RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	HSP42	Q12329	375 aa		4.65	□□□□□ -1.67
NUG1	YER006W	URB1	P34241	1764 aa	Known RBP	4.64	□□□□□ -1.67
NUG1	YER006W	KRE5	P22023	1365 aa		4.64	□□□□□ -1.67
NUG1	YER006W	NUF2	P33895	451 aa		4.64	□□□□□ -1.67
NUG1	YER006W	NCL1	P38205	684 aa	Known RBP	4.64	□□□□□ -1.67
NUG1	YER006W	TPS3	P38426	1054 aa	Known RBP	4.64	□□□□□ -1.67
NUG1	YER006W	NMD3	P38861	518 aa	Known RBP	4.64	□□□□□ -1.67
NUG1	YER006W	IAH1	P41734	238 aa		4.64	□□□□□ -1.67
NUG1	YER006W	DSL1	P53847	754 aa		4.64	□□□□□ -1.67
NUG1	YER006W	VTC3	Q02725	835 aa		4.64	□□□□□ -1.67
NUG1	YER006W	PEX19	Q07418	342 aa		4.64	□□□□□ -1.67
NUG1	YER006W	RUD3	Q12234	484 aa	Known RBP	4.64	□□□□□ -1.67
NUG1	YER006W	VAN1	P23642	535 aa		4.63	□□□□□ -1.67
NUG1	YER006W	PEX5	P35056	612 aa		4.63	□□□□□ -1.67
NUG1	YER006W	RRP1	P35178	278 aa	Predicted RBP	4.63	□□□□□ -1.67
NUG1	YER006W	AMN1	P38285	549 aa	Predicted RBP	4.63	□□□□□ -1.67
NUG1	YER006W	HXT5	P38695	592 aa		4.63	□□□□□ -1.67
NUG1	YER006W	BEM4	P39011	633 aa		4.63	□□□□□ -1.67
NUG1	YER006W	DOT5	P40553	215 aa		4.63	□□□□□ -1.67
NUG1	YER006W	MPH1	P40562	993 aa		4.63	□□□□□ -1.67
NUG1	YER006W	ROM1	P53046	1155 aa		4.63	□□□□□ -1.67
NUG1	YER006W	HOS3	Q02959	697 aa	Known RBP	4.63	□□□□□ -1.67
NUG1	YER006W	PSR1	Q07800	427 aa		4.63	□□□□□ -1.67
NUG1	YER006W	SGT2	Q12118	346 aa	Known RBP	4.63	□□□□□ -1.67
NUG1	YER006W	NKP1	Q12493	238 aa		4.63	□□□□□ -1.67
NUG1	YER006W	SRB8	P25648	1427 aa		4.63	□□□□□ -1.67
NUG1	YER006W	OPI1	P21957	404 aa		4.62	□□□□□ -1.67
NUG1	YER006W	MSP1	P28737	362 aa		4.62	□□□□□ -1.67
NUG1	YER006W	PRK1	P40494	810 aa		4.62	□□□□□ -1.67
NUG1	YER006W	SEC26	P41810	973 aa	Known RBP	4.62	□□□□□ -1.67
NUG1	YER006W	LSB6	P42951	607 aa		4.62	□□□□□ -1.67
NUG1	YER006W	IES1	P43579	692 aa		4.62	□□□□□ -1.67
NUG1	YER006W	CUS1	Q02554	436 aa	Predicted RBP	4.62	□□□□□ -1.67
NUG1	YER006W	SPO19	Q03029	223 aa		4.62	□□□□□ -1.67
NUG1	YER006W	ORM2	Q06144	216 aa		4.62	□□□□□ -1.67
NUG1	YER006W	MCA1	Q08601	432 aa		4.62	□□□□□ -1.67
NUG1	YER006W	IKI3	Q06706	1349 aa	Known RBP	4.62	□□□□□ -1.67
NUG1	YER006W	YEF3	P16521	1044 aa	Known RBP	4.61	□□□□□ -1.67
NUG1	YER006W	RPA135	P22138	1203 aa	Known RBP	4.61	□□□□□ -1.67
NUG1	YER006W	PRP45	P28004	379 aa	Predicted RBP	4.61	□□□□□ -1.67
NUG1	YER006W	STE5	P32917	917 aa		4.61	□□□□□ -1.67
NUG1	YER006W	PRP40	P33203	583 aa	Known RBP	4.61	□□□□□ -1.67
NUG1	YER006W	RKM3	P38222	552 aa		4.61	□□□□□ -1.67
NUG1	YER006W	ALG14	P38242	237 aa		4.61	□□□□□ -1.67
NUG1	YER006W	APM2	P38700	605 aa		4.61	□□□□□ -1.67
NUG1	YER006W	ERP2	P39704	215 aa		4.61	□□□□□ -1.67
NUG1	YER006W	SWD1	P39706	426 aa		4.61	□□□□□ -1.67
NUG1	YER006W	NOC2	P39744	710 aa	Known RBP	4.61	□□□□□ -1.67
NUG1	YER006W	SET2	P46995	733 aa	Known RBP	4.61	□□□□□ -1.67
NUG1	YER006W	PRY1	P47032	299 aa		4.61	□□□□□ -1.67
NUG1	YER006W	KEL2	P50090	882 aa		4.61	□□□□□ -1.67
NUG1	YER006W	ERB1	Q04660	807 aa	Known RBP	4.61	□□□□□ -1.67
NUG1	YER006W	MRD1	Q06106	887 aa	Known RBP	4.61	□□□□□ -1.67
NUG1	YER006W	LSO1	Q3E827	93 aa		4.61	□□□□□ -1.67
NUG1	YER006W	RSF2	P46974	1380 aa		4.61	□□□□□ -1.67
NUG1	YER006W	PCT1	P13259	424 aa		4.61	□□□□□ -1.67
NUG1	YER006W	TGL4	P36165	910 aa		4.61	□□□□□ -1.67
NUG1	YER006W	PGM2	P37012	569 aa	Known RBP	4.61	□□□□□ -1.67
NUG1	YER006W	SAP1	P39955	897 aa	Known RBP	4.61	□□□□□ -1.67
NUG1	YER006W	GYP7	P48365	746 aa		4.61	□□□□□ -1.67
NUG1	YER006W	CWH41	P53008	833 aa		4.61	□□□□□ -1.67
NUG1	YER006W	IST1	P53843	298 aa	Predicted RBP	4.61	□□□□□ -1.67
NUG1	YER006W	MRS2	Q01926	470 aa		4.61	□□□□□ -1.67
NUG1	YER006W	APC5	Q08683	685 aa		4.61	□□□□□ -1.67
NUG1	YER006W	YOL087C	Q99247	1116 aa		4.61	□□□□□ -1.67
NUG1	YER006W	ROM2	P51862	1356 aa	Known RBP	4.6	□□□□□ -1.67
NUG1	YER006W	CDC31	P06704	161 aa	Known RBP	4.6	□□□□□ -1.67
NUG1	YER006W	FAR1	P21268	830 aa		4.6	□□□□□ -1.67
NUG1	YER006W	KDX1	P36005	433 aa		4.6	□□□□□ -1.67
NUG1	YER006W	TTI1	P36097	1038 aa		4.6	□□□□□ -1.67
NUG1	YER006W	RTT107	P38850	1070 aa		4.6	□□□□□ -1.67
NUG1	YER006W	YNR040W	P53736	256 aa		4.6	□□□□□ -1.67
NUG1	YER006W	ECM23	Q02710	187 aa		4.6	□□□□□ -1.67
NUG1	YER006W	YML119W	Q03208	357 aa		4.6	□□□□□ -1.67
NUG1	YER006W	VMS1	Q04311	632 aa	Known RBP	4.6	□□□□□ -1.67
NUG1	YER006W	RSC2	Q06488	889 aa		4.6	□□□□□ -1.67
NUG1	YER006W	TSR1	Q07381	788 aa	Known RBP	4.6	□□□□□ -1.67
NUG1	YER006W	PCL8	Q08966	492 aa		4.6	□□□□□ -1.67
NUG1	YER006W	SLX4	Q12098	748 aa		4.6	□□□□□ -1.67
NUG1	YER006W	SFI1	Q12369	946 aa		4.6	□□□□□ -1.67
NUG1	YER006W	TY4A-H	Q6Q5P6	413 aa		4.6	□□□□□ -1.67
NUG1	YER006W	TRS33	Q99394	268 aa		4.6	□□□□□ -1.67
NUG1	YER006W	DPH5	P32469	300 aa	Predicted RBP	4.59	□□□□□ -1.67
NUG1	YER006W	HIR2	P32480	875 aa		4.59	□□□□□ -1.67
NUG1	YER006W	SEC6	P32844	805 aa		4.59	□□□□□ -1.67
NUG1	YER006W	ARC19	P33204	171 aa	Known RBP	4.59	□□□□□ -1.67
NUG1	YER006W	YEL1	P34225	687 aa		4.59	□□□□□ -1.67
NUG1	YER006W	ATG14	P38270	344 aa		4.59	□□□□□ -1.67
NUG1	YER006W	VPS27	P40343	622 aa	Known RBP	4.59	□□□□□ -1.67
NUG1	YER006W	QDR2	P40474	542 aa		4.59	□□□□□ -1.67
NUG1	YER006W	OCA1	P50946	238 aa	Predicted RBP	4.59	□□□□□ -1.67
NUG1	YER006W	YMR111C	Q04461	462 aa	Predicted RBP	4.59	□□□□□ -1.67
NUG1	YER006W	JIP5	Q06214	492 aa	Predicted RBP	4.59	□□□□□ -1.67
NUG1	YER006W	RIX7	Q07844	837 aa	Known RBP	4.59	□□□□□ -1.67
NUG1	YER006W	AVO1	Q08236	1176 aa		4.59	□□□□□ -1.67
NUG1	YER006W	SLP1	Q12232	587 aa		4.59	□□□□□ -1.67
NUG1	YER006W	APC2	Q12440	853 aa		4.59	□□□□□ -1.67
NUG1	YER006W	CEX1	Q12453	761 aa		4.59	□□□□□ -1.67
NUG1	YER006W	POM152	P39685	1337 aa		4.59	□□□□□ -1.67
NUG1	YER006W	CDC37	P06101	506 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 78.2 ms