RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 TMOD3Q9NYL9 352 aa29.75■■■□□ 2.35
CBWD3-213ENST00000618217 SALL2Q9Y467 1007 aaPredicted RBP29.75■■■□□ 2.35
CBWD3-213ENST00000618217 TNS1Q9HBL0 1735 aaKnown RBP29.74■■■□□ 2.35
CBWD3-213ENST00000618217 TEFQ10587 303 aa29.74■■■□□ 2.35
CBWD3-213ENST00000618217 ZNF521Q96K83 1311 aa29.72■■■□□ 2.35
CBWD3-213ENST00000618217 TAF7Q15545 349 aaPredicted RBP29.7■■■□□ 2.34
CBWD3-213ENST00000618217 HNRNPUQ00839 825 aaKnown RBP eCLIP29.68■■■□□ 2.34
CBWD3-213ENST00000618217 PAPPAQ13219 1627 aa29.68■■■□□ 2.34
CBWD3-213ENST00000618217 ASAP1Q9ULH1 1129 aa29.67■■■□□ 2.34
CBWD3-213ENST00000618217 WDR63Q8IWG1 891 aa29.67■■■□□ 2.34
CBWD3-213ENST00000618217 ATG3Q9NT62 314 aa29.67■■■□□ 2.34
CBWD3-213ENST00000618217 KDM3BQ7LBC6 1761 aa29.65■■■□□ 2.34
CBWD3-213ENST00000618217 ZNF853P0CG23 659 aa29.65■■■□□ 2.34
CBWD3-213ENST00000618217 CALD1Q05682 793 aaKnown RBP29.65■■■□□ 2.34
CBWD3-213ENST00000618217 CCDC125Q86Z20 511 aa29.64■■■□□ 2.34
CBWD3-213ENST00000618217 BTBD11A6QL63 1104 aa29.63■■■□□ 2.33
CBWD3-213ENST00000618217 CHL1O00533 1208 aa29.63■■■□□ 2.33
CBWD3-213ENST00000618217 SLC39A6Q13433 755 aa29.63■■■□□ 2.33
CBWD3-213ENST00000618217 UPF1Q92900 1129 aaKnown RBP eCLIP29.63■■■□□ 2.33
CBWD3-213ENST00000618217 BABAM1Q9NWV8 329 aa29.63■■■□□ 2.33
CBWD3-213ENST00000618217 MIS18AQ9NYP9 233 aa29.63■■■□□ 2.33
CBWD3-213ENST00000618217 IL16Q14005 1332 aa29.63■■■□□ 2.33
CBWD3-213ENST00000618217 UBR2Q8IWV8 1755 aa29.63■■■□□ 2.33
CBWD3-213ENST00000618217 CFAP44Q96MT7 982 aa29.63■■■□□ 2.33
CBWD3-213ENST00000618217 APBA3O96018 575 aa29.62■■■□□ 2.33
CBWD3-213ENST00000618217 LY75O60449 1722 aa29.62■■■□□ 2.33
CBWD3-213ENST00000618217 KCNQ3O43525 872 aa29.61■■■□□ 2.33
CBWD3-213ENST00000618217 ZNF790Q6PG37 636 aa29.61■■■□□ 2.33
CBWD3-213ENST00000618217 IFT57Q9NWB7 429 aa29.61■■■□□ 2.33
CBWD3-213ENST00000618217 PLSCR1O15162 318 aa29.6■■■□□ 2.33
CBWD3-213ENST00000618217 SMARCC1Q92922 1105 aaPredicted RBP29.6■■■□□ 2.33
CBWD3-213ENST00000618217 SPINK5Q9NQ38 1064 aaPredicted RBP29.6■■■□□ 2.33
CBWD3-213ENST00000618217 RGPD3A6NKT7 1758 aaPredicted RBP29.59■■■□□ 2.33
CBWD3-213ENST00000618217 RGPD4Q7Z3J3 1758 aa29.59■■■□□ 2.33
CBWD3-213ENST00000618217 KCPQ6ZWJ8 1503 aa29.59■■■□□ 2.33
CBWD3-213ENST00000618217 PALLDQ8WX93 1383 aa29.59■■■□□ 2.33
CBWD3-213ENST00000618217 GNAI1P63096 354 aa29.59■■■□□ 2.33
CBWD3-213ENST00000618217 LAS1LQ9Y4W2 734 aaKnown RBP29.57■■■□□ 2.32
CBWD3-213ENST00000618217 ZBED9Q6R2W3 1325 aa29.57■■■□□ 2.32
CBWD3-213ENST00000618217 MBIPQ9NS73 344 aa29.56■■■□□ 2.32
CBWD3-213ENST00000618217 TSPYL4Q9UJ04 414 aa29.56■■■□□ 2.32
CBWD3-213ENST00000618217 SF3B2Q13435 895 aaKnown RBP29.56■■■□□ 2.32
CBWD3-213ENST00000618217 GOLGA2Q08379 1002 aa29.55■■■□□ 2.32
CBWD3-213ENST00000618217 ZNF831Q5JPB2 1677 aa29.55■■■□□ 2.32
CBWD3-213ENST00000618217 PROM2Q8N271 834 aa29.54■■■□□ 2.32
CBWD3-213ENST00000618217 ZNF496Q96IT1 587 aaPredicted RBP29.54■■■□□ 2.32
CBWD3-213ENST00000618217 SLC4A9Q96Q91 983 aa29.54■■■□□ 2.32
CBWD3-213ENST00000618217 PTCD1O75127 700 aaKnown RBP29.53■■■□□ 2.32
CBWD3-213ENST00000618217 TTC5Q8N0Z6 440 aa29.53■■■□□ 2.32
CBWD3-213ENST00000618217 CAMKK2Q96RR4 588 aa29.53■■■□□ 2.32
CBWD3-213ENST00000618217 DEFB132Q7Z7B7 95 aa29.53■■■□□ 2.32
CBWD3-213ENST00000618217 HEG1Q9ULI3 1381 aa29.52■■■□□ 2.32
CBWD3-213ENST00000618217 LOC102724428A0A0B4J2F2 783 aa29.52■■■□□ 2.32
CBWD3-213ENST00000618217 BAG6P46379 1132 aa29.52■■■□□ 2.32
CBWD3-213ENST00000618217 SIK1P57059 783 aa29.52■■■□□ 2.32
CBWD3-213ENST00000618217 EIF4A1P60842 406 aaKnown RBP29.52■■■□□ 2.32
CBWD3-213ENST00000618217 EN1Q05925 392 aaPredicted RBP29.52■■■□□ 2.32
CBWD3-213ENST00000618217 CDCA7LQ96GN5 454 aa29.52■■■□□ 2.32
CBWD3-213ENST00000618217 SLFN5Q08AF3 891 aa29.51■■■□□ 2.31
CBWD3-213ENST00000618217 TSR2Q969E8 191 aaKnown RBP29.51■■■□□ 2.31
CBWD3-213ENST00000618217 CICQ96RK0 1608 aaPredicted RBP29.49■■■□□ 2.31
CBWD3-213ENST00000618217 TRMT2AQ8IZ69 625 aaKnown RBP29.49■■■□□ 2.31
CBWD3-213ENST00000618217 FMNL2Q96PY5 1086 aa29.49■■■□□ 2.31
CBWD3-213ENST00000618217 RBM42Q9BTD8 480 aaKnown RBP29.49■■■□□ 2.31
CBWD3-213ENST00000618217 TXNRD1Q16881 649 aa29.49■■■□□ 2.31
CBWD3-213ENST00000618217 FANCIQ9NVI1 1328 aa29.48■■■□□ 2.31
CBWD3-213ENST00000618217 E9PSI1 815 aa29.48■■■□□ 2.31
CBWD3-213ENST00000618217 VSIG10Q8N0Z9 540 aa29.48■■■□□ 2.31
CBWD3-213ENST00000618217 LRRC4BQ9NT99 713 aa29.48■■■□□ 2.31
CBWD3-213ENST00000618217 TJP1Q07157 1748 aa29.47■■■□□ 2.31
CBWD3-213ENST00000618217 EZH2Q15910 746 aaKnown RBP29.47■■■□□ 2.31
CBWD3-213ENST00000618217 YTHDC1Q96MU7 727 aaKnown RBP29.47■■■□□ 2.31
CBWD3-213ENST00000618217 MYH16Q9H6N6 1097 aa29.47■■■□□ 2.31
CBWD3-213ENST00000618217 TAF1LQ8IZX4 1826 aa29.47■■■□□ 2.31
CBWD3-213ENST00000618217 KCNQ4P56696 695 aa29.46■■■□□ 2.31
CBWD3-213ENST00000618217 SLC27A3Q5K4L6 730 aa29.46■■■□□ 2.31
CBWD3-213ENST00000618217 RREB1Q92766 1687 aa29.46■■■□□ 2.31
CBWD3-213ENST00000618217 ITPK1Q13572 414 aa29.45■■■□□ 2.31
CBWD3-213ENST00000618217 CCNL1Q9UK58 526 aaPredicted RBP29.45■■■□□ 2.31
CBWD3-213ENST00000618217 KRT24Q2M2I5 525 aa29.45■■■□□ 2.3
CBWD3-213ENST00000618217 C5P01031 1676 aa29.44■■■□□ 2.3
CBWD3-213ENST00000618217 GIGYF1O75420 1035 aaPredicted RBP29.44■■■□□ 2.3
CBWD3-213ENST00000618217 ATP6V1AP38606 617 aa29.44■■■□□ 2.3
CBWD3-213ENST00000618217 COL5A3P25940 1745 aaPredicted RBP29.43■■■□□ 2.3
CBWD3-213ENST00000618217 PRAMEF22A3QJZ6 481 aa29.42■■■□□ 2.3
CBWD3-213ENST00000618217 SNRPA1P09661 255 aaKnown RBP29.42■■■□□ 2.3
CBWD3-213ENST00000618217 DUSP27Q5VZP5 1158 aa29.42■■■□□ 2.3
CBWD3-213ENST00000618217 C8orf58Q8NAV2 365 aa29.42■■■□□ 2.3
CBWD3-213ENST00000618217 DNAJC10Q8IXB1 793 aa29.41■■■□□ 2.3
CBWD3-213ENST00000618217 NUP188Q5SRE5 1749 aa29.4■■■□□ 2.3
CBWD3-213ENST00000618217 LINC00116Q8NCU8 138 aa29.38■■■□□ 2.29
CBWD3-213ENST00000618217 TEX13AQ9BXU3 409 aaPredicted RBP29.38■■■□□ 2.29
CBWD3-213ENST00000618217 USP16Q9Y5T5 823 aa29.38■■■□□ 2.29
CBWD3-213ENST00000618217 LAMB4A4D0S4 1761 aa29.38■■■□□ 2.29
CBWD3-213ENST00000618217 SOCS7O14512 581 aa29.38■■■□□ 2.29
CBWD3-213ENST00000618217 EXOSC9Q06265 439 aaKnown RBP29.38■■■□□ 2.29
CBWD3-213ENST00000618217 TSPYL6Q8N831 410 aa29.38■■■□□ 2.29
CBWD3-213ENST00000618217 MYH14Q7Z406 1995 aaKnown RBP29.37■■■□□ 2.29
CBWD3-213ENST00000618217 CYP19A1P11511 503 aaPredicted RBP29.37■■■□□ 2.29
CBWD3-213ENST00000618217 HOXB7P09629 217 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms