RNA–Protein interactions for RNA: ENST00000629886.2

UBE3A-219, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-219ENST00000629886 ANKRD36BQ8N2N9 1353 aa7.03□□□□□ -1.28
UBE3A-219ENST00000629886 USP47Q96K76 1375 aa7.03□□□□□ -1.28
UBE3A-219ENST00000629886 PPLO60437 1756 aa7.03□□□□□ -1.28
UBE3A-219ENST00000629886 BRCA1P38398 1863 aaKnown RBP7.02□□□□□ -1.28
UBE3A-219ENST00000629886 CIAPIN1Q6FI81 312 aa7.02□□□□□ -1.29
UBE3A-219ENST00000629886 CNTROBQ8N137 903 aa7.02□□□□□ -1.29
UBE3A-219ENST00000629886 NUDT16Q96DE0 195 aaKnown RBP7.02□□□□□ -1.29
UBE3A-219ENST00000629886 SNX27Q96L92 541 aa7.02□□□□□ -1.29
UBE3A-219ENST00000629886 TAF1DQ9H5J8 278 aaPredicted RBP7.02□□□□□ -1.29
UBE3A-219ENST00000629886 EIF3AQ14152 1382 aaKnown RBP7.02□□□□□ -1.29
UBE3A-219ENST00000629886 SSFA2P28290 1259 aa7.01□□□□□ -1.29
UBE3A-219ENST00000629886 PLA2G5P39877 138 aa7.01□□□□□ -1.29
UBE3A-219ENST00000629886 BRPF1P55201 1214 aaPredicted RBP7.01□□□□□ -1.29
UBE3A-219ENST00000629886 TOGARAM1Q9Y4F4 1720 aa7.01□□□□□ -1.29
UBE3A-219ENST00000629886 C5P01031 1676 aa7□□□□□ -1.29
UBE3A-219ENST00000629886 POLR3AO14802 1390 aaPredicted RBP7□□□□□ -1.29
UBE3A-219ENST00000629886 SOX12O15370 315 aa7□□□□□ -1.29
UBE3A-219ENST00000629886 HOXD11P31277 338 aaPredicted RBP7□□□□□ -1.29
UBE3A-219ENST00000629886 NLRP6P59044 892 aa7□□□□□ -1.29
UBE3A-219ENST00000629886 ERFEQ4G0M1 354 aa7□□□□□ -1.29
UBE3A-219ENST00000629886 ARHGEF25Q86VW2 580 aa7□□□□□ -1.29
UBE3A-219ENST00000629886 DDX21Q9NR30 783 aaKnown RBP eCLIP7□□□□□ -1.29
UBE3A-219ENST00000629886 NLRP2Q9NX02 1062 aa7□□□□□ -1.29
UBE3A-219ENST00000629886 CPSF1Q10570 1443 aaKnown RBP7□□□□□ -1.29
UBE3A-219ENST00000629886 BRCA2P51587 3418 aa6.99□□□□□ -1.29
UBE3A-219ENST00000629886 TIAM2Q8IVF5 1701 aa6.99□□□□□ -1.29
UBE3A-219ENST00000629886 IQCA1LA6NCM1 817 aa6.99□□□□□ -1.29
UBE3A-219ENST00000629886 NFKBIEO00221 500 aa6.99□□□□□ -1.29
UBE3A-219ENST00000629886 NBPF1Q3BBV0 1214 aa6.99□□□□□ -1.29
UBE3A-219ENST00000629886 RGL3Q3MIN7 710 aa6.99□□□□□ -1.29
UBE3A-219ENST00000629886 CFAP70Q5T0N1 1121 aa6.99□□□□□ -1.29
UBE3A-219ENST00000629886 CTU1Q7Z7A3 348 aaKnown RBP6.99□□□□□ -1.29
UBE3A-219ENST00000629886 FAM122AQ96E09 287 aa6.99□□□□□ -1.29
UBE3A-219ENST00000629886 OTUD5Q96G74 571 aa6.99□□□□□ -1.29
UBE3A-219ENST00000629886 TRIOBPQ9H2D6 2365 aa6.99□□□□□ -1.29
UBE3A-219ENST00000629886 TMF1P82094 1093 aa6.98□□□□□ -1.29
UBE3A-219ENST00000629886 FAM50AQ14320 339 aaKnown RBP6.98□□□□□ -1.29
UBE3A-219ENST00000629886 CST9Q5W186 159 aa6.98□□□□□ -1.29
UBE3A-219ENST00000629886 NLGN1Q8N2Q7 840 aa6.98□□□□□ -1.29
UBE3A-219ENST00000629886 ZIC5Q96T25 663 aa6.98□□□□□ -1.29
UBE3A-219ENST00000629886 PARP3Q9Y6F1 533 aa6.98□□□□□ -1.29
UBE3A-219ENST00000629886 TLL2Q9Y6L7 1015 aa6.98□□□□□ -1.29
UBE3A-219ENST00000629886 PIK3C2GO75747 1445 aa6.98□□□□□ -1.29
UBE3A-219ENST00000629886 C4BP0C0L5 1744 aa6.98□□□□□ -1.29
UBE3A-219ENST00000629886 SLIT3O75094 1523 aa6.97□□□□□ -1.29
UBE3A-219ENST00000629886 CHRDL2Q6WN34 429 aa6.97□□□□□ -1.29
UBE3A-219ENST00000629886 CCDC24Q8N4L8 307 aa6.97□□□□□ -1.29
UBE3A-219ENST00000629886 C14orf93Q9H972 538 aaKnown RBP6.97□□□□□ -1.29
UBE3A-219ENST00000629886 RBM27Q9P2N5 1060 aaKnown RBP6.97□□□□□ -1.29
UBE3A-219ENST00000629886 TRAK1Q9UPV9 953 aa6.97□□□□□ -1.29
UBE3A-219ENST00000629886 CACNA1AO00555 2505 aa6.97□□□□□ -1.29
UBE3A-219ENST00000629886 PALLDQ8WX93 1383 aa6.96□□□□□ -1.29
UBE3A-219ENST00000629886 RANBP2P49792 3224 aaKnown RBP6.96□□□□□ -1.29
UBE3A-219ENST00000629886 NSD3Q9BZ95 1437 aa6.96□□□□□ -1.3
UBE3A-219ENST00000629886 RGPD5Q99666 1765 aa6.96□□□□□ -1.3
UBE3A-219ENST00000629886 POTEFA5A3E0 1075 aa6.96□□□□□ -1.3
UBE3A-219ENST00000629886 GNPATO15228 680 aa6.96□□□□□ -1.3
UBE3A-219ENST00000629886 LINC00116Q8NCU8 138 aa6.96□□□□□ -1.3
UBE3A-219ENST00000629886 DOT1LQ8TEK3 1739 aa6.96□□□□□ -1.3
UBE3A-219ENST00000629886 PLEKHG3A1L390 1219 aa6.95□□□□□ -1.3
UBE3A-219ENST00000629886 HMGB2P26583 209 aaKnown RBP6.95□□□□□ -1.3
UBE3A-219ENST00000629886 UBR3Q6ZT12 1888 aa6.95□□□□□ -1.3
UBE3A-219ENST00000629886 C4AP0C0L4 1744 aa6.94□□□□□ -1.3
UBE3A-219ENST00000629886 H0YGN5 161 aa6.94□□□□□ -1.3
UBE3A-219ENST00000629886 TRAF5O00463 557 aa6.94□□□□□ -1.3
UBE3A-219ENST00000629886 TRPA1O75762 1119 aa6.94□□□□□ -1.3
UBE3A-219ENST00000629886 GYS1P13807 737 aa6.94□□□□□ -1.3
UBE3A-219ENST00000629886 ADRA2BP18089 450 aa6.94□□□□□ -1.3
UBE3A-219ENST00000629886 EPHX2P34913 555 aa6.94□□□□□ -1.3
UBE3A-219ENST00000629886 SAPCD2Q86UD0 394 aa6.94□□□□□ -1.3
UBE3A-219ENST00000629886 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.94□□□□□ -1.3
UBE3A-219ENST00000629886 L3MBTL3Q96JM7 780 aaPredicted RBP6.94□□□□□ -1.3
UBE3A-219ENST00000629886 TAF1LQ8IZX4 1826 aa6.94□□□□□ -1.3
UBE3A-219ENST00000629886 CDK19Q9BWU1 502 aa6.93□□□□□ -1.3
UBE3A-219ENST00000629886 HACL1Q9UJ83 578 aa6.93□□□□□ -1.3
UBE3A-219ENST00000629886 CCDC61Q9Y6R9 512 aa6.93□□□□□ -1.3
UBE3A-219ENST00000629886 ADAMTSL1Q8N6G6 1762 aa6.92□□□□□ -1.3
UBE3A-219ENST00000629886 SOX1O00570 391 aaPredicted RBP6.92□□□□□ -1.3
UBE3A-219ENST00000629886 PKN2Q16513 984 aaKnown RBP6.92□□□□□ -1.3
UBE3A-219ENST00000629886 AKAP4Q5JQC9 854 aa6.92□□□□□ -1.3
UBE3A-219ENST00000629886 TRAPPC3LQ5T215 181 aa6.92□□□□□ -1.3
UBE3A-219ENST00000629886 PNMA8AQ86V59 439 aaPredicted RBP6.92□□□□□ -1.3
UBE3A-219ENST00000629886 LRCH3Q96II8 777 aa6.92□□□□□ -1.3
UBE3A-219ENST00000629886 RNF186Q9NXI6 227 aa6.92□□□□□ -1.3
UBE3A-219ENST00000629886 ERBB4Q15303 1308 aa6.92□□□□□ -1.3
UBE3A-219ENST00000629886 CCDC88AQ3V6T2 1871 aa6.92□□□□□ -1.3
UBE3A-219ENST00000629886 LAMA3Q16787 3333 aa6.91□□□□□ -1.3
UBE3A-219ENST00000629886 DDR1Q08345 913 aa6.91□□□□□ -1.3
UBE3A-219ENST00000629886 MPRIPQ6WCQ1 1025 aa6.91□□□□□ -1.3
UBE3A-219ENST00000629886 SYNE4Q8N205 404 aa6.91□□□□□ -1.3
UBE3A-219ENST00000629886 TTLL6Q8N841 843 aa6.91□□□□□ -1.3
UBE3A-219ENST00000629886 ANKRD24Q8TF21 1146 aa6.91□□□□□ -1.3
UBE3A-219ENST00000629886 ARHGEF1Q92888 912 aaKnown RBP6.91□□□□□ -1.3
UBE3A-219ENST00000629886 SAGE1Q9NXZ1 904 aa6.91□□□□□ -1.3
UBE3A-219ENST00000629886 EN2P19622 333 aaPredicted RBP6.9□□□□□ -1.3
UBE3A-219ENST00000629886 NOGQ13253 232 aa6.9□□□□□ -1.3
UBE3A-219ENST00000629886 ITPK1Q13572 414 aa6.9□□□□□ -1.3
UBE3A-219ENST00000629886 KCNH5Q8NCM2 988 aa6.9□□□□□ -1.3
UBE3A-219ENST00000629886 RNF123Q5XPI4 1314 aa6.9□□□□□ -1.3
UBE3A-219ENST00000629886 MUC3AQ02505 3323 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms