RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C HUL4P40985 892 aa3.41□□□□□ -1.86
PRE4YFR050C BUD27P43573 796 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
PRE4YFR050C SKP1P52286 194 aa3.41□□□□□ -1.86
PRE4YFR050C PRP43P53131 767 aaKnown RBP3.41□□□□□ -1.86
PRE4YFR050C YOR296WQ08748 1289 aa3.41□□□□□ -1.86
PRE4YFR050C ISW1P38144 1129 aa3.4□□□□□ -1.87
PRE4YFR050C GLO3P38682 493 aaKnown RBP3.4□□□□□ -1.87
PRE4YFR050C BOL3P39724 118 aa3.4□□□□□ -1.87
PRE4YFR050C HXT8P40886 569 aa3.4□□□□□ -1.87
PRE4YFR050C CCH1P50077 2039 aa3.4□□□□□ -1.87
PRE4YFR050C UBP16Q02863 499 aa3.4□□□□□ -1.87
PRE4YFR050C TY1A-DR2Q03964 440 aaKnown RBP3.4□□□□□ -1.87
PRE4YFR050C THI72Q08579 599 aa3.4□□□□□ -1.87
PRE4YFR050C GPM1P00950 247 aaKnown RBP3.39□□□□□ -1.87
PRE4YFR050C PDC5P16467 563 aaKnown RBP3.39□□□□□ -1.87
PRE4YFR050C RPB10P22139 70 aa3.39□□□□□ -1.87
PRE4YFR050C NSG2P53898 299 aa3.39□□□□□ -1.87
PRE4YFR050C MSN1P22148 382 aa3.38□□□□□ -1.87
PRE4YFR050C KNS1P32350 737 aaPredicted RBP3.38□□□□□ -1.87
PRE4YFR050C FRD1P32614 470 aaKnown RBP3.38□□□□□ -1.87
PRE4YFR050C MET1P36150 593 aa3.38□□□□□ -1.87
PRE4YFR050C QDR1P40475 563 aa3.38□□□□□ -1.87
PRE4YFR050C RAT1Q02792 1006 aaKnown RBP3.38□□□□□ -1.87
PRE4YFR050C SSL1Q04673 461 aaPredicted RBP3.38□□□□□ -1.87
PRE4YFR050C RSC2Q06488 889 aa3.38□□□□□ -1.87
PRE4YFR050C RRG1Q12167 365 aaPredicted RBP3.38□□□□□ -1.87
PRE4YFR050C HAT1Q12341 374 aa3.38□□□□□ -1.87
PRE4YFR050C LSO1Q3E827 93 aa3.38□□□□□ -1.87
PRE4YFR050C UTP10P42945 1769 aaKnown RBP3.38□□□□□ -1.87
PRE4YFR050C FLO11P08640 1367 aa3.38□□□□□ -1.87
PRE4YFR050C TRP2P00899 507 aaKnown RBP3.37□□□□□ -1.87
PRE4YFR050C BCS1P32839 456 aa3.37□□□□□ -1.87
PRE4YFR050C SMC1P32908 1225 aa3.37□□□□□ -1.87
PRE4YFR050C RAD55P38953 406 aa3.37□□□□□ -1.87
PRE4YFR050C PRK1P40494 810 aa3.37□□□□□ -1.87
PRE4YFR050C LSB3P43603 459 aaKnown RBP3.37□□□□□ -1.87
PRE4YFR050C YJR107WP47145 328 aa3.37□□□□□ -1.87
PRE4YFR050C ITC1P53125 1264 aa3.37□□□□□ -1.87
PRE4YFR050C YNR040WP53736 256 aa3.37□□□□□ -1.87
PRE4YFR050C BIO5P53744 561 aaKnown RBP3.37□□□□□ -1.87
PRE4YFR050C PUS1Q12211 544 aaKnown RBP3.37□□□□□ -1.87
PRE4YFR050C PHM7Q12252 991 aa3.37□□□□□ -1.87
PRE4YFR050C IDI1P15496 288 aa3.36□□□□□ -1.87
PRE4YFR050C PFK2P16862 959 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
PRE4YFR050C NAB2P32505 525 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
PRE4YFR050C MDJ1P35191 511 aa3.36□□□□□ -1.87
PRE4YFR050C ARP1P38696 384 aa3.36□□□□□ -1.87
PRE4YFR050C AIM46P38885 310 aa3.36□□□□□ -1.87
PRE4YFR050C BOI2P39969 1040 aa3.36□□□□□ -1.87
PRE4YFR050C SBE2P42223 864 aaKnown RBP3.36□□□□□ -1.87
PRE4YFR050C SEN54Q02825 467 aaPredicted RBP3.36□□□□□ -1.87
PRE4YFR050C PPM2Q08282 695 aa3.36□□□□□ -1.87
PRE4YFR050C APC11Q12157 165 aa3.36□□□□□ -1.87
PRE4YFR050C GIN4Q12263 1142 aa3.36□□□□□ -1.87
PRE4YFR050C YDR524C-BQ3E6R4 66 aa3.36□□□□□ -1.87
PRE4YFR050C CAD1P24813 409 aaKnown RBP3.35□□□□□ -1.87
PRE4YFR050C MIC60P36112 540 aa3.35□□□□□ -1.87
PRE4YFR050C ALG14P38242 237 aa3.35□□□□□ -1.87
PRE4YFR050C KSP1P38691 1029 aaKnown RBP3.35□□□□□ -1.87
PRE4YFR050C ICP55P40051 511 aa3.35□□□□□ -1.87
PRE4YFR050C NIT1P40447 199 aa3.35□□□□□ -1.87
PRE4YFR050C INP52P50942 1183 aa3.35□□□□□ -1.87
PRE4YFR050C FOL2P51601 243 aaKnown RBP3.35□□□□□ -1.87
PRE4YFR050C PPT1P53043 513 aa3.35□□□□□ -1.87
PRE4YFR050C YBP2P53169 641 aa3.35□□□□□ -1.87
PRE4YFR050C UFD2P54860 961 aa3.35□□□□□ -1.87
PRE4YFR050C TY3A-GQ12173 290 aa3.35□□□□□ -1.87
PRE4YFR050C YBL113CQ7M4S9 792 aa3.35□□□□□ -1.87
PRE4YFR050C TY3A-IQ99219 290 aa3.35□□□□□ -1.87
PRE4YFR050C HFA1P32874 2273 aa3.35□□□□□ -1.87
PRE4YFR050C URK1P27515 501 aa3.34□□□□□ -1.87
PRE4YFR050C PGM2P37012 569 aaKnown RBP3.34□□□□□ -1.87
PRE4YFR050C ERP5P38819 212 aa3.34□□□□□ -1.87
PRE4YFR050C NTA1P40354 457 aa3.34□□□□□ -1.87
PRE4YFR050C YIL165CP40446 119 aa3.34□□□□□ -1.87
PRE4YFR050C RGD2P43556 714 aa3.34□□□□□ -1.87
PRE4YFR050C MTC3P53077 123 aa3.34□□□□□ -1.87
PRE4YFR050C TDA6Q06466 467 aa3.34□□□□□ -1.87
PRE4YFR050C NHA1Q99271 985 aa3.34□□□□□ -1.87
PRE4YFR050C CDC60P26637 1090 aaKnown RBP3.33□□□□□ -1.88
PRE4YFR050C SER1P33330 395 aaKnown RBP3.33□□□□□ -1.88
PRE4YFR050C IRS4P36115 615 aaKnown RBP3.33□□□□□ -1.88
PRE4YFR050C ECM2P38241 364 aaKnown RBP3.33□□□□□ -1.88
PRE4YFR050C PSY2P40164 858 aa3.33□□□□□ -1.88
PRE4YFR050C NET1P47035 1189 aa3.33□□□□□ -1.88
PRE4YFR050C ACF4P47129 309 aa3.33□□□□□ -1.88
PRE4YFR050C NRD1P53617 575 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
PRE4YFR050C YNL034WP53963 612 aa3.33□□□□□ -1.88
PRE4YFR050C YNL018CP53976 612 aa3.33□□□□□ -1.88
PRE4YFR050C EMG1Q06287 252 aaKnown RBP3.33□□□□□ -1.88
PRE4YFR050C INP54Q08227 384 aaKnown RBP3.33□□□□□ -1.88
PRE4YFR050C YPR053CQ6Q5F3 151 aa3.33□□□□□ -1.88
PRE4YFR050C AUS1Q08409 1394 aa3.33□□□□□ -1.88
PRE4YFR050C NAR1P23503 491 aaKnown RBP3.32□□□□□ -1.88
PRE4YFR050C HCM1P25364 564 aa3.32□□□□□ -1.88
PRE4YFR050C SFB3P38810 929 aa3.32□□□□□ -1.88
PRE4YFR050C FMP10P40098 244 aa3.32□□□□□ -1.88
PRE4YFR050C YFL066CP43538 392 aa3.32□□□□□ -1.88
PRE4YFR050C YMR187CQ03236 431 aa3.32□□□□□ -1.88
PRE4YFR050C TAF8Q03750 510 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms