RNA–Protein interactions for RNA: YAL013W

DEP1, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene DEP1, Length 1,218 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DEP1	YAL013W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	18.52	■□□□□ 0.56	RIP-Chip
DEP1	YAL013W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	13.98	□□□□□ -0.17	RIP-Chip
DEP1	YAL013W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	13.95	□□□□□ -0.18	RIP-Chip
DEP1	YAL013W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	13.63	□□□□□ -0.23	RIP-Chip
DEP1	YAL013W	LYS1	P38998	373 aa	RIP-Chip data	13.42	□□□□□ -0.26	RIP-Chip
DEP1	YAL013W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	9.2	□□□□□ -0.94	RIP-Chip

Retrieved 6 of 6 RNA–protein pairs in 4 ms