RNA–Protein interactions for RNA: YBR291C

CTP1, Transcript of Mitochondrial inner membrane citrate transporter, yeast

Gene CTP1, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTP1	YBR291C	GPT2	P36148	743 aa		4.93	□□□□□ -1.62
CTP1	YBR291C	MCM7	P38132	845 aa		4.93	□□□□□ -1.62
CTP1	YBR291C	YHR020W	P38708	688 aa	Known RBP	4.93	□□□□□ -1.62
CTP1	YBR291C	YGL176C	P46945	554 aa		4.93	□□□□□ -1.62
CTP1	YBR291C	ALT1	P52893	592 aa		4.93	□□□□□ -1.62
CTP1	YBR291C	ARI1	P53111	347 aa	Known RBP	4.93	□□□□□ -1.62
CTP1	YBR291C	YLR257W	Q06146	321 aa	Known RBP	4.93	□□□□□ -1.62
CTP1	YBR291C	FMP25	Q08023	583 aa		4.93	□□□□□ -1.62
CTP1	YBR291C	YPL066W	Q12194	479 aa		4.93	□□□□□ -1.62
CTP1	YBR291C	PRP9	P19736	530 aa	Known RBP	4.92	□□□□□ -1.62
CTP1	YBR291C	NFS1	P25374	497 aa		4.92	□□□□□ -1.62
CTP1	YBR291C	RPL8B	P29453	256 aa	Known RBP	4.92	□□□□□ -1.62
CTP1	YBR291C	SCT1	P32784	759 aa		4.92	□□□□□ -1.62
CTP1	YBR291C	MAC1	P35192	417 aa		4.92	□□□□□ -1.62
CTP1	YBR291C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
CTP1	YBR291C	RPN3	P40016	523 aa	Known RBP	4.92	□□□□□ -1.62
CTP1	YBR291C	ERP6	P53198	216 aa		4.92	□□□□□ -1.62
CTP1	YBR291C	DOS2	P54858	310 aa		4.92	□□□□□ -1.62
CTP1	YBR291C	GAS5	Q08193	484 aa		4.92	□□□□□ -1.62
CTP1	YBR291C	PPM2	Q08282	695 aa		4.92	□□□□□ -1.62
CTP1	YBR291C	OSH2	Q12451	1283 aa		4.92	□□□□□ -1.62
CTP1	YBR291C	CIT2	P08679	460 aa		4.91	□□□□□ -1.62
CTP1	YBR291C	KIP1	P28742	1111 aa		4.91	□□□□□ -1.62
CTP1	YBR291C	RRP14	P36080	434 aa	Known RBP	4.91	□□□□□ -1.62
CTP1	YBR291C	TAT1	P38085	619 aa		4.91	□□□□□ -1.62
CTP1	YBR291C	CHZ1	P40019	153 aa	Predicted RBP	4.91	□□□□□ -1.62
CTP1	YBR291C	SIP5	P40210	489 aa	Known RBP	4.91	□□□□□ -1.62
CTP1	YBR291C	PFD1	P46988	109 aa		4.91	□□□□□ -1.62
CTP1	YBR291C	UTP8	P53276	713 aa	Known RBP	4.91	□□□□□ -1.62
CTP1	YBR291C	GIC2	Q06648	383 aa		4.91	□□□□□ -1.62
CTP1	YBR291C	FLC1	Q08967	793 aa		4.91	□□□□□ -1.62
CTP1	YBR291C	YDR215C	Q12240	137 aa		4.91	□□□□□ -1.62
CTP1	YBR291C	SPO21	Q12411	609 aa		4.91	□□□□□ -1.62
CTP1	YBR291C	GLT1	Q12680	2145 aa	Known RBP	4.9	□□□□□ -1.62
CTP1	YBR291C	HSP60	P19882	572 aa	Known RBP	4.9	□□□□□ -1.63
CTP1	YBR291C	GGA2	P38817	585 aa	Known RBP	4.9	□□□□□ -1.63
CTP1	YBR291C	RNH70	P53331	553 aa		4.9	□□□□□ -1.63
CTP1	YBR291C	PNT1	P38969	423 aa		4.89	□□□□□ -1.63
CTP1	YBR291C	PRY1	P47032	299 aa		4.89	□□□□□ -1.63
CTP1	YBR291C	YJL045W	P47052	634 aa		4.89	□□□□□ -1.63
CTP1	YBR291C	TPP1	Q03796	238 aa		4.89	□□□□□ -1.63
CTP1	YBR291C	EAF1	Q06337	982 aa		4.89	□□□□□ -1.63
CTP1	YBR291C	PUS7	Q08647	676 aa	Known RBP	4.89	□□□□□ -1.63
CTP1	YBR291C	CIT1	P00890	479 aa		4.88	□□□□□ -1.63
CTP1	YBR291C	RPS4A	P0CX35	261 aa	Known RBP	4.88	□□□□□ -1.63
CTP1	YBR291C	RPS4B	P0CX36	261 aa	Known RBP	4.88	□□□□□ -1.63
CTP1	YBR291C	YER152C	P10356	443 aa		4.88	□□□□□ -1.63
CTP1	YBR291C	GAL11	P19659	1081 aa		4.88	□□□□□ -1.63
CTP1	YBR291C	YCK2	P23292	546 aa	Known RBP	4.88	□□□□□ -1.63
CTP1	YBR291C	RSP5	P39940	809 aa	Known RBP	4.88	□□□□□ -1.63
CTP1	YBR291C	YGR125W	P53273	1036 aa		4.88	□□□□□ -1.63
CTP1	YBR291C	TPO2	P53283	614 aa		4.88	□□□□□ -1.63
CTP1	YBR291C	SPP382	Q06411	708 aa	Predicted RBP	4.88	□□□□□ -1.63
CTP1	YBR291C	RPL11A	P0C0W9	174 aa	Known RBP	4.87	□□□□□ -1.63
CTP1	YBR291C	YSC84	P32793	468 aa		4.87	□□□□□ -1.63
CTP1	YBR291C	PPG1	P32838	368 aa		4.87	□□□□□ -1.63
CTP1	YBR291C	MBP1	P39678	833 aa		4.87	□□□□□ -1.63
CTP1	YBR291C	NUP82	P40368	713 aa		4.87	□□□□□ -1.63
CTP1	YBR291C	MMM1	P41800	426 aa		4.87	□□□□□ -1.63
CTP1	YBR291C	HOS3	Q02959	697 aa	Known RBP	4.87	□□□□□ -1.63
CTP1	YBR291C	TAF8	Q03750	510 aa		4.87	□□□□□ -1.63
CTP1	YBR291C	YOR059C	Q08448	450 aa	Known RBP	4.87	□□□□□ -1.63
CTP1	YBR291C	RPL11B	Q3E757	174 aa	Predicted RBP	4.87	□□□□□ -1.63
CTP1	YBR291C	CAN1	P04817	590 aa		4.86	□□□□□ -1.63
CTP1	YBR291C	ARE1	P25628	610 aa		4.86	□□□□□ -1.63
CTP1	YBR291C	PGM1	P33401	570 aa	Known RBP	4.86	□□□□□ -1.63
CTP1	YBR291C	BAP2	P38084	609 aa		4.86	□□□□□ -1.63
CTP1	YBR291C	BRN1	P38170	754 aa		4.86	□□□□□ -1.63
CTP1	YBR291C	SAF1	P38352	637 aa		4.86	□□□□□ -1.63
CTP1	YBR291C	GPB2	P39717	880 aa		4.86	□□□□□ -1.63
CTP1	YBR291C	GEM1	P39722	662 aa		4.86	□□□□□ -1.63
CTP1	YBR291C	HUL4	P40985	892 aa		4.86	□□□□□ -1.63
CTP1	YBR291C	ALR2	P43553	858 aa		4.86	□□□□□ -1.63
CTP1	YBR291C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
CTP1	YBR291C	TNA1	P53322	534 aa		4.86	□□□□□ -1.63
CTP1	YBR291C	ALG12	P53730	551 aa		4.86	□□□□□ -1.63
CTP1	YBR291C	YLR125W	Q12138	136 aa		4.86	□□□□□ -1.63
CTP1	YBR291C	COQ4	O13525	335 aa		4.85	□□□□□ -1.63
CTP1	YBR291C	SRO9	P25567	434 aa	Known RBP	4.85	□□□□□ -1.63
CTP1	YBR291C	SPC42	P36094	363 aa		4.85	□□□□□ -1.63
CTP1	YBR291C	AKR1	P39010	764 aa		4.85	□□□□□ -1.63
CTP1	YBR291C	SLN1	P39928	1220 aa	Predicted RBP	4.85	□□□□□ -1.63
CTP1	YBR291C	SIT1	P39980	628 aa		4.85	□□□□□ -1.63
CTP1	YBR291C	CIT3	P43635	486 aa		4.85	□□□□□ -1.63
CTP1	YBR291C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
CTP1	YBR291C	ACM1	Q08981	209 aa		4.85	□□□□□ -1.63
CTP1	YBR291C	PHO8	P11491	566 aa		4.84	□□□□□ -1.63
CTP1	YBR291C	SNF5	P18480	905 aa		4.84	□□□□□ -1.63
CTP1	YBR291C	DBP2	P24783	546 aa	Known RBP	4.84	□□□□□ -1.63
CTP1	YBR291C	CDC11	P32458	415 aa		4.84	□□□□□ -1.63
CTP1	YBR291C	TIM23	P32897	222 aa		4.84	□□□□□ -1.63
CTP1	YBR291C	SLA2	P33338	968 aa		4.84	□□□□□ -1.63
CTP1	YBR291C	PIK1	P39104	1066 aa		4.84	□□□□□ -1.63
CTP1	YBR291C	MXR1	P40029	184 aa		4.84	□□□□□ -1.63
CTP1	YBR291C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
CTP1	YBR291C	EAR1	Q03212	550 aa		4.84	□□□□□ -1.63
CTP1	YBR291C	UBX5	Q06682	500 aa		4.84	□□□□□ -1.63
CTP1	YBR291C	YDL124W	Q07551	312 aa	Known RBP	4.84	□□□□□ -1.63
CTP1	YBR291C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
CTP1	YBR291C	YVC1	Q12324	675 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms