RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 NBPF8Q3BBV2 869 aa6.85□□□□□ -1.31
GAPLINC-202ENST00000579007 LARP1Q6PKG0 1096 aaKnown RBP6.85□□□□□ -1.31
GAPLINC-202ENST00000579007 SND1Q7KZF4 910 aaKnown RBP eCLIP6.85□□□□□ -1.31
GAPLINC-202ENST00000579007 BANK1Q8NDB2 785 aa6.85□□□□□ -1.31
GAPLINC-202ENST00000579007 CABP2Q9NPB3 220 aa6.85□□□□□ -1.31
GAPLINC-202ENST00000579007 CCDC61Q9Y6R9 512 aa6.85□□□□□ -1.31
GAPLINC-202ENST00000579007 OVOS2A0A0G2JMS6 1433 aa6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 OVOS2A0A0J9YW53 1432 aa6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 TNS2Q63HR2 1409 aa6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 OVOS2Q6IE36 1432 aa6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 COL24A1Q17RW2 1714 aa6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 BRD4O60885 1362 aaPredicted RBP6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 SF3B2Q13435 895 aaKnown RBP6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 HIC1Q14526 733 aa6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 EZH2Q15910 746 aaKnown RBP6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 WWC1Q8IX03 1113 aa6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 PCDHB8Q9UN66 801 aa6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 PCDHB13Q9Y5F0 798 aa6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 LY75O60449 1722 aa6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 ANKRD26Q9UPS8 1709 aa6.84□□□□□ -1.31
GAPLINC-202ENST00000579007 ROCK2O75116 1388 aaKnown RBP6.83□□□□□ -1.32
GAPLINC-202ENST00000579007 AATKQ6ZMQ8 1374 aa6.83□□□□□ -1.32
GAPLINC-202ENST00000579007 PARD3Q8TEW0 1356 aa6.83□□□□□ -1.32
GAPLINC-202ENST00000579007 SBNO2Q9Y2G9 1366 aa6.83□□□□□ -1.32
GAPLINC-202ENST00000579007 TRIM37O94972 964 aa6.83□□□□□ -1.32
GAPLINC-202ENST00000579007 PRR29P0C7W0 189 aa6.83□□□□□ -1.32
GAPLINC-202ENST00000579007 SRPK2P78362 688 aaKnown RBP6.83□□□□□ -1.32
GAPLINC-202ENST00000579007 L3MBTL2Q969R5 705 aa6.83□□□□□ -1.32
GAPLINC-202ENST00000579007 PBXIP1Q96AQ6 731 aa6.83□□□□□ -1.32
GAPLINC-202ENST00000579007 CAMKK2Q96RR4 588 aa6.83□□□□□ -1.32
GAPLINC-202ENST00000579007 TOGARAM1Q9Y4F4 1720 aa6.82□□□□□ -1.32
GAPLINC-202ENST00000579007 GCP02774 474 aa6.82□□□□□ -1.32
GAPLINC-202ENST00000579007 R3HDM1Q15032 1099 aaKnown RBP6.82□□□□□ -1.32
GAPLINC-202ENST00000579007 ABTB2Q8N961 1025 aa6.82□□□□□ -1.32
GAPLINC-202ENST00000579007 CALR3Q96L12 384 aaKnown RBP6.82□□□□□ -1.32
GAPLINC-202ENST00000579007 SIN3AQ96ST3 1273 aa6.82□□□□□ -1.32
GAPLINC-202ENST00000579007 RBM47A0AV96 593 aaKnown RBP6.81□□□□□ -1.32
GAPLINC-202ENST00000579007 DPYSL4O14531 572 aa6.81□□□□□ -1.32
GAPLINC-202ENST00000579007 FCHSD2O94868 740 aa6.81□□□□□ -1.32
GAPLINC-202ENST00000579007 CSB-PGBD3P0DP91 1061 aa6.81□□□□□ -1.32
GAPLINC-202ENST00000579007 PPP1R15BQ5SWA1 713 aa6.81□□□□□ -1.32
GAPLINC-202ENST00000579007 TCP11L2Q8N4U5 519 aa6.81□□□□□ -1.32
GAPLINC-202ENST00000579007 CABP1Q9NZU7 370 aa6.81□□□□□ -1.32
GAPLINC-202ENST00000579007 BCL9O00512 1426 aa6.81□□□□□ -1.32
GAPLINC-202ENST00000579007 TAF1LQ8IZX4 1826 aa6.8□□□□□ -1.32
GAPLINC-202ENST00000579007 WDR17Q8IZU2 1322 aa6.8□□□□□ -1.32
GAPLINC-202ENST00000579007 CACNB1Q02641 598 aaPredicted RBP6.8□□□□□ -1.32
GAPLINC-202ENST00000579007 FAM196AQ6ZSG2 479 aa6.8□□□□□ -1.32
GAPLINC-202ENST00000579007 PTF1AQ7RTS3 328 aa6.8□□□□□ -1.32
GAPLINC-202ENST00000579007 PKD1L3Q7Z443 1732 aa6.8□□□□□ -1.32
GAPLINC-202ENST00000579007 ANO8Q9HCE9 1232 aaPredicted RBP6.8□□□□□ -1.32
GAPLINC-202ENST00000579007 AXIN2Q9Y2T1 843 aa6.8□□□□□ -1.32
GAPLINC-202ENST00000579007 IVNS1ABPQ9Y6Y0 642 aa6.8□□□□□ -1.32
GAPLINC-202ENST00000579007 A0A1W2PP64 1363 aa6.8□□□□□ -1.32
GAPLINC-202ENST00000579007 KAT6BQ8WYB5 2073 aa6.8□□□□□ -1.32
GAPLINC-202ENST00000579007 CHD4Q14839 1912 aa6.8□□□□□ -1.32
GAPLINC-202ENST00000579007 TTC21BQ7Z4L5 1316 aa6.79□□□□□ -1.32
GAPLINC-202ENST00000579007 EVC2Q86UK5 1308 aa6.79□□□□□ -1.32
GAPLINC-202ENST00000579007 UNCXA6NJT0 531 aa6.79□□□□□ -1.32
GAPLINC-202ENST00000579007 NLRP13Q86W25 1043 aa6.79□□□□□ -1.32
GAPLINC-202ENST00000579007 TMUB1Q9BVT8 246 aa6.79□□□□□ -1.32
GAPLINC-202ENST00000579007 THRAP3Q9Y2W1 955 aaKnown RBP6.79□□□□□ -1.32
GAPLINC-202ENST00000579007 USP31Q70CQ4 1352 aa6.79□□□□□ -1.32
GAPLINC-202ENST00000579007 KTN1Q86UP2 1357 aaKnown RBP6.79□□□□□ -1.32
GAPLINC-202ENST00000579007 ITGB4P16144 1822 aa6.78□□□□□ -1.32
GAPLINC-202ENST00000579007 C5P01031 1676 aa6.78□□□□□ -1.32
GAPLINC-202ENST00000579007 EDC4Q6P2E9 1401 aaKnown RBP6.78□□□□□ -1.32
GAPLINC-202ENST00000579007 TBC1D12O60347 775 aa6.78□□□□□ -1.32
GAPLINC-202ENST00000579007 APBA3O96018 575 aa6.78□□□□□ -1.32
GAPLINC-202ENST00000579007 ARHGEF25Q86VW2 580 aa6.78□□□□□ -1.32
GAPLINC-202ENST00000579007 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.78□□□□□ -1.32
GAPLINC-202ENST00000579007 REPIN1Q9BWE0 567 aaKnown RBP6.78□□□□□ -1.32
GAPLINC-202ENST00000579007 TTC21AQ8NDW8 1320 aa6.77□□□□□ -1.32
GAPLINC-202ENST00000579007 EVA1CP58658 441 aa6.77□□□□□ -1.33
GAPLINC-202ENST00000579007 PDE3BQ13370 1112 aa6.77□□□□□ -1.33
GAPLINC-202ENST00000579007 PROCA1Q8NCQ7 364 aaPredicted RBP6.77□□□□□ -1.33
GAPLINC-202ENST00000579007 EMILIN3Q9NT22 766 aa6.77□□□□□ -1.33
GAPLINC-202ENST00000579007 ERBB3P21860 1342 aa6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 MEGF6O75095 1541 aa6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 FECHP22830 423 aa6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 CLCN1P35523 988 aa6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 NEUROD1Q13562 356 aa6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 TMEM259Q4ZIN3 620 aa6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 NME9Q86XW9 330 aa6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 MARCH10Q8NA82 808 aaPredicted RBP6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 GLMNQ92990 594 aa6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 MS4A4AQ96JQ5 239 aa6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 GPHNQ9NQX3 736 aaPredicted RBP6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 SNRKQ9NRH2 765 aa6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 CCDC7Q96M83 1385 aa6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 VIRMAQ69YN4 1812 aaKnown RBP6.76□□□□□ -1.33
GAPLINC-202ENST00000579007 NINLQ9Y2I6 1382 aa6.75□□□□□ -1.33
GAPLINC-202ENST00000579007 DDB1Q16531 1140 aa6.75□□□□□ -1.33
GAPLINC-202ENST00000579007 TOM1L2Q6ZVM7 507 aa6.75□□□□□ -1.33
GAPLINC-202ENST00000579007 PDGFDQ9GZP0 370 aaPredicted RBP6.75□□□□□ -1.33
GAPLINC-202ENST00000579007 PRM3Q9NNZ6 103 aa6.75□□□□□ -1.33
GAPLINC-202ENST00000579007 MAP2P11137 1827 aaKnown RBP6.75□□□□□ -1.33
GAPLINC-202ENST00000579007 UBR3Q6ZT12 1888 aa6.75□□□□□ -1.33
GAPLINC-202ENST00000579007 NSD2O96028 1365 aa6.74□□□□□ -1.33
GAPLINC-202ENST00000579007 PPM1GO15355 546 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms