RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 KCPQ6ZWJ8 1503 aa13.96□□□□□ -0.18
KCNMA1-225ENST00000626620 DCTN1Q14203 1278 aa13.95□□□□□ -0.18
KCNMA1-225ENST00000626620 NGEFQ8N5V2 710 aa13.95□□□□□ -0.18
KCNMA1-225ENST00000626620 TRMT2AQ8IZ69 625 aaKnown RBP13.95□□□□□ -0.18
KCNMA1-225ENST00000626620 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
KCNMA1-225ENST00000626620 SENP3-EIF4A1A0A087X0R7 540 aa13.95□□□□□ -0.18
KCNMA1-225ENST00000626620 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
KCNMA1-225ENST00000626620 PLSCR1O15162 318 aa13.94□□□□□ -0.18
KCNMA1-225ENST00000626620 TRIM37O94972 964 aa13.94□□□□□ -0.18
KCNMA1-225ENST00000626620 MPRIPQ6WCQ1 1025 aa13.94□□□□□ -0.18
KCNMA1-225ENST00000626620 MCM10Q7L590 875 aa13.94□□□□□ -0.18
KCNMA1-225ENST00000626620 SF3B2Q13435 895 aaKnown RBP13.94□□□□□ -0.18
KCNMA1-225ENST00000626620 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
KCNMA1-225ENST00000626620 THUMPD2Q9BTF0 503 aaKnown RBP13.94□□□□□ -0.18
KCNMA1-225ENST00000626620 C5P01031 1676 aa13.94□□□□□ -0.18
KCNMA1-225ENST00000626620 PTF1AQ7RTS3 328 aa13.93□□□□□ -0.18
KCNMA1-225ENST00000626620 TJP1Q07157 1748 aa13.93□□□□□ -0.18
KCNMA1-225ENST00000626620 ZBED9Q6R2W3 1325 aa13.93□□□□□ -0.18
KCNMA1-225ENST00000626620 ERVV-2B6SEH9 535 aa13.93□□□□□ -0.18
KCNMA1-225ENST00000626620 PROM2Q8N271 834 aa13.93□□□□□ -0.18
KCNMA1-225ENST00000626620 HEG1Q9ULI3 1381 aa13.92□□□□□ -0.18
KCNMA1-225ENST00000626620 COL5A3P25940 1745 aaPredicted RBP13.92□□□□□ -0.18
KCNMA1-225ENST00000626620 WDR63Q8IWG1 891 aa13.92□□□□□ -0.18
KCNMA1-225ENST00000626620 IL16Q14005 1332 aa13.91□□□□□ -0.18
KCNMA1-225ENST00000626620 PELP1Q8IZL8 1130 aaKnown RBP13.91□□□□□ -0.18
KCNMA1-225ENST00000626620 SLC52A2Q9HAB3 445 aa13.91□□□□□ -0.18
KCNMA1-225ENST00000626620 HSP90AB1P08238 724 aaKnown RBP13.91□□□□□ -0.18
KCNMA1-225ENST00000626620 C1orf141Q5JVX7 400 aa13.91□□□□□ -0.18
KCNMA1-225ENST00000626620 TAF1LQ8IZX4 1826 aa13.91□□□□□ -0.18
KCNMA1-225ENST00000626620 NEUROD2Q15784 382 aa13.9□□□□□ -0.18
KCNMA1-225ENST00000626620 BCL11BQ9C0K0 894 aaPredicted RBP13.9□□□□□ -0.18
KCNMA1-225ENST00000626620 LAMB4A4D0S4 1761 aa13.9□□□□□ -0.18
KCNMA1-225ENST00000626620 CHL1O00533 1208 aa13.9□□□□□ -0.18
KCNMA1-225ENST00000626620 KCNQ2O43526 872 aa13.89□□□□□ -0.19
KCNMA1-225ENST00000626620 PIGBQ92521 554 aa13.89□□□□□ -0.19
KCNMA1-225ENST00000626620 HNRNPUQ00839 825 aaKnown RBP eCLIP13.89□□□□□ -0.19
KCNMA1-225ENST00000626620 LMOD3Q0VAK6 560 aa13.89□□□□□ -0.19
KCNMA1-225ENST00000626620 PDE3BQ13370 1112 aa13.89□□□□□ -0.19
KCNMA1-225ENST00000626620 APBA3O96018 575 aa13.88□□□□□ -0.19
KCNMA1-225ENST00000626620 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
KCNMA1-225ENST00000626620 BABAM1Q9NWV8 329 aa13.88□□□□□ -0.19
KCNMA1-225ENST00000626620 PSDA5PKW4 1024 aaPredicted RBP13.88□□□□□ -0.19
KCNMA1-225ENST00000626620 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
KCNMA1-225ENST00000626620 CDCA7LQ96GN5 454 aa13.87□□□□□ -0.19
KCNMA1-225ENST00000626620 CFAP44Q96MT7 982 aa13.87□□□□□ -0.19
KCNMA1-225ENST00000626620 PRIM1P49642 420 aaKnown RBP13.87□□□□□ -0.19
KCNMA1-225ENST00000626620 IFT57Q9NWB7 429 aa13.87□□□□□ -0.19
KCNMA1-225ENST00000626620 NEFMP07197 916 aa13.87□□□□□ -0.19
KCNMA1-225ENST00000626620 R3HDM1Q15032 1099 aaKnown RBP13.87□□□□□ -0.19
KCNMA1-225ENST00000626620 KCNQ3O43525 872 aa13.86□□□□□ -0.19
KCNMA1-225ENST00000626620 TAF7Q15545 349 aaPredicted RBP13.86□□□□□ -0.19
KCNMA1-225ENST00000626620 ATG3Q9NT62 314 aa13.86□□□□□ -0.19
KCNMA1-225ENST00000626620 SALL2Q9Y467 1007 aaPredicted RBP13.86□□□□□ -0.19
KCNMA1-225ENST00000626620 DUSP27Q5VZP5 1158 aa13.85□□□□□ -0.19
KCNMA1-225ENST00000626620 SLC4A9Q96Q91 983 aa13.85□□□□□ -0.19
KCNMA1-225ENST00000626620 MBIPQ9NS73 344 aa13.85□□□□□ -0.19
KCNMA1-225ENST00000626620 RTF1Q92541 710 aaKnown RBP13.85□□□□□ -0.19
KCNMA1-225ENST00000626620 ACSBG1Q96GR2 724 aa13.85□□□□□ -0.19
KCNMA1-225ENST00000626620 ANO8Q9HCE9 1232 aaPredicted RBP13.84□□□□□ -0.19
KCNMA1-225ENST00000626620 MIS18AQ9NYP9 233 aa13.84□□□□□ -0.19
KCNMA1-225ENST00000626620 A0A0G2JS52 829 aa13.84□□□□□ -0.19
KCNMA1-225ENST00000626620 MYT1Q01538 1121 aa13.84□□□□□ -0.19
KCNMA1-225ENST00000626620 FANCIQ9NVI1 1328 aa13.83□□□□□ -0.19
KCNMA1-225ENST00000626620 ASAP1Q9ULH1 1129 aa13.83□□□□□ -0.2
KCNMA1-225ENST00000626620 UTRNP46939 3433 aa13.83□□□□□ -0.2
KCNMA1-225ENST00000626620 CABP4P57796 275 aa13.83□□□□□ -0.2
KCNMA1-225ENST00000626620 GOLGA2Q08379 1002 aa13.83□□□□□ -0.2
KCNMA1-225ENST00000626620 MYH14Q7Z406 1995 aaKnown RBP13.83□□□□□ -0.2
KCNMA1-225ENST00000626620 EIF4A1P60842 406 aaKnown RBP13.83□□□□□ -0.2
KCNMA1-225ENST00000626620 SGIP1Q9BQI5 828 aa13.83□□□□□ -0.2
KCNMA1-225ENST00000626620 ZNF790Q6PG37 636 aa13.82□□□□□ -0.2
KCNMA1-225ENST00000626620 TMOD3Q9NYL9 352 aa13.82□□□□□ -0.2
KCNMA1-225ENST00000626620 BTBD11A6QL63 1104 aa13.81□□□□□ -0.2
KCNMA1-225ENST00000626620 GNAI1P63096 354 aa13.81□□□□□ -0.2
KCNMA1-225ENST00000626620 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
KCNMA1-225ENST00000626620 TSR2Q969E8 191 aaKnown RBP13.81□□□□□ -0.2
KCNMA1-225ENST00000626620 SUPT16HQ9Y5B9 1047 aaKnown RBP13.81□□□□□ -0.2
KCNMA1-225ENST00000626620 E9PSI1 815 aa13.81□□□□□ -0.2
KCNMA1-225ENST00000626620 CALD1Q05682 793 aaKnown RBP13.8□□□□□ -0.2
KCNMA1-225ENST00000626620 TEFQ10587 303 aa13.8□□□□□ -0.2
KCNMA1-225ENST00000626620 PTGER2P43116 358 aa13.8□□□□□ -0.2
KCNMA1-225ENST00000626620 KAT6BQ8WYB5 2073 aa13.79□□□□□ -0.2
KCNMA1-225ENST00000626620 KRT24Q2M2I5 525 aa13.79□□□□□ -0.2
KCNMA1-225ENST00000626620 C8orf58Q8NAV2 365 aa13.79□□□□□ -0.2
KCNMA1-225ENST00000626620 ZNF496Q96IT1 587 aaPredicted RBP13.79□□□□□ -0.2
KCNMA1-225ENST00000626620 PALLDQ8WX93 1383 aa13.79□□□□□ -0.2
KCNMA1-225ENST00000626620 C4BP0C0L5 1744 aa13.79□□□□□ -0.2
KCNMA1-225ENST00000626620 UBR3Q6ZT12 1888 aa13.78□□□□□ -0.2
KCNMA1-225ENST00000626620 TSPYL6Q8N831 410 aa13.78□□□□□ -0.2
KCNMA1-225ENST00000626620 CACNA1FO60840 1977 aa13.78□□□□□ -0.2
KCNMA1-225ENST00000626620 PRAMEF22A3QJZ6 481 aa13.78□□□□□ -0.2
KCNMA1-225ENST00000626620 TSPYL4Q9UJ04 414 aa13.78□□□□□ -0.2
KCNMA1-225ENST00000626620 GIGYF1O75420 1035 aaPredicted RBP13.77□□□□□ -0.2
KCNMA1-225ENST00000626620 VSIG10Q8N0Z9 540 aa13.77□□□□□ -0.21
KCNMA1-225ENST00000626620 PDGFDQ9GZP0 370 aaPredicted RBP13.77□□□□□ -0.21
KCNMA1-225ENST00000626620 LRP10Q7Z4F1 713 aa13.76□□□□□ -0.21
KCNMA1-225ENST00000626620 LRRC4BQ9NT99 713 aa13.76□□□□□ -0.21
KCNMA1-225ENST00000626620 ITPK1Q13572 414 aa13.76□□□□□ -0.21
KCNMA1-225ENST00000626620 VAMP4O75379 141 aa13.76□□□□□ -0.21
KCNMA1-225ENST00000626620 TXNRD1Q16881 649 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms