RNA–Protein interactions for RNA: YAL013W

DEP1, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene DEP1, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEP1YAL013W MPE1P35728 441 aaKnown RBP15.76■□□□□ 0.11
DEP1YAL013W MFM1Q02783 413 aa15.76■□□□□ 0.11
DEP1YAL013W YPR148CQ06523 435 aa15.76■□□□□ 0.11
DEP1YAL013W WHI4Q07655 649 aaKnown RBP15.76■□□□□ 0.11
DEP1YAL013W HVG1P0CE11 249 aa15.75■□□□□ 0.11
DEP1YAL013W SAM1P10659 382 aaKnown RBP15.75■□□□□ 0.11
DEP1YAL013W ISW1P38144 1129 aa15.75■□□□□ 0.11
DEP1YAL013W ORC6P38826 435 aa15.75■□□□□ 0.11
DEP1YAL013W VTC2P43585 828 aa15.75■□□□□ 0.11
DEP1YAL013W ROG3P43602 733 aa15.75■□□□□ 0.11
DEP1YAL013W CDC15P27636 974 aa15.74■□□□□ 0.11
DEP1YAL013W ADY4Q05955 493 aa15.74■□□□□ 0.11
DEP1YAL013W YEL076C-AP0CX16 216 aa15.73■□□□□ 0.11
DEP1YAL013W YLR464WP0CX17 216 aa15.73■□□□□ 0.11
DEP1YAL013W YEL076CP39971 216 aa15.73■□□□□ 0.11
DEP1YAL013W CBK1P53894 756 aa15.73■□□□□ 0.11
DEP1YAL013W FUS2Q05670 677 aa15.73■□□□□ 0.11
DEP1YAL013W ISY1P21374 235 aaPredicted RBP15.72■□□□□ 0.11
DEP1YAL013W GSY1P23337 708 aa15.72■□□□□ 0.11
DEP1YAL013W PET10P36139 283 aa15.72■□□□□ 0.11
DEP1YAL013W PSR2Q07949 397 aa15.72■□□□□ 0.11
DEP1YAL013W CFT2Q12102 859 aaPredicted RBP15.72■□□□□ 0.11
DEP1YAL013W SMC6Q12749 1114 aa15.72■□□□□ 0.11
DEP1YAL013W SAC6P32599 642 aaKnown RBP15.71■□□□□ 0.11
DEP1YAL013W MCD4P36051 919 aa15.71■□□□□ 0.11
DEP1YAL013W MCR1P36060 302 aaKnown RBP15.71■□□□□ 0.11
DEP1YAL013W BSD2P38356 321 aa15.71■□□□□ 0.11
DEP1YAL013W ERG7P38604 731 aa15.71■□□□□ 0.11
DEP1YAL013W GPB2P39717 880 aa15.71■□□□□ 0.11
DEP1YAL013W PTA1Q01329 785 aaPredicted RBP15.71■□□□□ 0.11
DEP1YAL013W TFC8Q12308 588 aa15.71■□□□□ 0.11
DEP1YAL013W ILV1P00927 576 aaKnown RBP15.7■□□□□ 0.1
DEP1YAL013W UTR4P32626 227 aa15.7■□□□□ 0.1
DEP1YAL013W YKR018CP36114 725 aa15.7■□□□□ 0.1
DEP1YAL013W PSY4P38193 441 aa15.7■□□□□ 0.1
DEP1YAL013W BCD1P38772 366 aa15.7■□□□□ 0.1
DEP1YAL013W BRE2P43132 505 aa15.7■□□□□ 0.1
DEP1YAL013W DUS3Q06053 668 aaKnown RBP15.7■□□□□ 0.1
DEP1YAL013W ISA1Q07821 250 aaPredicted RBP15.7■□□□□ 0.1
DEP1YAL013W MIP1P15801 1254 aa15.69■□□□□ 0.1
DEP1YAL013W VMA2P16140 517 aaKnown RBP15.69■□□□□ 0.1
DEP1YAL013W UBP11P36026 717 aa15.69■□□□□ 0.1
DEP1YAL013W MIC60P36112 540 aa15.69■□□□□ 0.1
DEP1YAL013W NOC2P39744 710 aaKnown RBP15.69■□□□□ 0.1
DEP1YAL013W WAR1Q03631 944 aa15.69■□□□□ 0.1
DEP1YAL013W RBA50Q04418 439 aa15.69■□□□□ 0.1
DEP1YAL013W AFT2Q08957 416 aa15.69■□□□□ 0.1
DEP1YAL013W TY1B-AO13527 1196 aaKnown RBP15.68■□□□□ 0.1
DEP1YAL013W SHP1P34223 423 aa15.68■□□□□ 0.1
DEP1YAL013W NUP82P40368 713 aa15.68■□□□□ 0.1
DEP1YAL013W GPD2P41911 440 aaKnown RBP15.68■□□□□ 0.1
DEP1YAL013W SES1P07284 462 aaKnown RBP15.67■□□□□ 0.1
DEP1YAL013W ESS1P22696 170 aa15.67■□□□□ 0.1
DEP1YAL013W MCM2P29469 868 aa15.67■□□□□ 0.1
DEP1YAL013W ADE17P38009 592 aaKnown RBP15.67■□□□□ 0.1
DEP1YAL013W TFG2P41896 400 aaPredicted RBP15.67■□□□□ 0.1
DEP1YAL013W CTR1P49573 406 aa15.67■□□□□ 0.1
DEP1YAL013W PKC1P24583 1151 aa15.66■□□□□ 0.1
DEP1YAL013W IXR1P33417 597 aa15.66■□□□□ 0.1
DEP1YAL013W YGR237CP50089 785 aa15.66■□□□□ 0.1
DEP1YAL013W CST9Q06032 482 aa15.66■□□□□ 0.1
DEP1YAL013W PGM1P33401 570 aaKnown RBP15.65■□□□□ 0.1
DEP1YAL013W YGR125WP53273 1036 aa15.65■□□□□ 0.1
DEP1YAL013W CNM67P53865 581 aaKnown RBP15.65■□□□□ 0.1
DEP1YAL013W YAF9P53930 226 aa15.65■□□□□ 0.1
DEP1YAL013W PHM6Q05637 104 aa15.65■□□□□ 0.1
DEP1YAL013W CDC19P00549 500 aaKnown RBP15.64■□□□□ 0.09
DEP1YAL013W PRP22P24384 1145 aaKnown RBP15.64■□□□□ 0.09
DEP1YAL013W CDC60P26637 1090 aaKnown RBP15.64■□□□□ 0.09
DEP1YAL013W EUG1P32474 517 aa15.64■□□□□ 0.09
DEP1YAL013W VPS29P38759 282 aa15.64■□□□□ 0.09
DEP1YAL013W PGA2P53903 129 aa15.64■□□□□ 0.09
DEP1YAL013W GFD1Q04839 188 aaKnown RBP15.64■□□□□ 0.09
DEP1YAL013W YLH47Q06493 454 aa15.64■□□□□ 0.09
DEP1YAL013W TMA16Q08687 178 aa15.64■□□□□ 0.09
DEP1YAL013W ERP3Q12403 225 aa15.64■□□□□ 0.09
DEP1YAL013W PGK1P00560 416 aaKnown RBP15.63■□□□□ 0.09
DEP1YAL013W SUV3P32580 737 aa15.63■□□□□ 0.09
DEP1YAL013W APE3P37302 537 aaKnown RBP15.63■□□□□ 0.09
DEP1YAL013W AIP1P46680 615 aaKnown RBP15.63■□□□□ 0.09
DEP1YAL013W LSC2P53312 427 aa15.63■□□□□ 0.09
DEP1YAL013W DIP5P53388 608 aa15.63■□□□□ 0.09
DEP1YAL013W HCR1Q05775 265 aaKnown RBP15.63■□□□□ 0.09
DEP1YAL013W CLB5P30283 435 aa15.62■□□□□ 0.09
DEP1YAL013W ASH1P34233 588 aa15.62■□□□□ 0.09
DEP1YAL013W MOT2P34909 587 aaKnown RBP15.62■□□□□ 0.09
DEP1YAL013W SIP3P38717 1229 aa15.62■□□□□ 0.09
DEP1YAL013W ETP1P38748 585 aaKnown RBP15.62■□□□□ 0.09
DEP1YAL013W JIP4Q03361 876 aa15.62■□□□□ 0.09
DEP1YAL013W RKM4Q12504 494 aa15.62■□□□□ 0.09
DEP1YAL013W CLN3P13365 580 aa15.61■□□□□ 0.09
DEP1YAL013W TKL1P23254 680 aaKnown RBP15.61■□□□□ 0.09
DEP1YAL013W PXL1P36166 706 aa15.61■□□□□ 0.09
DEP1YAL013W PIH1P38768 344 aa15.61■□□□□ 0.09
DEP1YAL013W GUP1P53154 560 aa15.61■□□□□ 0.09
DEP1YAL013W SPP382Q06411 708 aaPredicted RBP15.61■□□□□ 0.09
DEP1YAL013W SUP45P12385 437 aaKnown RBP15.6■□□□□ 0.09
DEP1YAL013W YGL039WP53183 348 aaKnown RBP15.6■□□□□ 0.09
DEP1YAL013W RAM2P29703 316 aa15.59■□□□□ 0.09
DEP1YAL013W DBP7P36120 742 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms