RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	TY1B-GR1	Q12141	1755 aa		4.7	□□□□□ -1.66
SSB1	YDL229W	TY1B-BL	Q12490	1755 aa		4.7	□□□□□ -1.66
SSB1	YDL229W	FOB1	O13329	566 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	SUI3	P09064	285 aa	Known RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	SSB1	P11484	613 aa	Known RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	YBL028C	P38202	106 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	RFC5	P38251	354 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	SET1	P38827	1080 aa	Known RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	PTP3	P40048	928 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	SSB2	P40150	613 aa	Known RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	SYG1	P40528	902 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	MNT3	P40549	630 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	PHB1	P40961	287 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	MET12	P46151	657 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	STU2	P46675	888 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	UBP15	P50101	1230 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	ASI1	P54074	624 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	FDC1	Q03034	503 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	GYL1	Q04322	720 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	TSR2	Q06672	205 aa	Known RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	ACF2	Q12168	779 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	ENT1	Q12518	454 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	IRC20	Q06554	1556 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	SNQ2	P32568	1501 aa	Known RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	KGD2	P19262	463 aa	Predicted RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	CDC60	P26637	1090 aa	Known RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	RPN2	P32565	945 aa	Known RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	SLA1	P32790	1244 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	XRS2	P33301	854 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	MRP8	P35719	219 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	YKL222C	P35995	705 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	HEL1	P36113	551 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	ECM4	P36156	370 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	APS3	P47064	194 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	HOL1	P53389	586 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	ALF1	P53904	254 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	SYF1	Q04048	859 aa	Predicted RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	DON1	Q05610	365 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	NOP12	Q08208	459 aa	Known RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	ABP140	Q08641	628 aa	Known RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	YPL191C	Q08930	360 aa		4.69	□□□□□ -1.66
SSB1	YDL229W	HTZ1	Q12692	134 aa	Known RBP	4.69	□□□□□ -1.66
SSB1	YDL229W	THS1	P04801	734 aa	Known RBP	4.68	□□□□□ -1.66
SSB1	YDL229W	RPB2	P08518	1224 aa	Known RBP	4.68	□□□□□ -1.66
SSB1	YDL229W	PET122	P10355	254 aa		4.68	□□□□□ -1.66
SSB1	YDL229W	SPE2	P21182	396 aa		4.68	□□□□□ -1.66
SSB1	YDL229W	RSC6	P25632	483 aa		4.68	□□□□□ -1.66
SSB1	YDL229W	DUR3	P33413	735 aa		4.68	□□□□□ -1.66
SSB1	YDL229W	STO1	P34160	861 aa	Known RBP	4.68	□□□□□ -1.66
SSB1	YDL229W	RTG3	P38165	486 aa		4.68	□□□□□ -1.66
SSB1	YDL229W	YHR020W	P38708	688 aa	Known RBP	4.68	□□□□□ -1.66
SSB1	YDL229W	YFL066C	P43538	392 aa		4.68	□□□□□ -1.66
SSB1	YDL229W	NUP42	P49686	430 aa	Known RBP	4.68	□□□□□ -1.66
SSB1	YDL229W	LSG1	P53145	640 aa	Known RBP	4.68	□□□□□ -1.66
SSB1	YDL229W	UTP22	P53254	1237 aa	Predicted RBP	4.68	□□□□□ -1.66
SSB1	YDL229W	SSL2	Q00578	843 aa		4.68	□□□□□ -1.66
SSB1	YDL229W	DML1	Q03652	475 aa		4.68	□□□□□ -1.66
SSB1	YDL229W	RSA3	Q05942	220 aa	Known RBP	4.68	□□□□□ -1.66
SSB1	YDL229W	MAG2	Q06436	670 aa	Known RBP	4.68	□□□□□ -1.66
SSB1	YDL229W	MCP2	Q06567	569 aa		4.68	□□□□□ -1.66
SSB1	YDL229W	YDL124W	Q07551	312 aa	Known RBP	4.68	□□□□□ -1.66
SSB1	YDL229W	CMS1	Q07897	291 aa	Known RBP	4.68	□□□□□ -1.66
SSB1	YDL229W	OSH2	Q12451	1283 aa		4.68	□□□□□ -1.66
SSB1	YDL229W	NTE1	Q04958	1679 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	PMA2	P19657	947 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	PGS1	P25578	521 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	DAL80	P26343	269 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	MGM1	P32266	881 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	SSE1	P32589	693 aa	Known RBP	4.67	□□□□□ -1.66
SSB1	YDL229W	DOM34	P33309	386 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	BAP2	P38084	609 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	YBR242W	P38331	238 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	RRF1	P38771	230 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	NUP60	P39705	539 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	BDH2	P39713	417 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	DOT6	P40059	670 aa	Known RBP	4.67	□□□□□ -1.66
SSB1	YDL229W	URB2	P47108	1174 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	SGM1	P47166	707 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	UBP2	Q01476	1272 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	MUB1	Q03162	620 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	CWC21	Q03375	135 aa	Known RBP	4.67	□□□□□ -1.66
SSB1	YDL229W	MGR3	Q04472	501 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	LCB5	Q06147	687 aa	Known RBP	4.67	□□□□□ -1.66
SSB1	YDL229W	RSC3	Q06639	885 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	RTT10	Q08924	1013 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	MCD1	Q12158	566 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	BUG1	Q12191	341 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	RPS3	P05750	240 aa	Known RBP	4.67	□□□□□ -1.66
SSB1	YDL229W	HCA4	P20448	770 aa	Known RBP	4.67	□□□□□ -1.66
SSB1	YDL229W	KRE6	P32486	720 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	SLD2	P34252	453 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	RSM22	P36056	628 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	PSY4	P38193	441 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	STM1	P39015	273 aa	Known RBP	4.67	□□□□□ -1.66
SSB1	YDL229W	YHB1	P39676	399 aa	Known RBP	4.67	□□□□□ -1.66
SSB1	YDL229W	YJL070C	P40361	888 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	PRP31	P49704	494 aa	Predicted RBP	4.67	□□□□□ -1.66
SSB1	YDL229W	YGL082W	P53155	381 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	YGR067C	P53243	804 aa		4.67	□□□□□ -1.66
SSB1	YDL229W	CUS1	Q02554	436 aa	Predicted RBP	4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 33 ms