RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 TOM1O60784 492 aa9.84□□□□□ -0.83
SMAD4-210ENST00000590061 MORC1Q86VD1 984 aa9.84□□□□□ -0.83
SMAD4-210ENST00000590061 USP32Q8NFA0 1604 aa9.84□□□□□ -0.83
SMAD4-210ENST00000590061 NSD3Q9BZ95 1437 aa9.83□□□□□ -0.84
SMAD4-210ENST00000590061 IFFO2Q5TF58 517 aa9.83□□□□□ -0.84
SMAD4-210ENST00000590061 COG3Q96JB2 828 aa9.83□□□□□ -0.84
SMAD4-210ENST00000590061 CFAP53Q96M91 514 aa9.83□□□□□ -0.84
SMAD4-210ENST00000590061 SLAIN2Q9P270 581 aa9.83□□□□□ -0.84
SMAD4-210ENST00000590061 PNMA3Q9UL41 463 aa9.83□□□□□ -0.84
SMAD4-210ENST00000590061 A0A1W2PP64 1363 aa9.83□□□□□ -0.84
SMAD4-210ENST00000590061 KIF1AQ12756 1690 aa9.83□□□□□ -0.84
SMAD4-210ENST00000590061 NUDT18Q6ZVK8 323 aa9.82□□□□□ -0.84
SMAD4-210ENST00000590061 CARD14Q9BXL6 1004 aa9.82□□□□□ -0.84
SMAD4-210ENST00000590061 WBP1LQ9NX94 342 aa9.82□□□□□ -0.84
SMAD4-210ENST00000590061 PARD3Q8TEW0 1356 aa9.82□□□□□ -0.84
SMAD4-210ENST00000590061 NALCNQ8IZF0 1738 aa9.82□□□□□ -0.84
SMAD4-210ENST00000590061 MYOM1P52179 1685 aa9.81□□□□□ -0.84
SMAD4-210ENST00000590061 C1orf167Q5SNV9 1468 aa9.81□□□□□ -0.84
SMAD4-210ENST00000590061 PRKCSHP14314 528 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-210ENST00000590061 LRCH3Q96II8 777 aa9.81□□□□□ -0.84
SMAD4-210ENST00000590061 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-210ENST00000590061 USP6P35125 1406 aa9.81□□□□□ -0.84
SMAD4-210ENST00000590061 PRR36Q9H6K5 1346 aa9.81□□□□□ -0.84
SMAD4-210ENST00000590061 TOPAZ1Q8N9V7 1692 aa9.8□□□□□ -0.84
SMAD4-210ENST00000590061 SAMD7Q7Z3H4 446 aa9.8□□□□□ -0.84
SMAD4-210ENST00000590061 KCNH5Q8NCM2 988 aa9.8□□□□□ -0.84
SMAD4-210ENST00000590061 PNNQ9H307 717 aaKnown RBP9.8□□□□□ -0.84
SMAD4-210ENST00000590061 TTC21BQ7Z4L5 1316 aa9.8□□□□□ -0.84
SMAD4-210ENST00000590061 SBNO1A3KN83 1393 aa9.79□□□□□ -0.84
SMAD4-210ENST00000590061 FYB1O15117 783 aa9.79□□□□□ -0.84
SMAD4-210ENST00000590061 ITGBL1O95965 494 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-210ENST00000590061 CC2D1BQ5T0F9 858 aaKnown RBP9.79□□□□□ -0.84
SMAD4-210ENST00000590061 NYAP1Q6ZVC0 841 aa9.79□□□□□ -0.84
SMAD4-210ENST00000590061 HOMEZQ8IX15 550 aa9.79□□□□□ -0.84
SMAD4-210ENST00000590061 VSIG10Q8N0Z9 540 aa9.79□□□□□ -0.84
SMAD4-210ENST00000590061 EYA1Q99502 592 aa9.79□□□□□ -0.84
SMAD4-210ENST00000590061 TSR3Q9UJK0 312 aaKnown RBP9.79□□□□□ -0.84
SMAD4-210ENST00000590061 HPS5Q9UPZ3 1129 aa9.79□□□□□ -0.84
SMAD4-210ENST00000590061 MST1RQ04912 1400 aa9.79□□□□□ -0.84
SMAD4-210ENST00000590061 AKAP12Q02952 1782 aa9.78□□□□□ -0.84
SMAD4-210ENST00000590061 ARHGEF10O15013 1369 aa9.78□□□□□ -0.84
SMAD4-210ENST00000590061 KIF24Q5T7B8 1368 aa9.78□□□□□ -0.84
SMAD4-210ENST00000590061 USP31Q70CQ4 1352 aa9.78□□□□□ -0.84
SMAD4-210ENST00000590061 NUTM2FA1L443 756 aa9.78□□□□□ -0.84
SMAD4-210ENST00000590061 GPR37O15354 613 aa9.78□□□□□ -0.84
SMAD4-210ENST00000590061 ABTB2Q8N961 1025 aa9.78□□□□□ -0.84
SMAD4-210ENST00000590061 PMFBP1Q8TBY8 1022 aa9.78□□□□□ -0.84
SMAD4-210ENST00000590061 MRS2Q9HD23 443 aa9.78□□□□□ -0.84
SMAD4-210ENST00000590061 NUDCQ9Y266 331 aa9.78□□□□□ -0.84
SMAD4-210ENST00000590061 CD163L1Q9NR16 1453 aa9.78□□□□□ -0.84
SMAD4-210ENST00000590061 STRCP1A6NGW2 1772 aa9.78□□□□□ -0.84
SMAD4-210ENST00000590061 INSRP06213 1382 aa9.77□□□□□ -0.84
SMAD4-210ENST00000590061 AATKQ6ZMQ8 1374 aa9.77□□□□□ -0.84
SMAD4-210ENST00000590061 MON2Q7Z3U7 1717 aa9.77□□□□□ -0.85
SMAD4-210ENST00000590061 HSPA1LP34931 641 aa9.77□□□□□ -0.85
SMAD4-210ENST00000590061 PIP4K2BP78356 416 aa9.77□□□□□ -0.85
SMAD4-210ENST00000590061 KRT28Q7Z3Y7 464 aa9.77□□□□□ -0.85
SMAD4-210ENST00000590061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMAD4-210ENST00000590061 NGEFQ8N5V2 710 aa9.77□□□□□ -0.85
SMAD4-210ENST00000590061 SSH2Q76I76 1423 aa9.76□□□□□ -0.85
SMAD4-210ENST00000590061 FOXO3O43524 673 aa9.76□□□□□ -0.85
SMAD4-210ENST00000590061 PPP2R1AP30153 589 aa9.76□□□□□ -0.85
SMAD4-210ENST00000590061 WDR43Q15061 677 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMAD4-210ENST00000590061 RBM26Q5T8P6 1007 aaKnown RBP9.75□□□□□ -0.85
SMAD4-210ENST00000590061 LRRC59Q96AG4 307 aaKnown RBP9.75□□□□□ -0.85
SMAD4-210ENST00000590061 ORAI2Q96SN7 254 aa9.75□□□□□ -0.85
SMAD4-210ENST00000590061 ADGRG1Q9Y653 693 aa9.75□□□□□ -0.85
SMAD4-210ENST00000590061 FCHSD2O94868 740 aa9.74□□□□□ -0.85
SMAD4-210ENST00000590061 NEFMP07197 916 aa9.74□□□□□ -0.85
SMAD4-210ENST00000590061 BRINP3Q76B58 766 aa9.74□□□□□ -0.85
SMAD4-210ENST00000590061 GGNBP2Q9H3C7 697 aa9.74□□□□□ -0.85
SMAD4-210ENST00000590061 KIF20BQ96Q89 1820 aa9.74□□□□□ -0.85
SMAD4-210ENST00000590061 MED1Q15648 1581 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-210ENST00000590061 ANKRD26Q9UPS8 1709 aa9.73□□□□□ -0.85
SMAD4-210ENST00000590061 RGPD8O14715 1765 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-210ENST00000590061 XIRP1Q702N8 1843 aaKnown RBP9.72□□□□□ -0.85
SMAD4-210ENST00000590061 A0A0G2JS52 829 aa9.72□□□□□ -0.85
SMAD4-210ENST00000590061 SWT1Q5T5J6 900 aaKnown RBP9.72□□□□□ -0.85
SMAD4-210ENST00000590061 NME9Q86XW9 330 aa9.72□□□□□ -0.85
SMAD4-210ENST00000590061 SOS2Q07890 1332 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-210ENST00000590061 MTHFSP49914 203 aa9.71□□□□□ -0.86
SMAD4-210ENST00000590061 SPATA31A3Q5VYP0 1347 aa9.71□□□□□ -0.86
SMAD4-210ENST00000590061 RTL1A6NKG5 1358 aa9.71□□□□□ -0.86
SMAD4-210ENST00000590061 OVOS2A0A0J9YW53 1432 aa9.71□□□□□ -0.86
SMAD4-210ENST00000590061 TNS3Q68CZ2 1445 aa9.71□□□□□ -0.86
SMAD4-210ENST00000590061 OVOS2Q6IE36 1432 aa9.71□□□□□ -0.86
SMAD4-210ENST00000590061 DIAPH1O60610 1272 aaKnown RBP9.7□□□□□ -0.86
SMAD4-210ENST00000590061 AMPHP49418 695 aa9.7□□□□□ -0.86
SMAD4-210ENST00000590061 CNGB1Q14028 1251 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-210ENST00000590061 LMOD2Q6P5Q4 547 aa9.7□□□□□ -0.86
SMAD4-210ENST00000590061 PNISRQ8TF01 805 aaKnown RBP9.7□□□□□ -0.86
SMAD4-210ENST00000590061 NRKQ7Z2Y5 1582 aa9.7□□□□□ -0.86
SMAD4-210ENST00000590061 USP19O94966 1318 aa9.69□□□□□ -0.86
SMAD4-210ENST00000590061 PPP4CP60510 307 aa9.69□□□□□ -0.86
SMAD4-210ENST00000590061 HIC1Q14526 733 aa9.69□□□□□ -0.86
SMAD4-210ENST00000590061 FAM161AQ3B820 660 aa9.69□□□□□ -0.86
SMAD4-210ENST00000590061 SMYD5Q6GMV2 418 aa9.69□□□□□ -0.86
SMAD4-210ENST00000590061 USP54Q70EL1 1684 aa9.69□□□□□ -0.86
SMAD4-210ENST00000590061 PNPLA6Q8IY17 1366 aa9.69□□□□□ -0.86
SMAD4-210ENST00000590061 CDK12Q9NYV4 1490 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms