RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN3YER021W MNR2P35724 969 aa4.55□□□□□ -1.68
RPN3YER021W YAR028WP39548 234 aa4.55□□□□□ -1.68
RPN3YER021W MSH4P40965 878 aaPredicted RBP4.55□□□□□ -1.68
RPN3YER021W SIW14P53965 281 aa4.55□□□□□ -1.68
RPN3YER021W EST2Q06163 884 aa4.55□□□□□ -1.68
RPN3YER021W RTT10Q08924 1013 aa4.55□□□□□ -1.68
RPN3YER021W NUP170P38181 1502 aa4.55□□□□□ -1.68
RPN3YER021W CDC34P14682 295 aa4.54□□□□□ -1.68
RPN3YER021W PUB1P32588 453 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
RPN3YER021W ELM1P32801 640 aa4.54□□□□□ -1.68
RPN3YER021W NOP7P53261 605 aaKnown RBP4.54□□□□□ -1.68
RPN3YER021W YNR063WP53749 607 aa4.54□□□□□ -1.68
RPN3YER021W ROD1Q02805 837 aa4.54□□□□□ -1.68
RPN3YER021W VPS16Q03308 798 aa4.54□□□□□ -1.68
RPN3YER021W RKM2Q03942 479 aa4.54□□□□□ -1.68
RPN3YER021W GIC2Q06648 383 aa4.54□□□□□ -1.68
RPN3YER021W PUF3Q07807 879 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
RPN3YER021W PIN2Q12057 282 aa4.54□□□□□ -1.68
RPN3YER021W RPO21P04050 1733 aaKnown RBP4.54□□□□□ -1.68
RPN3YER021W TOP2P06786 1428 aaKnown RBP4.53□□□□□ -1.68
RPN3YER021W AFG2P32794 780 aa4.53□□□□□ -1.68
RPN3YER021W SAF1P38352 637 aa4.53□□□□□ -1.68
RPN3YER021W BRE4Q07660 1125 aa4.53□□□□□ -1.68
RPN3YER021W TY1B-JR2P47100 1755 aaKnown RBP4.53□□□□□ -1.68
RPN3YER021W TY1B-ER2Q03619 1755 aa4.53□□□□□ -1.68
RPN3YER021W TY1B-MR1Q04214 1755 aa4.53□□□□□ -1.68
RPN3YER021W TY1B-MR2Q04670 1755 aaKnown RBP4.53□□□□□ -1.68
RPN3YER021W TY1B-LR1Q12088 1755 aaKnown RBP4.53□□□□□ -1.68
RPN3YER021W TY1B-NL1Q12112 1755 aa4.53□□□□□ -1.68
RPN3YER021W TY1B-GR1Q12141 1755 aa4.53□□□□□ -1.68
RPN3YER021W TY1B-BLQ12490 1755 aa4.53□□□□□ -1.68
RPN3YER021W CLN2P20438 545 aa4.53□□□□□ -1.69
RPN3YER021W NAP1P25293 417 aaKnown RBP4.53□□□□□ -1.69
RPN3YER021W MKK2P32491 506 aa4.53□□□□□ -1.69
RPN3YER021W SMY2P32909 740 aaKnown RBP4.53□□□□□ -1.69
RPN3YER021W ATG14P38270 344 aa4.53□□□□□ -1.69
RPN3YER021W MET10P39692 1035 aa4.53□□□□□ -1.69
RPN3YER021W ENT3P47160 408 aa4.53□□□□□ -1.69
RPN3YER021W ALT1P52893 592 aa4.53□□□□□ -1.69
RPN3YER021W MAG2Q06436 670 aaKnown RBP4.53□□□□□ -1.69
RPN3YER021W SPO14P36126 1683 aa4.52□□□□□ -1.69
RPN3YER021W MAD1P40957 749 aa4.52□□□□□ -1.69
RPN3YER021W YGR130CP53278 816 aa4.52□□□□□ -1.69
RPN3YER021W RAT1Q02792 1006 aaKnown RBP4.52□□□□□ -1.69
RPN3YER021W LAP2Q10740 671 aa4.52□□□□□ -1.69
RPN3YER021W DOP1Q03921 1698 aa4.52□□□□□ -1.69
RPN3YER021W RPS4AP0CX35 261 aaKnown RBP4.51□□□□□ -1.69
RPN3YER021W RPS4BP0CX36 261 aaKnown RBP4.51□□□□□ -1.69
RPN3YER021W RET1P22276 1149 aaKnown RBP4.51□□□□□ -1.69
