RNA–Protein interactions for RNA: ENST00000638575.1

KCNMA1-240, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-240ENST00000638575 FAM182BQ5T319 152 aa13.5□□□□□ -0.25
KCNMA1-240ENST00000638575 SLC52A2Q9HAB3 445 aa13.5□□□□□ -0.25
KCNMA1-240ENST00000638575 IL16Q14005 1332 aa13.5□□□□□ -0.25
KCNMA1-240ENST00000638575 MYH14Q7Z406 1995 aaKnown RBP13.49□□□□□ -0.25
KCNMA1-240ENST00000638575 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
KCNMA1-240ENST00000638575 CHL1O00533 1208 aa13.49□□□□□ -0.25
KCNMA1-240ENST00000638575 KCNQ2O43526 872 aa13.49□□□□□ -0.25
KCNMA1-240ENST00000638575 DDX54Q8TDD1 881 aaKnown RBP13.49□□□□□ -0.25
KCNMA1-240ENST00000638575 WDR63Q8IWG1 891 aa13.48□□□□□ -0.25
KCNMA1-240ENST00000638575 PIGBQ92521 554 aa13.48□□□□□ -0.25
KCNMA1-240ENST00000638575 ILDR2Q71H61 639 aa13.47□□□□□ -0.25
KCNMA1-240ENST00000638575 HSP90AB1P08238 724 aaKnown RBP13.47□□□□□ -0.25
KCNMA1-240ENST00000638575 UBR3Q6ZT12 1888 aa13.46□□□□□ -0.25
KCNMA1-240ENST00000638575 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.25
KCNMA1-240ENST00000638575 BABAM1Q9NWV8 329 aa13.46□□□□□ -0.25
KCNMA1-240ENST00000638575 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.25
KCNMA1-240ENST00000638575 SLFN5Q08AF3 891 aa13.45□□□□□ -0.26
KCNMA1-240ENST00000638575 NFATC2IPQ8NCF5 419 aa13.45□□□□□ -0.26
KCNMA1-240ENST00000638575 CFAP44Q96MT7 982 aa13.45□□□□□ -0.26
KCNMA1-240ENST00000638575 ATG3Q9NT62 314 aa13.45□□□□□ -0.26
KCNMA1-240ENST00000638575 COL24A1Q17RW2 1714 aa13.45□□□□□ -0.26
KCNMA1-240ENST00000638575 KCNQ3O43525 872 aa13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 FAM196AQ6ZSG2 479 aa13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 IFT57Q9NWB7 429 aa13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 CACNA1FO60840 1977 aa13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 C4BP0C0L5 1744 aa13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 PRIM1P49642 420 aaKnown RBP13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 LMOD3Q0VAK6 560 aa13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 N4BP2Q86UW6 1770 aaPredicted RBP13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 CDCA7LQ96GN5 454 aa13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 C4AP0C0L4 1744 aa13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 PDE3BQ13370 1112 aa13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 DUSP27Q5VZP5 1158 aa13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 BCL11BQ9C0K0 894 aaPredicted RBP13.44□□□□□ -0.26
KCNMA1-240ENST00000638575 NEUROD2Q15784 382 aa13.43□□□□□ -0.26
KCNMA1-240ENST00000638575 MBIPQ9NS73 344 aa13.43□□□□□ -0.26
KCNMA1-240ENST00000638575 TAF7Q15545 349 aaPredicted RBP13.42□□□□□ -0.26
KCNMA1-240ENST00000638575 BCORQ6W2J9 1755 aa13.42□□□□□ -0.26
KCNMA1-240ENST00000638575 FANCIQ9NVI1 1328 aa13.42□□□□□ -0.26
KCNMA1-240ENST00000638575 HNRNPUQ00839 825 aaKnown RBP eCLIP13.42□□□□□ -0.26
KCNMA1-240ENST00000638575 PROM2Q8N271 834 aa13.42□□□□□ -0.26
KCNMA1-240ENST00000638575 ASAP1Q9ULH1 1129 aa13.42□□□□□ -0.26
KCNMA1-240ENST00000638575 ACSBG1Q96GR2 724 aa13.41□□□□□ -0.26
KCNMA1-240ENST00000638575 EIF4A1P60842 406 aaKnown RBP13.41□□□□□ -0.26
KCNMA1-240ENST00000638575 ZNF790Q6PG37 636 aa13.4□□□□□ -0.26
KCNMA1-240ENST00000638575 MIS18AQ9NYP9 233 aa13.4□□□□□ -0.26
KCNMA1-240ENST00000638575 SLC39A6Q13433 755 aa13.39□□□□□ -0.27
KCNMA1-240ENST00000638575 LRP10Q7Z4F1 713 aa13.39□□□□□ -0.27
KCNMA1-240ENST00000638575 RTF1Q92541 710 aaKnown RBP13.39□□□□□ -0.27
KCNMA1-240ENST00000638575 CASZ1Q86V15 1759 aa13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 PALLDQ8WX93 1383 aa13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 CABP4P57796 275 aa13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 TSR2Q969E8 191 aaKnown RBP13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 KAT6BQ8WYB5 2073 aa13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 PLSCR1O15162 318 aa13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 TRIM37O94972 964 aa13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 KRT24Q2M2I5 525 aa13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 TMOD3Q9NYL9 352 aa13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 SALL2Q9Y467 1007 aaPredicted RBP13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 SCN7AQ01118 1682 aa13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 NEFMP07197 916 aa13.38□□□□□ -0.27
KCNMA1-240ENST00000638575 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
KCNMA1-240ENST00000638575 BTBD11A6QL63 1104 aa13.37□□□□□ -0.27
KCNMA1-240ENST00000638575 ZNF496Q96IT1 587 aaPredicted RBP13.37□□□□□ -0.27
KCNMA1-240ENST00000638575 LRRC4BQ9NT99 713 aa13.37□□□□□ -0.27
KCNMA1-240ENST00000638575 GNAI1P63096 354 aa13.37□□□□□ -0.27
KCNMA1-240ENST00000638575 TSPYL6Q8N831 410 aa13.37□□□□□ -0.27
KCNMA1-240ENST00000638575 C8orf58Q8NAV2 365 aa13.37□□□□□ -0.27
KCNMA1-240ENST00000638575 CAMKK2Q96RR4 588 aa13.37□□□□□ -0.27
KCNMA1-240ENST00000638575 E9PSI1 815 aa13.37□□□□□ -0.27
KCNMA1-240ENST00000638575 VSIG10Q8N0Z9 540 aa13.36□□□□□ -0.27
KCNMA1-240ENST00000638575 ARFGEF2Q9Y6D5 1785 aa13.36□□□□□ -0.27
KCNMA1-240ENST00000638575 GIGYF1O75420 1035 aaPredicted RBP13.36□□□□□ -0.27
KCNMA1-240ENST00000638575 ITPK1Q13572 414 aa13.36□□□□□ -0.27
KCNMA1-240ENST00000638575 A0A0G2JS52 829 aa13.35□□□□□ -0.27
KCNMA1-240ENST00000638575 MYT1Q01538 1121 aa13.35□□□□□ -0.27
KCNMA1-240ENST00000638575 TEFQ10587 303 aa13.35□□□□□ -0.27
KCNMA1-240ENST00000638575 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.27
KCNMA1-240ENST00000638575 CALD1Q05682 793 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-240ENST00000638575 PDIA6Q15084 440 aa13.35□□□□□ -0.27
KCNMA1-240ENST00000638575 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
KCNMA1-240ENST00000638575 VAMP4O75379 141 aa13.34□□□□□ -0.27
KCNMA1-240ENST00000638575 TSPYL4Q9UJ04 414 aa13.34□□□□□ -0.27
KCNMA1-240ENST00000638575 AMIGO3Q86WK7 504 aa13.33□□□□□ -0.28
KCNMA1-240ENST00000638575 HOXB7P09629 217 aa13.33□□□□□ -0.28
KCNMA1-240ENST00000638575 SOS1Q07889 1333 aaPredicted RBP13.33□□□□□ -0.28
KCNMA1-240ENST00000638575 NUP98P52948 1817 aa13.32□□□□□ -0.28
KCNMA1-240ENST00000638575 LOC102724428A0A0B4J2F2 783 aa13.32□□□□□ -0.28
KCNMA1-240ENST00000638575 SIK1P57059 783 aa13.32□□□□□ -0.28
KCNMA1-240ENST00000638575 LINC00116Q8NCU8 138 aa13.32□□□□□ -0.28
KCNMA1-240ENST00000638575 EXOSC9Q06265 439 aaKnown RBP13.32□□□□□ -0.28
KCNMA1-240ENST00000638575 CYP19A1P11511 503 aaPredicted RBP13.31□□□□□ -0.28
KCNMA1-240ENST00000638575 INTS5Q6P9B9 1019 aaKnown RBP13.31□□□□□ -0.28
KCNMA1-240ENST00000638575 USP16Q9Y5T5 823 aa13.31□□□□□ -0.28
KCNMA1-240ENST00000638575 CCDC125Q86Z20 511 aa13.31□□□□□ -0.28
KCNMA1-240ENST00000638575 SMARCC1Q92922 1105 aaPredicted RBP13.3□□□□□ -0.28
KCNMA1-240ENST00000638575 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
KCNMA1-240ENST00000638575 FMNL2Q96PY5 1086 aa13.3□□□□□ -0.28
KCNMA1-240ENST00000638575 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms