RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.14□□□□□ -0.63
PPP4R1-213ENST00000579609 USP35Q9P2H5 1018 aa11.14□□□□□ -0.63
PPP4R1-213ENST00000579609 TNNQ9UQP3 1299 aa11.14□□□□□ -0.63
PPP4R1-213ENST00000579609 CRYBG1Q9Y4K1 1723 aa11.14□□□□□ -0.63
PPP4R1-213ENST00000579609 IBTKQ9P2D0 1353 aaPredicted RBP11.14□□□□□ -0.63
PPP4R1-213ENST00000579609 SIPA1L3O60292 1781 aaPredicted RBP11.13□□□□□ -0.63
PPP4R1-213ENST00000579609 FAM83GA6ND36 823 aa11.13□□□□□ -0.63
PPP4R1-213ENST00000579609 CCT4P50991 539 aaKnown RBP11.13□□□□□ -0.63
PPP4R1-213ENST00000579609 ESCO1Q5FWF5 840 aa11.13□□□□□ -0.63
PPP4R1-213ENST00000579609 DCAF8Q5TAQ9 597 aa11.13□□□□□ -0.63
PPP4R1-213ENST00000579609 ARHGEF25Q86VW2 580 aa11.13□□□□□ -0.63
PPP4R1-213ENST00000579609 FBXO41Q8TF61 875 aa11.13□□□□□ -0.63
PPP4R1-213ENST00000579609 THUMPD2Q9BTF0 503 aaKnown RBP11.13□□□□□ -0.63
PPP4R1-213ENST00000579609 STRCP1A6NGW2 1772 aa11.13□□□□□ -0.63
PPP4R1-213ENST00000579609 TAF7Q15545 349 aaPredicted RBP11.12□□□□□ -0.63
PPP4R1-213ENST00000579609 PAXIP1Q6ZW49 1069 aaPredicted RBP11.12□□□□□ -0.63
PPP4R1-213ENST00000579609 PROSER2Q86WR7 435 aaPredicted RBP11.12□□□□□ -0.63
PPP4R1-213ENST00000579609 TSPYL4Q9UJ04 414 aa11.12□□□□□ -0.63
PPP4R1-213ENST00000579609 COL18A1P39060 1754 aa11.11□□□□□ -0.63
PPP4R1-213ENST00000579609 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
PPP4R1-213ENST00000579609 CCDC30Q5VVM6 783 aa11.11□□□□□ -0.63
PPP4R1-213ENST00000579609 MCM10Q7L590 875 aa11.11□□□□□ -0.63
PPP4R1-213ENST00000579609 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
PPP4R1-213ENST00000579609 STK31Q9BXU1 1019 aa11.11□□□□□ -0.63
PPP4R1-213ENST00000579609 ATP10DQ9P241 1426 aa11.1□□□□□ -0.63
PPP4R1-213ENST00000579609 PARP4Q9UKK3 1724 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-213ENST00000579609 GCP02774 474 aa11.1□□□□□ -0.63
PPP4R1-213ENST00000579609 PLEKHO1Q53GL0 409 aaPredicted RBP11.1□□□□□ -0.63
PPP4R1-213ENST00000579609 BMP2KLQ5H9B9 411 aa11.1□□□□□ -0.63
PPP4R1-213ENST00000579609 AKAP4Q5JQC9 854 aa11.1□□□□□ -0.63
PPP4R1-213ENST00000579609 C14orf37Q86TY3 774 aa11.1□□□□□ -0.63
PPP4R1-213ENST00000579609 CHD1LQ86WJ1 897 aa11.1□□□□□ -0.63
PPP4R1-213ENST00000579609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.1□□□□□ -0.63
PPP4R1-213ENST00000579609 RGPD2P0DJD1 1756 aa11.1□□□□□ -0.63
PPP4R1-213ENST00000579609 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
PPP4R1-213ENST00000579609 HMMRO75330 724 aa11.09□□□□□ -0.63
PPP4R1-213ENST00000579609 DCTN1Q14203 1278 aa11.09□□□□□ -0.63
PPP4R1-213ENST00000579609 BECN1Q14457 450 aa11.09□□□□□ -0.63
PPP4R1-213ENST00000579609 RASEFQ8IZ41 740 aa11.09□□□□□ -0.63
PPP4R1-213ENST00000579609 ANKRD44Q8N8A2 993 aa11.09□□□□□ -0.63
PPP4R1-213ENST00000579609 DAXXQ9UER7 740 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-213ENST00000579609 XIRP1Q702N8 1843 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-213ENST00000579609 PKD1L3Q7Z443 1732 aa11.09□□□□□ -0.63
PPP4R1-213ENST00000579609 TNS3Q68CZ2 1445 aa11.09□□□□□ -0.63
PPP4R1-213ENST00000579609 SCN11AQ9UI33 1791 aa11.08□□□□□ -0.64
PPP4R1-213ENST00000579609 CPDO75976 1380 aa11.08□□□□□ -0.64
PPP4R1-213ENST00000579609 ATF3P18847 181 aa11.08□□□□□ -0.64
PPP4R1-213ENST00000579609 KRT28Q7Z3Y7 464 aa11.08□□□□□ -0.64
PPP4R1-213ENST00000579609 FAM212AQ96EL1 285 aa11.08□□□□□ -0.64
PPP4R1-213ENST00000579609 TBC1D32Q96NH3 1257 aa11.08□□□□□ -0.64
PPP4R1-213ENST00000579609 DCTPP1Q9H773 170 aa11.08□□□□□ -0.64
PPP4R1-213ENST00000579609 PXDNQ92626 1479 aa11.07□□□□□ -0.64
PPP4R1-213ENST00000579609 TMEM94Q12767 1356 aa11.07□□□□□ -0.64
PPP4R1-213ENST00000579609 GNAI3P08754 354 aa11.07□□□□□ -0.64
PPP4R1-213ENST00000579609 IL27Q8NEV9 243 aa11.07□□□□□ -0.64
PPP4R1-213ENST00000579609 NPM2Q86SE8 214 aaKnown RBP11.06□□□□□ -0.64
PPP4R1-213ENST00000579609 IL17REQ8NFR9 667 aa11.06□□□□□ -0.64
PPP4R1-213ENST00000579609 MRC1P22897 1456 aa11.06□□□□□ -0.64
PPP4R1-213ENST00000579609 RGPD5Q99666 1765 aa11.05□□□□□ -0.64
PPP4R1-213ENST00000579609 HEG1Q9ULI3 1381 aa11.05□□□□□ -0.64
PPP4R1-213ENST00000579609 ELL2O00472 640 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-213ENST00000579609 SOX12O15370 315 aa11.05□□□□□ -0.64
PPP4R1-213ENST00000579609 FOXO3O43524 673 aa11.05□□□□□ -0.64
PPP4R1-213ENST00000579609 NBPF6Q5VWK0 638 aa11.05□□□□□ -0.64
PPP4R1-213ENST00000579609 NBPF4Q96M43 638 aa11.05□□□□□ -0.64
PPP4R1-213ENST00000579609 ORAI2Q96SN7 254 aa11.05□□□□□ -0.64
PPP4R1-213ENST00000579609 HDAC5Q9UQL6 1122 aa11.05□□□□□ -0.64
PPP4R1-213ENST00000579609 STRCQ7RTU9 1775 aa11.05□□□□□ -0.64
PPP4R1-213ENST00000579609 ERBB3P21860 1342 aa11.05□□□□□ -0.64
PPP4R1-213ENST00000579609 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
PPP4R1-213ENST00000579609 SKAP1Q86WV1 359 aa11.04□□□□□ -0.64
PPP4R1-213ENST00000579609 RBM25P49756 843 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-213ENST00000579609 FLIIQ13045 1269 aa11.03□□□□□ -0.64
PPP4R1-213ENST00000579609 C1orf141Q5JVX7 400 aa11.03□□□□□ -0.64
PPP4R1-213ENST00000579609 CEP85Q6P2H3 762 aa11.03□□□□□ -0.64
PPP4R1-213ENST00000579609 SIRT2Q8IXJ6 389 aa11.03□□□□□ -0.64
PPP4R1-213ENST00000579609 HS6ST3Q8IZP7 471 aa11.03□□□□□ -0.64
PPP4R1-213ENST00000579609 ANKRD24Q8TF21 1146 aa11.03□□□□□ -0.64
PPP4R1-213ENST00000579609 NHSL1Q5SYE7 1610 aa11.02□□□□□ -0.64
PPP4R1-213ENST00000579609 GNAI2P04899 355 aa11.02□□□□□ -0.65
PPP4R1-213ENST00000579609 EIF4A1P60842 406 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-213ENST00000579609 TEFQ10587 303 aa11.02□□□□□ -0.65
PPP4R1-213ENST00000579609 NUTM2GQ5VZR2 741 aa11.02□□□□□ -0.65
PPP4R1-213ENST00000579609 OSBPL3Q9H4L5 887 aa11.02□□□□□ -0.65
PPP4R1-213ENST00000579609 ABCA3Q99758 1704 aa11.01□□□□□ -0.65
PPP4R1-213ENST00000579609 TUBGCP6Q96RT7 1819 aa11.01□□□□□ -0.65
PPP4R1-213ENST00000579609 RIOK3O14730 519 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-213ENST00000579609 HSP90AB1P08238 724 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-213ENST00000579609 RTL5Q5HYW3 569 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-213ENST00000579609 ANKRD45Q5TZF3 282 aa11.01□□□□□ -0.65
PPP4R1-213ENST00000579609 ZNF530Q6P9A1 599 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-213ENST00000579609 SPRYD3Q8NCJ5 442 aa11.01□□□□□ -0.65
PPP4R1-213ENST00000579609 AOX1Q06278 1338 aa11.01□□□□□ -0.65
PPP4R1-213ENST00000579609 SPATA31A3Q5VYP0 1347 aa11.01□□□□□ -0.65
PPP4R1-213ENST00000579609 LAMB4A4D0S4 1761 aa11□□□□□ -0.65
PPP4R1-213ENST00000579609 RNMTO43148 476 aaKnown RBP11□□□□□ -0.65
PPP4R1-213ENST00000579609 EPB41L2O43491 1005 aaKnown RBP11□□□□□ -0.65
PPP4R1-213ENST00000579609 HDGFL1Q5TGJ6 251 aa11□□□□□ -0.65
PPP4R1-213ENST00000579609 VSIG10Q8N0Z9 540 aa11□□□□□ -0.65
PPP4R1-213ENST00000579609 LNPKQ9C0E8 428 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 334.1 ms