RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C RGD1P38339 666 aa3.77□□□□□ -1.81
SPC72YAL047C TMA46Q12000 345 aaKnown RBP3.77□□□□□ -1.81
SPC72YAL047C SPS1P08458 490 aa3.76□□□□□ -1.81
SPC72YAL047C HXT13P39924 564 aa3.76□□□□□ -1.81
SPC72YAL047C NIT1P40447 199 aa3.76□□□□□ -1.81
SPC72YAL047C GNP1P48813 663 aa3.76□□□□□ -1.81
SPC72YAL047C HXT17P53631 564 aa3.76□□□□□ -1.81
SPC72YAL047C HXT15P54854 567 aa3.76□□□□□ -1.81
SPC72YAL047C RSC58Q07979 502 aa3.76□□□□□ -1.81
SPC72YAL047C DBP5P20449 482 aaKnown RBP3.75□□□□□ -1.81
SPC72YAL047C RNQ1P25367 405 aa3.75□□□□□ -1.81
SPC72YAL047C MLS1P30952 554 aa3.75□□□□□ -1.81
SPC72YAL047C ETP1P38748 585 aaKnown RBP3.75□□□□□ -1.81
SPC72YAL047C RPN3P40016 523 aaKnown RBP3.75□□□□□ -1.81
SPC72YAL047C HNT2P49775 206 aa3.75□□□□□ -1.81
SPC72YAL047C YOR352WQ08816 343 aa3.75□□□□□ -1.81
SPC72YAL047C NAP1P25293 417 aaKnown RBP3.74□□□□□ -1.81
SPC72YAL047C RER2P35196 286 aa3.74□□□□□ -1.81
SPC72YAL047C PIK1P39104 1066 aa3.74□□□□□ -1.81
SPC72YAL047C RCL1Q08096 367 aaPredicted RBP3.74□□□□□ -1.81
SPC72YAL047C MNR2P35724 969 aa3.73□□□□□ -1.81
SPC72YAL047C ENV11P53246 860 aa3.73□□□□□ -1.81
SPC72YAL047C SNO2P53823 222 aa3.73□□□□□ -1.81
SPC72YAL047C MRPL22P53881 309 aa3.73□□□□□ -1.81
SPC72YAL047C YER152CP10356 443 aa3.73□□□□□ -1.81
SPC72YAL047C CDC34P14682 295 aa3.73□□□□□ -1.81
SPC72YAL047C CLN2P20438 545 aa3.73□□□□□ -1.81
SPC72YAL047C TIF35Q04067 274 aaKnown RBP3.73□□□□□ -1.81
SPC72YAL047C TRP2P00899 507 aaKnown RBP3.72□□□□□ -1.81
SPC72YAL047C SNF5P18480 905 aa3.72□□□□□ -1.81
SPC72YAL047C LYP1P32487 611 aa3.72□□□□□ -1.81
SPC72YAL047C BAP2P38084 609 aa3.72□□□□□ -1.81
SPC72YAL047C UBP5P39944 805 aa3.72□□□□□ -1.81
SPC72YAL047C MAD1P40957 749 aa3.72□□□□□ -1.81
SPC72YAL047C SEC26P41810 973 aaKnown RBP3.72□□□□□ -1.81
SPC72YAL047C SPO20Q04359 397 aa3.72□□□□□ -1.81
SPC72YAL047C GNT1Q12096 491 aa3.72□□□□□ -1.81
SPC72YAL047C YDL177CQ12257 170 aa3.72□□□□□ -1.81
SPC72YAL047C MPH1P40562 993 aa3.71□□□□□ -1.82
SPC72YAL047C TYW3P53177 273 aa3.71□□□□□ -1.82
SPC72YAL047C CWC24P53769 259 aa3.71□□□□□ -1.82
SPC72YAL047C CDA2Q06703 312 aa3.71□□□□□ -1.82
SPC72YAL047C INO1P11986 533 aa3.71□□□□□ -1.82
SPC72YAL047C BAS1P22035 811 aa3.71□□□□□ -1.82
SPC72YAL047C SNF7P39929 240 aaKnown RBP3.71□□□□□ -1.82
SPC72YAL047C SNU71P53207 620 aaKnown RBP3.71□□□□□ -1.82
SPC72YAL047C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
SPC72YAL047C RSM24Q03976 319 aa3.71□□□□□ -1.82
SPC72YAL047C JIP5Q06214 492 aaPredicted RBP3.71□□□□□ -1.82
SPC72YAL047C SPP382Q06411 708 aaPredicted RBP3.71□□□□□ -1.82
SPC72YAL047C MOT2P34909 587 aaKnown RBP3.7□□□□□ -1.82
SPC72YAL047C RFC5P38251 354 aa3.7□□□□□ -1.82
SPC72YAL047C AIM3P38266 947 aaKnown RBP3.7□□□□□ -1.82
SPC72YAL047C MET10P39692 1035 aa3.7□□□□□ -1.82
SPC72YAL047C KRI1P42846 591 aaKnown RBP3.7□□□□□ -1.82
SPC72YAL047C SVF1Q05515 481 aa3.7□□□□□ -1.82
SPC72YAL047C DUT1P33317 147 aa3.69□□□□□ -1.82
SPC72YAL047C YKL107WP34251 309 aa3.69□□□□□ -1.82
SPC72YAL047C TSA1P34760 196 aaKnown RBP3.69□□□□□ -1.82
SPC72YAL047C YFL054CP43549 646 aa3.69□□□□□ -1.82
SPC72YAL047C GDE1Q02979 1223 aa3.69□□□□□ -1.82
SPC72YAL047C SVS1Q12254 260 aa3.69□□□□□ -1.82
SPC72YAL047C RKM4Q12504 494 aa3.69□□□□□ -1.82
SPC72YAL047C KIN2P13186 1147 aaKnown RBP3.69□□□□□ -1.82
SPC72YAL047C EEB1Q02891 456 aa3.69□□□□□ -1.82
SPC72YAL047C ACM1Q08981 209 aa3.69□□□□□ -1.82
SPC72YAL047C CYC1P00044 109 aaPredicted RBP3.68□□□□□ -1.82
SPC72YAL047C THS1P04801 734 aaKnown RBP3.68□□□□□ -1.82
SPC72YAL047C UGA2P38067 497 aa3.68□□□□□ -1.82
SPC72YAL047C MXR1P40029 184 aa3.68□□□□□ -1.82
SPC72YAL047C YGL176CP46945 554 aa3.68□□□□□ -1.82
SPC72YAL047C RIM8P53179 542 aa3.68□□□□□ -1.82
SPC72YAL047C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
SPC72YAL047C RPS13P05756 151 aaKnown RBP3.67□□□□□ -1.82
SPC72YAL047C RPL11AP0C0W9 174 aaKnown RBP3.67□□□□□ -1.82
SPC72YAL047C PRP6P19735 899 aaPredicted RBP3.67□□□□□ -1.82
SPC72YAL047C APL1P27351 700 aa3.67□□□□□ -1.82
SPC72YAL047C FAA4P47912 694 aaKnown RBP3.67□□□□□ -1.82
SPC72YAL047C SGD1Q06132 899 aa3.67□□□□□ -1.82
SPC72YAL047C FAL1Q12099 399 aaKnown RBP3.67□□□□□ -1.82
SPC72YAL047C RPL11BQ3E757 174 aaPredicted RBP3.67□□□□□ -1.82
SPC72YAL047C SOD2P00447 233 aa3.67□□□□□ -1.82
SPC72YAL047C CMP2P14747 604 aa3.67□□□□□ -1.82
SPC72YAL047C GEM1P39722 662 aa3.67□□□□□ -1.82
SPC72YAL047C YLR225CQ05948 407 aaKnown RBP3.67□□□□□ -1.82
SPC72YAL047C MON2P48563 1636 aaPredicted RBP3.66□□□□□ -1.82
SPC72YAL047C TOD6P34219 525 aa3.66□□□□□ -1.82
SPC72YAL047C YKL222CP35995 705 aa3.66□□□□□ -1.82
SPC72YAL047C SPT20P50875 604 aa3.66□□□□□ -1.82
SPC72YAL047C INO80P53115 1489 aa3.66□□□□□ -1.82
SPC72YAL047C YGR053CP53234 283 aa3.65□□□□□ -1.82
SPC72YAL047C VPS16Q03308 798 aa3.65□□□□□ -1.82
SPC72YAL047C ROT1Q03691 256 aa3.65□□□□□ -1.82
SPC72YAL047C YPL277CQ08989 487 aa3.65□□□□□ -1.82
SPC72YAL047C PIN2Q12057 282 aa3.65□□□□□ -1.82
SPC72YAL047C BI4P03879 638 aa3.64□□□□□ -1.83
SPC72YAL047C PIN4P34217 668 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SPC72YAL047C LAM1P38851 1228 aa3.64□□□□□ -1.83
SPC72YAL047C PNT1P38969 423 aa3.64□□□□□ -1.83
SPC72YAL047C RRT14P40470 206 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms