RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W MRPL33P20084 86 aa1.68□□□□□ -2.14
MSN5YDR335W VPS35P34110 944 aa1.68□□□□□ -2.14
MSN5YDR335W LDH1P38139 375 aa1.68□□□□□ -2.14
MSN5YDR335W CIC1P38779 376 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W FAA3P39002 694 aa1.68□□□□□ -2.14
MSN5YDR335W ALR2P43553 858 aa1.68□□□□□ -2.14
MSN5YDR335W HSV2P50079 448 aaPredicted RBP1.68□□□□□ -2.14
MSN5YDR335W ITC1P53125 1264 aa1.68□□□□□ -2.14
MSN5YDR335W YGR122WP53272 402 aa1.68□□□□□ -2.14
MSN5YDR335W YNR029CP53729 429 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W UTP14Q04500 899 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W EMG1Q06287 252 aaKnown RBP1.68□□□□□ -2.14
MSN5YDR335W ATG13Q06628 738 aa1.68□□□□□ -2.14
MSN5YDR335W NTG2Q08214 380 aa1.68□□□□□ -2.14
MSN5YDR335W PHO4P07270 312 aaKnown RBP1.67□□□□□ -2.14
MSN5YDR335W DPB3P27344 201 aa1.67□□□□□ -2.14
MSN5YDR335W ABD1P32783 436 aaPredicted RBP1.67□□□□□ -2.14
MSN5YDR335W ATG14P38270 344 aa1.67□□□□□ -2.14
MSN5YDR335W RSM26P47141 266 aa1.67□□□□□ -2.14
MSN5YDR335W PEX14P53112 341 aa1.67□□□□□ -2.14
MSN5YDR335W PEX8P53248 589 aa1.67□□□□□ -2.14
MSN5YDR335W YLR225CQ05948 407 aaKnown RBP1.67□□□□□ -2.14
MSN5YDR335W YDL124WQ07551 312 aaKnown RBP1.67□□□□□ -2.14
MSN5YDR335W RAD2P07276 1031 aa1.67□□□□□ -2.14
MSN5YDR335W HSP60P19882 572 aaKnown RBP1.67□□□□□ -2.14
MSN5YDR335W TFA2P36145 328 aa1.67□□□□□ -2.14
MSN5YDR335W MAL31P38156 614 aa1.67□□□□□ -2.14
MSN5YDR335W KRI1P42846 591 aaKnown RBP1.67□□□□□ -2.14
MSN5YDR335W YMR187CQ03236 431 aa1.67□□□□□ -2.14
MSN5YDR335W EDE1P34216 1381 aa1.67□□□□□ -2.14
MSN5YDR335W TOM70P07213 617 aaKnown RBP1.67□□□□□ -2.14
MSN5YDR335W CYC8P14922 966 aa1.67□□□□□ -2.14
MSN5YDR335W VMA4P22203 233 aaKnown RBP1.67□□□□□ -2.14
MSN5YDR335W VPS24P36095 224 aaKnown RBP1.67□□□□□ -2.14
MSN5YDR335W YBR284WP38150 797 aa1.67□□□□□ -2.14
MSN5YDR335W NDE1P40215 560 aa1.67□□□□□ -2.14
MSN5YDR335W BUD6P41697 788 aa1.67□□□□□ -2.14
MSN5YDR335W SOK2P53438 785 aaPredicted RBP1.67□□□□□ -2.14
MSN5YDR335W YOR378WQ08902 515 aa1.67□□□□□ -2.14
MSN5YDR335W ENT1Q12518 454 aa1.67□□□□□ -2.14
MSN5YDR335W TIF6Q12522 245 aaKnown RBP1.67□□□□□ -2.14
MSN5YDR335W DIT1P21623 536 aa1.66□□□□□ -2.14
MSN5YDR335W COQ2P32378 372 aa1.66□□□□□ -2.14
MSN5YDR335W KAP122P32767 1081 aa1.66□□□□□ -2.14
MSN5YDR335W SQT1P35184 431 aa1.66□□□□□ -2.14
MSN5YDR335W ISW1P38144 1129 aa1.66□□□□□ -2.14
MSN5YDR335W NMD3P38861 518 aaKnown RBP1.66□□□□□ -2.14
MSN5YDR335W SAH1P39954 449 aaKnown RBP1.66□□□□□ -2.14
MSN5YDR335W DOT6P40059 670 aaKnown RBP1.66□□□□□ -2.14
MSN5YDR335W PRY1P47032 299 aa1.66□□□□□ -2.14
MSN5YDR335W LYS5P50113 272 aa1.66□□□□□ -2.14
MSN5YDR335W INP54Q08227 384 aaKnown RBP1.66□□□□□ -2.14
MSN5YDR335W CIT1P00890 479 aa1.66□□□□□ -2.14
MSN5YDR335W RPL8AP17076 256 aaKnown RBP1.66□□□□□ -2.14
MSN5YDR335W RET1P22276 1149 aaKnown RBP1.66□□□□□ -2.14
MSN5YDR335W CCC2P38995 1004 aa1.66□□□□□ -2.14
MSN5YDR335W PEA2P40091 420 aa1.66□□□□□ -2.14
MSN5YDR335W NEO1P40527 1151 aa1.66□□□□□ -2.14
MSN5YDR335W YGL081WP53156 320 aa1.66□□□□□ -2.14
MSN5YDR335W NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
MSN5YDR335W RAD18P10862 487 aa1.65□□□□□ -2.14
MSN5YDR335W PWP2P25635 923 aaKnown RBP1.65□□□□□ -2.14
MSN5YDR335W CDC60P26637 1090 aaKnown RBP1.65□□□□□ -2.14
MSN5YDR335W MCM7P38132 845 aa1.65□□□□□ -2.14
MSN5YDR335W ACO2P39533 789 aa1.65□□□□□ -2.14
MSN5YDR335W CHZ1P40019 153 aaPredicted RBP1.65□□□□□ -2.14
MSN5YDR335W PEX13P80667 386 aa1.65□□□□□ -2.14
MSN5YDR335W ESC2Q06340 456 aa1.65□□□□□ -2.14
MSN5YDR335W TDA6Q06466 467 aa1.65□□□□□ -2.14
MSN5YDR335W MCA1Q08601 432 aa1.65□□□□□ -2.14
MSN5YDR335W NKP1Q12493 238 aa1.65□□□□□ -2.14
MSN5YDR335W SPT7P35177 1332 aa1.65□□□□□ -2.14
MSN5YDR335W BCK1Q01389 1478 aa1.65□□□□□ -2.14
MSN5YDR335W CAN1P04817 590 aa1.65□□□□□ -2.15
MSN5YDR335W HEM13P11353 328 aaKnown RBP1.65□□□□□ -2.15
MSN5YDR335W MSM1P22438 575 aa1.65□□□□□ -2.15
MSN5YDR335W UBS1P38290 277 aa1.65□□□□□ -2.15
MSN5YDR335W RIM4P38741 713 aa1.65□□□□□ -2.15
MSN5YDR335W XKS1P42826 600 aa1.65□□□□□ -2.15
MSN5YDR335W THI73Q07904 523 aa1.65□□□□□ -2.15
MSN5YDR335W VMR1P38735 1592 aa1.65□□□□□ -2.15
MSN5YDR335W TY4B-PA0A0B7P3V8 1104 aa1.65□□□□□ -2.15
MSN5YDR335W FOB1O13329 566 aa1.65□□□□□ -2.15
MSN5YDR335W CYB2P00175 591 aa1.65□□□□□ -2.15
MSN5YDR335W PFK1P16861 987 aaKnown RBP1.65□□□□□ -2.15
MSN5YDR335W MCM5P29496 775 aaKnown RBP1.65□□□□□ -2.15
MSN5YDR335W SSH4P32343 579 aa1.65□□□□□ -2.15
MSN5YDR335W TOA1P32773 286 aa1.65□□□□□ -2.15
MSN5YDR335W MFT1P33441 392 aaKnown RBP1.65□□□□□ -2.15
MSN5YDR335W PEX6P33760 1030 aa1.65□□□□□ -2.15
MSN5YDR335W MAC1P35192 417 aa1.65□□□□□ -2.15
MSN5YDR335W MNR2P35724 969 aa1.65□□□□□ -2.15
MSN5YDR335W BAP2P38084 609 aa1.65□□□□□ -2.15
MSN5YDR335W AKR1P39010 764 aa1.65□□□□□ -2.15
MSN5YDR335W SPF1P39986 1215 aaKnown RBP1.65□□□□□ -2.15
MSN5YDR335W HXT8P40886 569 aa1.65□□□□□ -2.15
MSN5YDR335W GPP1P41277 250 aaKnown RBP1.65□□□□□ -2.15
MSN5YDR335W IML2P47031 731 aa1.65□□□□□ -2.15
MSN5YDR335W UFD2P54860 961 aa1.65□□□□□ -2.15
MSN5YDR335W TY4A-HQ6Q5P6 413 aa1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 81.1 ms