RPN3YER021W NFS1P25374 497 aa4.51□□□□□ -1.69
RPN3YER021W RER2P35196 286 aa4.51□□□□□ -1.69
RPN3YER021W NNK1P36003 928 aa4.51□□□□□ -1.69
RPN3YER021W FAA4P47912 694 aaKnown RBP4.51□□□□□ -1.69
RPN3YER021W EEB1Q02891 456 aa4.51□□□□□ -1.69
RPN3YER021W EAR1Q03212 550 aa4.51□□□□□ -1.69
RPN3YER021W RSA3Q05942 220 aaKnown RBP4.51□□□□□ -1.69
RPN3YER021W HSE1P38753 452 aa4.5□□□□□ -1.69
RPN3YER021W YGR053CP53234 283 aa4.5□□□□□ -1.69
RPN3YER021W YLR257WQ06146 321 aaKnown RBP4.5□□□□□ -1.69
RPN3YER021W TMA46Q12000 345 aaKnown RBP4.5□□□□□ -1.69
RPN3YER021W CHS2P14180 963 aa4.49□□□□□ -1.69
RPN3YER021W RAD27P26793 382 aa4.49□□□□□ -1.69
RPN3YER021W WHI3P34761 661 aaKnown RBP4.49□□□□□ -1.69
RPN3YER021W ALG3P38179 458 aa4.49□□□□□ -1.69
RPN3YER021W QNS1P38795 714 aaKnown RBP4.49□□□□□ -1.69
RPN3YER021W NMD3P38861 518 aaKnown RBP4.49□□□□□ -1.69
RPN3YER021W MMM1P41800 426 aa4.49□□□□□ -1.69
RPN3YER021W ALD6P54115 500 aaKnown RBP4.49□□□□□ -1.69
RPN3YER021W GDE1Q02979 1223 aa4.49□□□□□ -1.69
RPN3YER021W PTC5Q12511 572 aa4.49□□□□□ -1.69
RPN3YER021W TRP2P00899 507 aaKnown RBP4.48□□□□□ -1.69
RPN3YER021W SYP1P25623 870 aaKnown RBP4.48□□□□□ -1.69
RPN3YER021W VAC8P39968 578 aa4.48□□□□□ -1.69
RPN3YER021W VPS53P47061 822 aa4.48□□□□□ -1.69
RPN3YER021W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
RPN3YER021W UBP5P39944 805 aa4.48□□□□□ -1.69
RPN3YER021W CNN1P43618 361 aa4.48□□□□□ -1.69
RPN3YER021W CIT3P43635 486 aa4.48□□□□□ -1.69
RPN3YER021W CWC24P53769 259 aa4.48□□□□□ -1.69
RPN3YER021W TPP1Q03796 238 aa4.48□□□□□ -1.69
RPN3YER021W TIF35Q04067 274 aaKnown RBP4.48□□□□□ -1.69
RPN3YER021W PUS7Q08647 676 aaKnown RBP4.48□□□□□ -1.69
RPN3YER021W ULS1Q08562 1619 aa4.47□□□□□ -1.69
RPN3YER021W DBP5P20449 482 aaKnown RBP4.47□□□□□ -1.69
RPN3YER021W RNQ1P25367 405 aa4.47□□□□□ -1.69
RPN3YER021W LYP1P32487 611 aa4.47□□□□□ -1.69
RPN3YER021W YJL045WP47052 634 aa4.47□□□□□ -1.69
RPN3YER021W YVC1Q12324 675 aa4.47□□□□□ -1.69
RPN3YER021W SPP41P38904 1435 aa4.46□□□□□ -1.7
RPN3YER021W MSB1P21339 1137 aaKnown RBP4.46□□□□□ -1.7
RPN3YER021W KIP1P28742 1111 aa4.46□□□□□ -1.7
RPN3YER021W TYW3P53177 273 aa4.46□□□□□ -1.7
RPN3YER021W HRK1Q08732 759 aaKnown RBP4.46□□□□□ -1.7
RPN3YER021W VTH1P40438 1549 aa4.46□□□□□ -1.7
RPN3YER021W VTH2P40890 1549 aa4.46□□□□□ -1.7
RPN3YER021W MLS1P30952 554 aa4.45□□□□□ -1.7
RPN3YER021W RGD1P38339 666 aa4.45□□□□□ -1.7
RPN3YER021W GPB2P39717 880 aa4.45□□□□□ -1.7
RPN3YER021W MPH1P40562 993 aa4.45□□□□□ -1.7
RPN3YER021W OYE3P41816 400 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms