RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD4	YER162C	ATE1	P16639	503 aa		4.15	□□□□□ -1.75
RAD4	YER162C	NFU1	P32860	256 aa		4.15	□□□□□ -1.75
RAD4	YER162C	MCR1	P36060	302 aa	Known RBP	4.15	□□□□□ -1.75
RAD4	YER162C	FUI1	P38196	639 aa		4.15	□□□□□ -1.75
RAD4	YER162C	RTS1	P38903	757 aa		4.15	□□□□□ -1.75
RAD4	YER162C	AZR1	P50080	613 aa		4.15	□□□□□ -1.75
RAD4	YER162C	KAR5	Q04746	504 aa		4.15	□□□□□ -1.75
RAD4	YER162C	MAG2	Q06436	670 aa	Known RBP	4.15	□□□□□ -1.75
RAD4	YER162C	MYO1	P08964	1928 aa		4.15	□□□□□ -1.75
RAD4	YER162C	HSP82	P02829	709 aa	Known RBP	4.14	□□□□□ -1.75
RAD4	YER162C	AFT1	P22149	690 aa		4.14	□□□□□ -1.75
RAD4	YER162C	TKL1	P23254	680 aa	Known RBP	4.14	□□□□□ -1.75
RAD4	YER162C	NMD3	P38861	518 aa	Known RBP	4.14	□□□□□ -1.75
RAD4	YER162C	VAC8	P39968	578 aa		4.14	□□□□□ -1.75
RAD4	YER162C	SGM1	P47166	707 aa		4.14	□□□□□ -1.75
RAD4	YER162C	MET13	P53128	600 aa		4.14	□□□□□ -1.75
RAD4	YER162C	YGL039W	P53183	348 aa	Known RBP	4.14	□□□□□ -1.75
RAD4	YER162C	RRP15	Q06511	250 aa	Predicted RBP	4.14	□□□□□ -1.75
RAD4	YER162C	TY1B-A	O13527	1196 aa	Known RBP	4.14	□□□□□ -1.75
RAD4	YER162C	SAM1	P10659	382 aa	Known RBP	4.14	□□□□□ -1.75
RAD4	YER162C	CAD1	P24813	409 aa	Known RBP	4.14	□□□□□ -1.75
RAD4	YER162C	URK1	P27515	501 aa		4.14	□□□□□ -1.75
RAD4	YER162C	CHS3	P29465	1165 aa		4.14	□□□□□ -1.75
RAD4	YER162C	ALD5	P40047	520 aa	Known RBP	4.14	□□□□□ -1.75
RAD4	YER162C	FMP10	P40098	244 aa		4.14	□□□□□ -1.75
RAD4	YER162C	MDM1	Q01846	1127 aa		4.14	□□□□□ -1.75
RAD4	YER162C	PUS1	Q12211	544 aa	Known RBP	4.14	□□□□□ -1.75
RAD4	YER162C	YBL113C	Q7M4S9	792 aa		4.14	□□□□□ -1.75
RAD4	YER162C	FKS1	P38631	1876 aa	Known RBP	4.13	□□□□□ -1.75
RAD4	YER162C	SAM2	P19358	384 aa	Known RBP	4.13	□□□□□ -1.75
RAD4	YER162C	SUI2	P20459	304 aa	Known RBP	4.13	□□□□□ -1.75
RAD4	YER162C	FUB1	P25659	250 aa		4.13	□□□□□ -1.75
RAD4	YER162C	TFC3	P34111	1160 aa		4.13	□□□□□ -1.75
RAD4	YER162C	VPS24	P36095	224 aa	Known RBP	4.13	□□□□□ -1.75
RAD4	YER162C	IRC8	P47046	822 aa		4.13	□□□□□ -1.75
RAD4	YER162C	INP52	P50942	1183 aa		4.13	□□□□□ -1.75
RAD4	YER162C	YNL115C	P53925	644 aa		4.13	□□□□□ -1.75
RAD4	YER162C	HEH2	Q03281	663 aa		4.13	□□□□□ -1.75
RAD4	YER162C	MSC2	Q03455	724 aa		4.13	□□□□□ -1.75
RAD4	YER162C	MRPL32	P25348	183 aa		4.12	□□□□□ -1.75
RAD4	YER162C	DPB3	P27344	201 aa		4.12	□□□□□ -1.75
RAD4	YER162C	SWI3	P32591	825 aa		4.12	□□□□□ -1.75
RAD4	YER162C	KTR3	P38130	404 aa	Predicted RBP	4.12	□□□□□ -1.75
RAD4	YER162C	YHL050C	P38721	697 aa		4.12	□□□□□ -1.75
RAD4	YER162C	HUL4	P40985	892 aa		4.12	□□□□□ -1.75
RAD4	YER162C	CSN12	P47130	423 aa		4.12	□□□□□ -1.75
RAD4	YER162C	YGL242C	P53066	181 aa		4.12	□□□□□ -1.75
RAD4	YER162C	EMI2	Q04409	500 aa	Known RBP	4.12	□□□□□ -1.75
RAD4	YER162C	DUS3	Q06053	668 aa	Known RBP	4.12	□□□□□ -1.75
RAD4	YER162C	PUP1	P25043	261 aa		4.12	□□□□□ -1.75
RAD4	YER162C	MET1	P36150	593 aa		4.12	□□□□□ -1.75
RAD4	YER162C	MUM2	P38236	366 aa		4.12	□□□□□ -1.75
RAD4	YER162C	TVP23	P38962	199 aa		4.12	□□□□□ -1.75
RAD4	YER162C	UBP9	P39967	754 aa		4.12	□□□□□ -1.75
RAD4	YER162C	VID27	P40157	782 aa		4.12	□□□□□ -1.75
RAD4	YER162C	REF2	P42073	533 aa	Predicted RBP	4.12	□□□□□ -1.75
RAD4	YER162C	MMR1	Q06324	491 aa		4.12	□□□□□ -1.75
RAD4	YER162C	NCB2	Q92317	146 aa		4.12	□□□□□ -1.75
RAD4	YER162C	HSC82	P15108	705 aa	Known RBP	4.11	□□□□□ -1.75
RAD4	YER162C	SHP1	P34223	423 aa		4.11	□□□□□ -1.75
RAD4	YER162C	FLR1	P38124	548 aa		4.11	□□□□□ -1.75
RAD4	YER162C	PPX1	P38698	397 aa		4.11	□□□□□ -1.75
RAD4	YER162C	EPS1	P40557	701 aa		4.11	□□□□□ -1.75
RAD4	YER162C	YJL045W	P47052	634 aa		4.11	□□□□□ -1.75
RAD4	YER162C	YJR142W	P47173	342 aa		4.11	□□□□□ -1.75
RAD4	YER162C	SVL3	Q03088	825 aa	Known RBP	4.11	□□□□□ -1.75
RAD4	YER162C	ESF1	Q06344	628 aa	Known RBP	4.11	□□□□□ -1.75
RAD4	YER162C	CUP1-1	P0CX80	61 aa		4.11	□□□□□ -1.75
RAD4	YER162C	CUP1-2	P0CX81	61 aa		4.11	□□□□□ -1.75
RAD4	YER162C	MAS2	P11914	482 aa		4.11	□□□□□ -1.75
RAD4	YER162C	REG2	P38232	338 aa		4.11	□□□□□ -1.75
RAD4	YER162C	MNN1	P39106	762 aa		4.11	□□□□□ -1.75
RAD4	YER162C	YEN1	P40028	759 aa		4.11	□□□□□ -1.75
RAD4	YER162C	BDP1	P46678	594 aa		4.11	□□□□□ -1.75
RAD4	YER162C	GDE1	Q02979	1223 aa		4.11	□□□□□ -1.75
RAD4	YER162C	VMS1	Q04311	632 aa	Known RBP	4.11	□□□□□ -1.75
RAD4	YER162C	ATG11	Q12527	1178 aa		4.11	□□□□□ -1.75
RAD4	YER162C	MSD1	P15179	658 aa	Known RBP	4.1	□□□□□ -1.75
RAD4	YER162C	VMA1	P17255	1071 aa	Known RBP	4.1	□□□□□ -1.75
RAD4	YER162C	YBL036C	P38197	257 aa		4.1	□□□□□ -1.75
RAD4	YER162C	YDR341C	Q05506	607 aa	Known RBP	4.1	□□□□□ -1.75
RAD4	YER162C	TEL1	P38110	2787 aa		4.1	□□□□□ -1.75
RAD4	YER162C	RME1	P32338	300 aa	Known RBP	4.1	□□□□□ -1.75
RAD4	YER162C	OSH3	P38713	996 aa	Known RBP	4.1	□□□□□ -1.75
RAD4	YER162C	ERP5	P38819	212 aa		4.1	□□□□□ -1.75
RAD4	YER162C	OPT1	P40897	799 aa		4.1	□□□□□ -1.75
RAD4	YER162C	BBC1	P47068	1157 aa		4.1	□□□□□ -1.75
RAD4	YER162C	ENP2	P48234	707 aa	Known RBP	4.1	□□□□□ -1.75
RAD4	YER162C	MLC1	P53141	149 aa		4.1	□□□□□ -1.75
RAD4	YER162C	FOL1	P53848	824 aa		4.1	□□□□□ -1.75
RAD4	YER162C	TAH18	Q12181	623 aa		4.1	□□□□□ -1.75
RAD4	YER162C	CLF1	Q12309	687 aa	Predicted RBP	4.1	□□□□□ -1.75
RAD4	YER162C	RIF1	P29539	1916 aa		4.09	□□□□□ -1.75
RAD4	YER162C	SMY2	P32909	740 aa	Known RBP	4.09	□□□□□ -1.75
RAD4	YER162C	YNG2	P38806	282 aa	Known RBP	4.09	□□□□□ -1.75
RAD4	YER162C	YHR219W	P38900	624 aa		4.09	□□□□□ -1.75
RAD4	YER162C	VPS8	P39702	1274 aa		4.09	□□□□□ -1.75
RAD4	YER162C	FAF1	P40546	346 aa	Predicted RBP	4.09	□□□□□ -1.75
RAD4	YER162C	PTA1	Q01329	785 aa	Predicted RBP	4.09	□□□□□ -1.75
RAD4	YER162C	CUS1	Q02554	436 aa	Predicted RBP	4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms