RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 SLC19A1P41440 591 aa12.27□□□□□ -0.45
DNMT1-219ENST00000589349 CCDC24Q8N4L8 307 aa12.27□□□□□ -0.45
DNMT1-219ENST00000589349 EFCAB6Q5THR3 1501 aa12.27□□□□□ -0.45
DNMT1-219ENST00000589349 LMTK2Q8IWU2 1503 aa12.27□□□□□ -0.45
DNMT1-219ENST00000589349 PIK3C2BO00750 1634 aa12.26□□□□□ -0.45
DNMT1-219ENST00000589349 IQGAP1P46940 1657 aa12.26□□□□□ -0.45
DNMT1-219ENST00000589349 UBR1Q8IWV7 1749 aa12.26□□□□□ -0.45
DNMT1-219ENST00000589349 ZBTB24O43167 697 aaPredicted RBP12.26□□□□□ -0.45
DNMT1-219ENST00000589349 CCNYL3P0C7X3 344 aa12.26□□□□□ -0.45
DNMT1-219ENST00000589349 RPIAP49247 311 aa12.25□□□□□ -0.45
DNMT1-219ENST00000589349 PLA2G2CQ5R387 149 aa12.25□□□□□ -0.45
DNMT1-219ENST00000589349 LYPD8Q6UX82 237 aa12.25□□□□□ -0.45
DNMT1-219ENST00000589349 C14orf37Q86TY3 774 aa12.25□□□□□ -0.45
DNMT1-219ENST00000589349 IQSEC2Q5JU85 1478 aa12.25□□□□□ -0.45
DNMT1-219ENST00000589349 CPS1P31327 1500 aa12.25□□□□□ -0.45
DNMT1-219ENST00000589349 MED14O60244 1454 aa12.24□□□□□ -0.45
DNMT1-219ENST00000589349 PROSER2Q86WR7 435 aaPredicted RBP12.24□□□□□ -0.45
DNMT1-219ENST00000589349 VWDEQ8N2E2 1590 aa12.24□□□□□ -0.45
DNMT1-219ENST00000589349 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.24□□□□□ -0.45
DNMT1-219ENST00000589349 RPRD2Q5VT52 1461 aaKnown RBP12.23□□□□□ -0.45
DNMT1-219ENST00000589349 NOS1P29475 1434 aa12.23□□□□□ -0.45
DNMT1-219ENST00000589349 RRBP1Q9P2E9 1410 aaKnown RBP12.23□□□□□ -0.45
DNMT1-219ENST00000589349 TET3O43151 1660 aa12.22□□□□□ -0.45
DNMT1-219ENST00000589349 SYNMO15061 1565 aa12.22□□□□□ -0.45
DNMT1-219ENST00000589349 LIAT1Q6ZQX7 453 aa12.22□□□□□ -0.45
DNMT1-219ENST00000589349 RIMS2Q9UQ26 1411 aa12.21□□□□□ -0.45
DNMT1-219ENST00000589349 HSPA1LP34931 641 aa12.21□□□□□ -0.45
DNMT1-219ENST00000589349 RFC5P40937 340 aa12.21□□□□□ -0.45
DNMT1-219ENST00000589349 EVA1BQ9NVM1 165 aa12.21□□□□□ -0.45
DNMT1-219ENST00000589349 UNC13BO14795 1591 aa12.21□□□□□ -0.46
DNMT1-219ENST00000589349 ADGRB3O60242 1522 aa12.21□□□□□ -0.46
DNMT1-219ENST00000589349 SLIT1O75093 1534 aa12.21□□□□□ -0.46
DNMT1-219ENST00000589349 CD2BP2O95400 341 aaKnown RBP12.2□□□□□ -0.46
DNMT1-219ENST00000589349 KCNA6P17658 529 aa12.2□□□□□ -0.46
DNMT1-219ENST00000589349 EMID1Q96A84 441 aaPredicted RBP12.2□□□□□ -0.46
DNMT1-219ENST00000589349 ARHGAP23Q9P227 1491 aa12.2□□□□□ -0.46
DNMT1-219ENST00000589349 KCNH2Q12809 1159 aa12.19□□□□□ -0.46
DNMT1-219ENST00000589349 TMEM259Q4ZIN3 620 aa12.19□□□□□ -0.46
DNMT1-219ENST00000589349 SPRYD7Q5W111 196 aa12.19□□□□□ -0.46
DNMT1-219ENST00000589349 GCC2Q8IWJ2 1684 aa12.19□□□□□ -0.46
DNMT1-219ENST00000589349 AP1G2O75843 785 aa12.18□□□□□ -0.46
DNMT1-219ENST00000589349 CTHP32929 405 aa12.18□□□□□ -0.46
DNMT1-219ENST00000589349 NAIPQ13075 1403 aa12.18□□□□□ -0.46
DNMT1-219ENST00000589349 PER1O15534 1290 aaPredicted RBP12.17□□□□□ -0.46
DNMT1-219ENST00000589349 TRIM32Q13049 653 aa12.17□□□□□ -0.46
DNMT1-219ENST00000589349 TMEM132AQ24JP5 1023 aa12.17□□□□□ -0.46
DNMT1-219ENST00000589349 ZNF598Q86UK7 904 aaKnown RBP12.17□□□□□ -0.46
DNMT1-219ENST00000589349 IQGAP3Q86VI3 1631 aa12.17□□□□□ -0.46
DNMT1-219ENST00000589349 LRRC7Q96NW7 1537 aa12.16□□□□□ -0.46
DNMT1-219ENST00000589349 E9PCH4 1651 aa12.16□□□□□ -0.46
DNMT1-219ENST00000589349 CTDSPL2Q05D32 466 aa12.16□□□□□ -0.46
DNMT1-219ENST00000589349 TMEM94Q12767 1356 aa12.16□□□□□ -0.46
DNMT1-219ENST00000589349 F12P00748 615 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-219ENST00000589349 ZNF697Q5TEC3 545 aa12.15□□□□□ -0.46
DNMT1-219ENST00000589349 PLEKHG1Q9ULL1 1385 aa12.15□□□□□ -0.46
DNMT1-219ENST00000589349 PTCRAQ6ISU1 281 aaPredicted RBP12.14□□□□□ -0.47
DNMT1-219ENST00000589349 UNC93B1Q9H1C4 597 aa12.14□□□□□ -0.47
DNMT1-219ENST00000589349 TBX22Q9Y458 520 aa12.14□□□□□ -0.47
DNMT1-219ENST00000589349 HFM1A2PYH4 1435 aa12.13□□□□□ -0.47
DNMT1-219ENST00000589349 MAP10Q9P2G4 905 aa12.13□□□□□ -0.47
DNMT1-219ENST00000589349 MSH6P52701 1360 aa12.13□□□□□ -0.47
DNMT1-219ENST00000589349 KDM5AP29375 1690 aaKnown RBP12.13□□□□□ -0.47
DNMT1-219ENST00000589349 TMEM131LA2VDJ0 1609 aa12.12□□□□□ -0.47
DNMT1-219ENST00000589349 MYO5BQ9ULV0 1848 aa12.12□□□□□ -0.47
DNMT1-219ENST00000589349 USP17L8P0C7I0 530 aa12.12□□□□□ -0.47
DNMT1-219ENST00000589349 RGL3Q3MIN7 710 aa12.12□□□□□ -0.47
DNMT1-219ENST00000589349 AMOTL2Q9Y2J4 779 aa12.12□□□□□ -0.47
DNMT1-219ENST00000589349 STRCP1A6NGW2 1772 aa12.12□□□□□ -0.47
DNMT1-219ENST00000589349 ZFYVE9O95405 1425 aa12.11□□□□□ -0.47
DNMT1-219ENST00000589349 ATF3P18847 181 aa12.11□□□□□ -0.47
DNMT1-219ENST00000589349 ARMC2Q8NEN0 867 aa12.11□□□□□ -0.47
DNMT1-219ENST00000589349 MPHOSPH9Q99550 1183 aa12.11□□□□□ -0.47
DNMT1-219ENST00000589349 WNT7BP56706 349 aa12.1□□□□□ -0.47
DNMT1-219ENST00000589349 BANK1Q8NDB2 785 aa12.1□□□□□ -0.47
DNMT1-219ENST00000589349 LRRN4Q8WUT4 740 aa12.1□□□□□ -0.47
DNMT1-219ENST00000589349 SPHKAPQ2M3C7 1700 aa12.08□□□□□ -0.47
DNMT1-219ENST00000589349 IRX2Q9BZI1 471 aaPredicted RBP12.08□□□□□ -0.48
DNMT1-219ENST00000589349 SLAIN2Q9P270 581 aa12.08□□□□□ -0.48
DNMT1-219ENST00000589349 PNMA1Q8ND90 353 aa12.06□□□□□ -0.48
DNMT1-219ENST00000589349 CCDC144AA2RUR9 1427 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 SETD5Q9C0A6 1442 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 WNT7AO00755 349 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 PRR20EP86478 221 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 PRR20CP86479 221 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 PRR20DP86480 221 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 PRR20BP86481 221 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 PRR20AP86496 221 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 LAPTM4AQ15012 233 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 NBPF14Q5TI25 921 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 ZNF511Q8NB15 262 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 BAP1Q92560 729 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 C19orf44Q9H6X5 657 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 PDZRN3Q9UPQ7 1066 aa12.05□□□□□ -0.48
DNMT1-219ENST00000589349 NKTRP30414 1462 aaKnown RBP12.05□□□□□ -0.48
DNMT1-219ENST00000589349 CLTCL1P53675 1640 aa12.04□□□□□ -0.48
DNMT1-219ENST00000589349 ADAMTS13Q76LX8 1427 aa12.04□□□□□ -0.48
DNMT1-219ENST00000589349 APBB1O00213 710 aa12.04□□□□□ -0.48
DNMT1-219ENST00000589349 FOXC1Q12948 553 aa12.04□□□□□ -0.48
DNMT1-219ENST00000589349 LINC01559Q495D7 138 aa12.04□□□□□ -0.48
DNMT1-219ENST00000589349 GPKOWQ92917 476 aaPredicted RBP eCLIP12.04□□□□□ -0.481e-7■□□□□ 8.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms