RNA–Protein interactions for RNA: ENST00000638575.1

KCNMA1-240, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-240ENST00000638575 NISCHQ9Y2I1 1504 aa24.89■■□□□ 1.58
KCNMA1-240ENST00000638575 CCDC180Q9P1Z9 1646 aa22.08■■□□□ 1.13
KCNMA1-240ENST00000638575 ABCC9O60706 1549 aa20.98■□□□□ 0.95
KCNMA1-240ENST00000638575 ZCCHC6Q5VYS8 1495 aaKnown RBP20.86■□□□□ 0.93
KCNMA1-240ENST00000638575 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
KCNMA1-240ENST00000638575 MYO15BQ96JP2 1530 aa20.67■□□□□ 0.9
KCNMA1-240ENST00000638575 NACADO15069 1562 aa20.55■□□□□ 0.88
KCNMA1-240ENST00000638575 RB1CC1Q8TDY2 1594 aa20.44■□□□□ 0.86
KCNMA1-240ENST00000638575 UNC13AQ9UPW8 1703 aa20.27■□□□□ 0.84
KCNMA1-240ENST00000638575 DCAF8L2P0C7V8 631 aa20.1■□□□□ 0.81
KCNMA1-240ENST00000638575 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
KCNMA1-240ENST00000638575 SCRIBQ14160 1630 aa20.01■□□□□ 0.79
KCNMA1-240ENST00000638575 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
KCNMA1-240ENST00000638575 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.72
KCNMA1-240ENST00000638575 CECR2Q9BXF3 1484 aa19.34■□□□□ 0.69
KCNMA1-240ENST00000638575 EIF4G1Q04637 1599 aaKnown RBP19.33■□□□□ 0.68
KCNMA1-240ENST00000638575 SMARCA4P51532 1647 aa19.27■□□□□ 0.68
KCNMA1-240ENST00000638575 BAZ1AQ9NRL2 1556 aaPredicted RBP19.22■□□□□ 0.67
KCNMA1-240ENST00000638575 MROH2BQ7Z745 1585 aa19.2■□□□□ 0.66
KCNMA1-240ENST00000638575 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
KCNMA1-240ENST00000638575 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
KCNMA1-240ENST00000638575 RSF1Q96T23 1441 aaPredicted RBP19.06■□□□□ 0.64
KCNMA1-240ENST00000638575 WIZO95785 1651 aa19.03■□□□□ 0.64
KCNMA1-240ENST00000638575 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
KCNMA1-240ENST00000638575 ATAD2BQ9ULI0 1458 aa19.01■□□□□ 0.63
KCNMA1-240ENST00000638575 SMARCA2P51531 1590 aa18.96■□□□□ 0.63
KCNMA1-240ENST00000638575 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
KCNMA1-240ENST00000638575 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
KCNMA1-240ENST00000638575 TOP2AP11388 1531 aaKnown RBP18.82■□□□□ 0.6
KCNMA1-240ENST00000638575 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.6
KCNMA1-240ENST00000638575 CCDC88BA6NC98 1476 aa18.56■□□□□ 0.56
KCNMA1-240ENST00000638575 SUPT5HO00267 1087 aaKnown RBP18.47■□□□□ 0.55
KCNMA1-240ENST00000638575 PRDM2Q13029 1718 aa18.47■□□□□ 0.55
KCNMA1-240ENST00000638575 LAMC3Q9Y6N6 1575 aa18.41■□□□□ 0.54
KCNMA1-240ENST00000638575 CFTRP13569 1480 aa18.39■□□□□ 0.54
KCNMA1-240ENST00000638575 NESP48681 1621 aa18.37■□□□□ 0.53
KCNMA1-240ENST00000638575 CADPSQ9ULU8 1353 aa18.32■□□□□ 0.52
KCNMA1-240ENST00000638575 KIF21AQ7Z4S6 1674 aa18.28■□□□□ 0.52
KCNMA1-240ENST00000638575 THOC2Q8NI27 1593 aaKnown RBP18.17■□□□□ 0.5
KCNMA1-240ENST00000638575 FANCD2Q9BXW9 1451 aa18.13■□□□□ 0.49
KCNMA1-240ENST00000638575 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
KCNMA1-240ENST00000638575 WDR62O43379 1518 aa18.04■□□□□ 0.48
KCNMA1-240ENST00000638575 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
KCNMA1-240ENST00000638575 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
KCNMA1-240ENST00000638575 BIVM-ERCC5R4GMW8 1640 aa18.01■□□□□ 0.47
KCNMA1-240ENST00000638575 CUX1P39880 1505 aa17.99■□□□□ 0.47
KCNMA1-240ENST00000638575 MRC2Q9UBG0 1479 aa17.99■□□□□ 0.47
KCNMA1-240ENST00000638575 ABCC8Q09428 1581 aa17.99■□□□□ 0.47
KCNMA1-240ENST00000638575 SYNJ1O43426 1573 aa17.97■□□□□ 0.47
KCNMA1-240ENST00000638575 DNMBPQ6XZF7 1577 aa17.97■□□□□ 0.47
KCNMA1-240ENST00000638575 TOP2BQ02880 1626 aa17.95■□□□□ 0.46
KCNMA1-240ENST00000638575 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
KCNMA1-240ENST00000638575 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
KCNMA1-240ENST00000638575 WDR97A6NE52 1622 aa17.88■□□□□ 0.45
KCNMA1-240ENST00000638575 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
KCNMA1-240ENST00000638575 CUX2O14529 1486 aa17.85■□□□□ 0.45
KCNMA1-240ENST00000638575 WRNQ14191 1432 aaPredicted RBP eCLIP17.85■□□□□ 0.45
KCNMA1-240ENST00000638575 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
KCNMA1-240ENST00000638575 FGD5Q6ZNL6 1462 aa17.78■□□□□ 0.44
KCNMA1-240ENST00000638575 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
KCNMA1-240ENST00000638575 ABCA10Q8WWZ4 1543 aa17.69■□□□□ 0.42
KCNMA1-240ENST00000638575 RAD54L2Q9Y4B4 1467 aa17.68■□□□□ 0.42
KCNMA1-240ENST00000638575 IFT140Q96RY7 1462 aa17.68■□□□□ 0.42
KCNMA1-240ENST00000638575 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.42
KCNMA1-240ENST00000638575 EIF4G3O43432 1585 aaKnown RBP17.63■□□□□ 0.41
KCNMA1-240ENST00000638575 ZNF608Q9ULD9 1512 aaPredicted RBP17.63■□□□□ 0.41
KCNMA1-240ENST00000638575 SOGA1O94964 1423 aa17.61■□□□□ 0.41
KCNMA1-240ENST00000638575 PBRM1Q86U86 1689 aa17.59■□□□□ 0.41
KCNMA1-240ENST00000638575 RUSC2Q8N2Y8 1516 aa17.52■□□□□ 0.4
KCNMA1-240ENST00000638575 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.39
KCNMA1-240ENST00000638575 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
KCNMA1-240ENST00000638575 GAPVD1Q14C86 1478 aa17.46■□□□□ 0.39
KCNMA1-240ENST00000638575 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
KCNMA1-240ENST00000638575 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
KCNMA1-240ENST00000638575 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
KCNMA1-240ENST00000638575 GRIN2BQ13224 1484 aa17.41■□□□□ 0.38
KCNMA1-240ENST00000638575 CUL7Q14999 1698 aa17.4■□□□□ 0.38
KCNMA1-240ENST00000638575 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
KCNMA1-240ENST00000638575 IGF1RP08069 1367 aa17.39■□□□□ 0.37
KCNMA1-240ENST00000638575 MAGI1Q96QZ7 1491 aaPredicted RBP17.37■□□□□ 0.37
KCNMA1-240ENST00000638575 CHD1O14646 1710 aa17.37■□□□□ 0.37
KCNMA1-240ENST00000638575 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
KCNMA1-240ENST00000638575 PRXQ9BXM0 1461 aa17.34■□□□□ 0.37
KCNMA1-240ENST00000638575 EEA1Q15075 1411 aa17.34■□□□□ 0.37
KCNMA1-240ENST00000638575 KIF21BO75037 1637 aa17.3■□□□□ 0.36
KCNMA1-240ENST00000638575 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
KCNMA1-240ENST00000638575 FHAD1B1AJZ9 1412 aa17.28■□□□□ 0.36
KCNMA1-240ENST00000638575 CEP170Q5SW79 1584 aa17.24■□□□□ 0.35
KCNMA1-240ENST00000638575 GRIN2AQ12879 1464 aa17.24■□□□□ 0.35
KCNMA1-240ENST00000638575 CLASP1Q7Z460 1538 aa17.22■□□□□ 0.35
KCNMA1-240ENST00000638575 NUP160Q12769 1436 aa17.21■□□□□ 0.34
KCNMA1-240ENST00000638575 CARMIL1Q5VZK9 1371 aa17.19■□□□□ 0.34
KCNMA1-240ENST00000638575 CTTNBP2Q8WZ74 1663 aa17.19■□□□□ 0.34
KCNMA1-240ENST00000638575 RAPGEF2Q9Y4G8 1499 aa17.18■□□□□ 0.34
KCNMA1-240ENST00000638575 SHROOM2Q13796 1616 aa17.16■□□□□ 0.34
KCNMA1-240ENST00000638575 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
KCNMA1-240ENST00000638575 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
KCNMA1-240ENST00000638575 KIAA0586Q9BVV6 1533 aa17.04■□□□□ 0.32
KCNMA1-240ENST00000638575 IQGAP2Q13576 1575 aa17.03■□□□□ 0.32
KCNMA1-240ENST00000638575 FAM9AQ8IZU1 332 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms