RNA–Protein interactions for RNA: ENST00000581339.1

RIOK3-206, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-206ENST00000581339 Q6ZNB5 142 aa10.89□□□□□ -0.67
RIOK3-206ENST00000581339 CRIPAKQ8N1N5 446 aa10.89□□□□□ -0.67
RIOK3-206ENST00000581339 CDCA7Q9BWT1 371 aaPredicted RBP10.89□□□□□ -0.67
RIOK3-206ENST00000581339 ESF1Q9H501 851 aaKnown RBP10.89□□□□□ -0.67
RIOK3-206ENST00000581339 C1orf115Q9H7X2 142 aa10.89□□□□□ -0.67
RIOK3-206ENST00000581339 PALM3A6NDB9 673 aaPredicted RBP10.88□□□□□ -0.67
RIOK3-206ENST00000581339 AXIN1O15169 862 aa10.88□□□□□ -0.67
RIOK3-206ENST00000581339 LILRA1O75019 489 aa10.88□□□□□ -0.67
RIOK3-206ENST00000581339 MYCP01106 439 aaPredicted RBP10.88□□□□□ -0.67
RIOK3-206ENST00000581339 ERVK-9P63128 1117 aa10.88□□□□□ -0.67
RIOK3-206ENST00000581339 CC2D2BQ6DHV5 1058 aa10.88□□□□□ -0.67
RIOK3-206ENST00000581339 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
RIOK3-206ENST00000581339 TFIP11Q9UBB9 837 aaKnown RBP10.88□□□□□ -0.67
RIOK3-206ENST00000581339 SERPINA10Q9UK55 444 aa10.88□□□□□ -0.67
RIOK3-206ENST00000581339 LZTS3O60299 673 aaPredicted RBP10.87□□□□□ -0.67
RIOK3-206ENST00000581339 SCTRP47872 440 aa10.87□□□□□ -0.67
RIOK3-206ENST00000581339 GOLGA3Q08378 1498 aa10.87□□□□□ -0.67
RIOK3-206ENST00000581339 TEX14Q8IWB6 1497 aa10.87□□□□□ -0.67
RIOK3-206ENST00000581339 USP17L3A6NCW0 530 aa10.86□□□□□ -0.67
RIOK3-206ENST00000581339 USP17L4A6NCW7 530 aa10.86□□□□□ -0.67
RIOK3-206ENST00000581339 USP4Q13107 963 aa10.86□□□□□ -0.67
RIOK3-206ENST00000581339 CBLBQ13191 982 aa10.86□□□□□ -0.67
RIOK3-206ENST00000581339 USP17L2Q6R6M4 530 aa10.86□□□□□ -0.67
RIOK3-206ENST00000581339 USP17L1Q7RTZ2 530 aa10.86□□□□□ -0.67
RIOK3-206ENST00000581339 PLEKHM2Q8IWE5 1019 aa10.86□□□□□ -0.67
RIOK3-206ENST00000581339 CCDC82Q8N4S0 544 aa10.86□□□□□ -0.67
RIOK3-206ENST00000581339 SIRT1Q96EB6 747 aa10.86□□□□□ -0.67
RIOK3-206ENST00000581339 MAFBQ9Y5Q3 323 aaPredicted RBP10.86□□□□□ -0.67
RIOK3-206ENST00000581339 CD109Q6YHK3 1445 aa10.85□□□□□ -0.67
RIOK3-206ENST00000581339 ST8SIA5O15466 376 aa10.85□□□□□ -0.67
RIOK3-206ENST00000581339 NCOA4Q13772 614 aa10.85□□□□□ -0.67
RIOK3-206ENST00000581339 EML3Q32P44 896 aa10.85□□□□□ -0.67
RIOK3-206ENST00000581339 Q6ZVU0 165 aa10.85□□□□□ -0.67
RIOK3-206ENST00000581339 DEPDC4Q8N2C3 294 aa10.85□□□□□ -0.67
RIOK3-206ENST00000581339 MEIOBQ8N635 442 aa10.85□□□□□ -0.67
RIOK3-206ENST00000581339 AAASQ9NRG9 546 aa10.85□□□□□ -0.67
RIOK3-206ENST00000581339 MAGI3Q5TCQ9 1506 aa10.84□□□□□ -0.67
RIOK3-206ENST00000581339 ATP10BO94823 1461 aa10.83□□□□□ -0.68
RIOK3-206ENST00000581339 ADD1P35611 737 aaKnown RBP10.83□□□□□ -0.68
RIOK3-206ENST00000581339 ADH1AP07327 375 aa10.82□□□□□ -0.68
RIOK3-206ENST00000581339 LMOD1P29536 600 aaPredicted RBP10.82□□□□□ -0.68
RIOK3-206ENST00000581339 CFAP70Q5T0N1 1121 aa10.82□□□□□ -0.68
RIOK3-206ENST00000581339 NOD1Q9Y239 953 aa10.82□□□□□ -0.68
RIOK3-206ENST00000581339 CFAP43Q8NDM7 1665 aa10.82□□□□□ -0.68
RIOK3-206ENST00000581339 CYP2U1Q7Z449 544 aa10.81□□□□□ -0.68
RIOK3-206ENST00000581339 OSBPL3Q9H4L5 887 aa10.81□□□□□ -0.68
RIOK3-206ENST00000581339 UPP2O95045 317 aa10.8□□□□□ -0.68
RIOK3-206ENST00000581339 BMP1P13497 986 aa10.8□□□□□ -0.68
RIOK3-206ENST00000581339 TSEN34Q9BSV6 310 aaKnown RBP10.8□□□□□ -0.68
RIOK3-206ENST00000581339 SAMD9Q5K651 1589 aa10.79□□□□□ -0.68
RIOK3-206ENST00000581339 ATP5J2-PTCD1G3V325 749 aa10.79□□□□□ -0.68
RIOK3-206ENST00000581339 MRPL14Q6P1L8 145 aaKnown RBP10.79□□□□□ -0.68
RIOK3-206ENST00000581339 TRIM50Q86XT4 487 aa10.79□□□□□ -0.68
RIOK3-206ENST00000581339 AGBL1Q96MI9 1066 aa10.79□□□□□ -0.68
RIOK3-206ENST00000581339 RANGAP1P46060 587 aaPredicted RBP10.78□□□□□ -0.68
RIOK3-206ENST00000581339 RELBQ01201 579 aa10.78□□□□□ -0.68
RIOK3-206ENST00000581339 LINC00528Q8N1L1 170 aa10.78□□□□□ -0.68
RIOK3-206ENST00000581339 ATP13A2Q9NQ11 1180 aa10.78□□□□□ -0.68
RIOK3-206ENST00000581339 MKRN1Q9UHC7 482 aaKnown RBP10.78□□□□□ -0.68
RIOK3-206ENST00000581339 LCE2BO14633 110 aa10.77□□□□□ -0.69
RIOK3-206ENST00000581339 RFX1P22670 979 aa10.77□□□□□ -0.69
RIOK3-206ENST00000581339 GTF2IP78347 998 aa10.77□□□□□ -0.69
RIOK3-206ENST00000581339 SCARF1Q14162 830 aa10.77□□□□□ -0.69
RIOK3-206ENST00000581339 TRIM46Q7Z4K8 759 aa10.77□□□□□ -0.69
RIOK3-206ENST00000581339 HECW2Q9P2P5 1572 aa10.77□□□□□ -0.69
RIOK3-206ENST00000581339 BMP2P12643 396 aa10.76□□□□□ -0.69
RIOK3-206ENST00000581339 PTGIRP43119 386 aa10.76□□□□□ -0.69
RIOK3-206ENST00000581339 C6orf118Q5T5N4 469 aa10.76□□□□□ -0.69
RIOK3-206ENST00000581339 FAM9AQ8IZU1 332 aaPredicted RBP10.76□□□□□ -0.69
RIOK3-206ENST00000581339 DACH1Q9UI36 760 aa10.76□□□□□ -0.69
RIOK3-206ENST00000581339 KIF21BO75037 1637 aa10.76□□□□□ -0.69
RIOK3-206ENST00000581339 ARAP3Q8WWN8 1544 aa10.75□□□□□ -0.69
RIOK3-206ENST00000581339 RAPGEF3O95398 923 aa10.75□□□□□ -0.69
RIOK3-206ENST00000581339 GNRH1P01148 92 aa10.75□□□□□ -0.69
RIOK3-206ENST00000581339 ATP1A2P50993 1020 aa10.75□□□□□ -0.69
RIOK3-206ENST00000581339 PSME1Q06323 249 aa10.75□□□□□ -0.69
RIOK3-206ENST00000581339 KDF1Q8NAX2 398 aaPredicted RBP10.75□□□□□ -0.69
RIOK3-206ENST00000581339 ARID3AQ99856 593 aa10.75□□□□□ -0.69
RIOK3-206ENST00000581339 VRTNQ9H8Y1 702 aa10.75□□□□□ -0.69
RIOK3-206ENST00000581339 ABCA9Q8IUA7 1624 aa10.75□□□□□ -0.69
RIOK3-206ENST00000581339 RAPGEF6Q8TEU7 1601 aa10.75□□□□□ -0.69
RIOK3-206ENST00000581339 FHOD3Q2V2M9 1422 aa10.75□□□□□ -0.69
RIOK3-206ENST00000581339 NUP153P49790 1475 aaKnown RBP10.74□□□□□ -0.69
RIOK3-206ENST00000581339 KANK4Q5T7N3 995 aaPredicted RBP10.74□□□□□ -0.69
RIOK3-206ENST00000581339 PURBQ96QR8 312 aaKnown RBP10.74□□□□□ -0.69
RIOK3-206ENST00000581339 ZNF395Q9H8N7 513 aaPredicted RBP10.74□□□□□ -0.69
RIOK3-206ENST00000581339 PCDHGA11Q9Y5H2 935 aa10.74□□□□□ -0.69
RIOK3-206ENST00000581339 SPINT1O43278 529 aa10.73□□□□□ -0.69
RIOK3-206ENST00000581339 OGFOD1Q8N543 542 aa10.73□□□□□ -0.69
RIOK3-206ENST00000581339 ARHGEF10LQ9HCE6 1279 aa10.73□□□□□ -0.69
RIOK3-206ENST00000581339 DNAAF2Q9NVR5 837 aaKnown RBP10.73□□□□□ -0.69
RIOK3-206ENST00000581339 A0A1W2PRU2 124 aa10.72□□□□□ -0.69
RIOK3-206ENST00000581339 RASA1P20936 1047 aa10.72□□□□□ -0.69
RIOK3-206ENST00000581339 CLDN10P78369 228 aa10.72□□□□□ -0.69
RIOK3-206ENST00000581339 ESCO1Q5FWF5 840 aa10.72□□□□□ -0.69
RIOK3-206ENST00000581339 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.71□□□□□ -0.69
RIOK3-206ENST00000581339 CLN3Q13286 438 aa10.71□□□□□ -0.69
RIOK3-206ENST00000581339 FRMPD1Q5SYB0 1578 aa10.71□□□□□ -0.69
RIOK3-206ENST00000581339 LARP1Q6PKG0 1096 aaKnown RBP10.71□□□□□ -0.69
RIOK3-206ENST00000581339 PBXIP1Q96AQ6 731 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms