□ -1.36
SKI8	YGL213C	YPR071W	Q12346	211 aa		6.58	□□□□□ -1.36
SKI8	YGL213C	NHA1	Q99271	985 aa		6.58	□□□□□ -1.36
SKI8	YGL213C	YER152C	P10356	443 aa		6.57	□□□□□ -1.36
SKI8	YGL213C	RET1	P22276	1149 aa	Known RBP	6.57	□□□□□ -1.36
SKI8	YGL213C	GAR1	P28007	205 aa	Known RBP	6.57	□□□□□ -1.36
SKI8	YGL213C	KIP1	P28742	1111 aa		6.57	□□□□□ -1.36
SKI8	YGL213C	DSS1	P39112	969 aa		6.57	□□□□□ -1.36
SKI8	YGL213C	UBP6	P43593	499 aa	Known RBP	6.57	□□□□□ -1.36
SKI8	YGL213C	DOT1	Q04089	582 aa	Known RBP	6.57	□□□□□ -1.36
SKI8	YGL213C	ADE8	P04161	214 aa		6.56	□□□□□ -1.36
SKI8	YGL213C	MSD1	P15179	658 aa	Known RBP	6.56	□□□□□ -1.36
SKI8	YGL213C	PNT1	P38969	423 aa		6.56	□□□□□ -1.36
SKI8	YGL213C	MAL11	P53048	616 aa		6.56	□□□□□ -1.36
SKI8	YGL213C	YLR257W	Q06146	321 aa	Known RBP	6.56	□□□□□ -1.36
SKI8	YGL213C	RPL11A	P0C0W9	174 aa	Known RBP	6.55	□□□□□ -1.36
SKI8	YGL213C	GSY1	P23337	708 aa		6.55	□□□□□ -1.36
SKI8	YGL213C	NNK1	P36003	928 aa		6.55	□□□□□ -1.36
SKI8	YGL213C	PET10	P36139	283 aa		6.55	□□□□□ -1.36
SKI8	YGL213C	YRO2	P38079	344 aa		6.55	□□□□□ -1.36
SKI8	YGL213C	GPB2	P39717	880 aa		6.55	□□□□□ -1.36
SKI8	YGL213C	ATG36	P46983	293 aa		6.55	□□□□□ -1.36
SKI8	YGL213C	YPL062W	Q02781	134 aa		6.55	□□□□□ -1.36
SKI8	YGL213C	SRP1	Q02821	542 aa	Known RBP	6.55	□□□□□ -1.36
SKI8	YGL213C	ATG13	Q06628	738 aa		6.55	□□□□□ -1.36
SKI8	YGL213C	RPL11B	Q3E757	174 aa	Predicted RBP	6.55	□□□□□ -1.36
SKI8	YGL213C	RAD53	P22216	821 aa		6.54	□□□□□ -1.36
SKI8	YGL213C	SIT1	P39980	628 aa		6.54	□□□□□ -1.36
SKI8	YGL213C	MXR1	P40029	184 aa		6.54	□□□□□ -1.36
SKI8	YGL213C	YNL193W	P53870	558 aa		6.54	□□□□□ -1.36
SKI8	YGL213C	HRK1	Q08732	759 aa	Known RBP	6.54	□□□□□ -1.36
SKI8	YGL213C	MDM12	Q92328	271 aa		6.54	□□□□□ -1.36
SKI8	YGL213C	TOP1	P04786	769 aa		6.53	□□□□□ -1.36
SKI8	YGL213C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.53	□□□□□ -1.36	not detected
SKI8	YGL213C	DBP2	P24783	546 aa	Known RBP	6.53	□□□□□ -1.36
SKI8	YGL213C	MEF1	P25039	761 aa		6.53	□□□□□ -1.36
SKI8	YGL213C	ALG2	P43636	503 aa		6.53	□□□□□ -1.36
SKI8	YGL213C	PMT3	P47190	753 aa		6.53	□□□□□ -1.36
SKI8	YGL213C	YGR237C	P50089	785 aa		6.53	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms