RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C OCA5P38738 679 aa4.55□□□□□ -1.68
SHG1YBR258C SKN7P38889 622 aa4.55□□□□□ -1.68
SHG1YBR258C YAR028WP39548 234 aa4.55□□□□□ -1.68
SHG1YBR258C YGR045CP53229 120 aa4.55□□□□□ -1.68
SHG1YBR258C ROD1Q02805 837 aa4.55□□□□□ -1.68
SHG1YBR258C YMR074CQ04773 145 aa4.55□□□□□ -1.68
SHG1YBR258C GAS5Q08193 484 aa4.55□□□□□ -1.68
SHG1YBR258C YPR053CQ6Q5F3 151 aa4.55□□□□□ -1.68
SHG1YBR258C YSP2Q06681 1438 aa4.55□□□□□ -1.68
SHG1YBR258C TRM3Q07527 1436 aa4.55□□□□□ -1.68
SHG1YBR258C RSC6P25632 483 aa4.54□□□□□ -1.68
SHG1YBR258C RAD27P26793 382 aa4.54□□□□□ -1.68
SHG1YBR258C LYP1P32487 611 aa4.54□□□□□ -1.68
SHG1YBR258C RER2P35196 286 aa4.54□□□□□ -1.68
SHG1YBR258C VAC8P39968 578 aa4.54□□□□□ -1.68
SHG1YBR258C ICP55P40051 511 aa4.54□□□□□ -1.68
SHG1YBR258C SPO74P45819 413 aa4.54□□□□□ -1.68
SHG1YBR258C GDE1Q02979 1223 aa4.54□□□□□ -1.68
SHG1YBR258C DOT1Q04089 582 aaKnown RBP4.54□□□□□ -1.68
SHG1YBR258C SNT2P53127 1403 aa4.54□□□□□ -1.68
SHG1YBR258C TRP2P00899 507 aaKnown RBP4.53□□□□□ -1.68
SHG1YBR258C DBP5P20449 482 aaKnown RBP4.53□□□□□ -1.68
SHG1YBR258C YJL049WP47048 450 aa4.53□□□□□ -1.68
SHG1YBR258C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
SHG1YBR258C SYP1P25623 870 aaKnown RBP4.52□□□□□ -1.69
SHG1YBR258C SMY2P32909 740 aaKnown RBP4.52□□□□□ -1.69
SHG1YBR258C NNK1P36003 928 aa4.52□□□□□ -1.69
SHG1YBR258C RGD1P38339 666 aa4.52□□□□□ -1.69
SHG1YBR258C HSE1P38753 452 aa4.52□□□□□ -1.69
SHG1YBR258C TAT2P38967 592 aa4.52□□□□□ -1.69
SHG1YBR258C SLN1P39928 1220 aaPredicted RBP4.52□□□□□ -1.69
SHG1YBR258C MSH4P40965 878 aaPredicted RBP4.52□□□□□ -1.69
SHG1YBR258C CNN1P43618 361 aa4.52□□□□□ -1.69
SHG1YBR258C PRY1P47032 299 aa4.52□□□□□ -1.69
SHG1YBR258C VPS53P47061 822 aa4.52□□□□□ -1.69
SHG1YBR258C NNF1P47149 201 aa4.52□□□□□ -1.69
SHG1YBR258C ALT1P52893 592 aa4.52□□□□□ -1.69
SHG1YBR258C YMR187CQ03236 431 aa4.52□□□□□ -1.69
SHG1YBR258C RSA3Q05942 220 aaKnown RBP4.52□□□□□ -1.69
SHG1YBR258C AVO1Q08236 1176 aa4.52□□□□□ -1.69
SHG1YBR258C ALG6Q12001 544 aaKnown RBP4.52□□□□□ -1.69
SHG1YBR258C BNR1P40450 1375 aa4.52□□□□□ -1.69
SHG1YBR258C BUD3P25558 1636 aa4.51□□□□□ -1.69
SHG1YBR258C AGP1P25376 633 aa4.51□□□□□ -1.69
SHG1YBR258C YAP3P38749 330 aa4.51□□□□□ -1.69
SHG1YBR258C MPH1P40562 993 aa4.51□□□□□ -1.69
SHG1YBR258C CWC24P53769 259 aa4.51□□□□□ -1.69
SHG1YBR258C ELA1P53861 379 aaPredicted RBP4.51□□□□□ -1.69
SHG1YBR258C RAT1Q02792 1006 aaKnown RBP4.51□□□□□ -1.69
SHG1YBR258C TIF35Q04067 274 aaKnown RBP4.51□□□□□ -1.69
SHG1YBR258C OPI10Q08202 246 aa4.51□□□□□ -1.69
SHG1YBR258C LAP2Q10740 671 aa4.51□□□□□ -1.69
SHG1YBR258C TSC11P40061 1430 aa4.51□□□□□ -1.69
SHG1YBR258C VTH1P40438 1549 aa4.51□□□□□ -1.69
SHG1YBR258C VTH2P40890 1549 aa4.51□□□□□ -1.69
SHG1YBR258C GPT2P36148 743 aa4.5□□□□□ -1.69
SHG1YBR258C ALG3P38179 458 aa4.5□□□□□ -1.69
SHG1YBR258C ATG14P38270 344 aa4.5□□□□□ -1.69
SHG1YBR258C QNS1P38795 714 aaKnown RBP4.5□□□□□ -1.69
SHG1YBR258C SPF1P39986 1215 aaKnown RBP4.5□□□□□ -1.69
SHG1YBR258C KRI1P42846 591 aaKnown RBP4.5□□□□□ -1.69
SHG1YBR258C HNT2P49775 206 aa4.5□□□□□ -1.69
SHG1YBR258C TYW3P53177 273 aa4.5□□□□□ -1.69
SHG1YBR258C RKM4Q12504 494 aa4.5□□□□□ -1.69
SHG1YBR258C DED1P06634 604 aaKnown RBP4.49□□□□□ -1.69
SHG1YBR258C SBA1P28707 216 aaKnown RBP4.49□□□□□ -1.69
SHG1YBR258C SEA4P38164 1038 aa4.49□□□□□ -1.69
SHG1YBR258C SHE9Q04172 456 aa4.49□□□□□ -1.69
SHG1YBR258C SPO20Q04359 397 aa4.49□□□□□ -1.69
SHG1YBR258C YLR257WQ06146 321 aaKnown RBP4.49□□□□□ -1.69
SHG1YBR258C HRK1Q08732 759 aaKnown RBP4.49□□□□□ -1.69
SHG1YBR258C YPL260WQ08977 551 aa4.49□□□□□ -1.69
SHG1YBR258C FAL1Q12099 399 aaKnown RBP4.49□□□□□ -1.69
SHG1YBR258C PUS1Q12211 544 aaKnown RBP4.49□□□□□ -1.69
SHG1YBR258C IQG1Q12280 1495 aa4.49□□□□□ -1.69
SHG1YBR258C RET1P22276 1149 aaKnown RBP4.48□□□□□ -1.69
SHG1YBR258C YKL069WP36088 180 aa4.48□□□□□ -1.69
SHG1YBR258C TAT1P38085 619 aa4.48□□□□□ -1.69
SHG1YBR258C RPN3P40016 523 aaKnown RBP4.48□□□□□ -1.69
SHG1YBR258C AOS1Q06624 347 aa4.48□□□□□ -1.69
SHG1YBR258C GIC2Q06648 383 aa4.48□□□□□ -1.69
SHG1YBR258C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
SHG1YBR258C GNT1Q12096 491 aa4.48□□□□□ -1.69
SHG1YBR258C PTC5Q12511 572 aa4.48□□□□□ -1.69
SHG1YBR258C YTA7P40340 1379 aa4.48□□□□□ -1.69
SHG1YBR258C BAS1P22035 811 aa4.47□□□□□ -1.69
SHG1YBR258C NFS1P25374 497 aa4.47□□□□□ -1.69
SHG1YBR258C SAF1P38352 637 aa4.47□□□□□ -1.69
SHG1YBR258C CCT8P47079 568 aaKnown RBP4.47□□□□□ -1.69
SHG1YBR258C YPL034WQ03083 165 aa4.47□□□□□ -1.69
SHG1YBR258C PUS7Q08647 676 aaKnown RBP4.47□□□□□ -1.69
SHG1YBR258C WRS1Q12109 432 aaKnown RBP4.47□□□□□ -1.69
SHG1YBR258C YPL066WQ12194 479 aa4.47□□□□□ -1.69
SHG1YBR258C RPS4AP0CX35 261 aaKnown RBP4.46□□□□□ -1.7
SHG1YBR258C RPS4BP0CX36 261 aaKnown RBP4.46□□□□□ -1.7
SHG1YBR258C INO1P11986 533 aa4.46□□□□□ -1.7
SHG1YBR258C MRP8P35719 219 aa4.46□□□□□ -1.7
SHG1YBR258C YNR063WP53749 607 aa4.46□□□□□ -1.7
SHG1YBR258C ESC2Q06340 456 aa4.46□□□□□ -1.7
SHG1YBR258C TDA5Q06417 326 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms