RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 CHIC1Q5VXU3 224 aa12.32□□□□□ -0.44
GAPLINC-202ENST00000579007 NISCHQ9Y2I1 1504 aa12.18□□□□□ -0.46
GAPLINC-202ENST00000579007 AEBP2Q6ZN18 517 aaPredicted RBP11.75□□□□□ -0.53
GAPLINC-202ENST00000579007 CCDC180Q9P1Z9 1646 aa11.06□□□□□ -0.64
GAPLINC-202ENST00000579007 ABCC9O60706 1549 aa10.92□□□□□ -0.66
GAPLINC-202ENST00000579007 PHF23Q9BUL5 403 aaPredicted RBP10.9□□□□□ -0.66
GAPLINC-202ENST00000579007 RB1CC1Q8TDY2 1594 aa10.43□□□□□ -0.74
GAPLINC-202ENST00000579007 EHMT2Q96KQ7 1210 aa10.42□□□□□ -0.74
GAPLINC-202ENST00000579007 PLPPR3Q6T4P5 718 aa10.41□□□□□ -0.74
GAPLINC-202ENST00000579007 UNC13AQ9UPW8 1703 aa10.39□□□□□ -0.75
GAPLINC-202ENST00000579007 NACADO15069 1562 aa10.34□□□□□ -0.75
GAPLINC-202ENST00000579007 SLC24A1O60721 1099 aa10.31□□□□□ -0.76
GAPLINC-202ENST00000579007 MYO15BQ96JP2 1530 aa10.2□□□□□ -0.78
GAPLINC-202ENST00000579007 BICRAQ9NZM4 1560 aa10.2□□□□□ -0.78
GAPLINC-202ENST00000579007 DNAJC5BQ9UF47 199 aa10.18□□□□□ -0.78
GAPLINC-202ENST00000579007 ZCCHC6Q5VYS8 1495 aaKnown RBP10.15□□□□□ -0.78
GAPLINC-202ENST00000579007 DCAF1Q9Y4B6 1507 aa10.07□□□□□ -0.8
GAPLINC-202ENST00000579007 PABPN1Q86U42 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
GAPLINC-202ENST00000579007 SCRIBQ14160 1630 aa10.04□□□□□ -0.8
GAPLINC-202ENST00000579007 KCNA4P22459 653 aa10.03□□□□□ -0.8
GAPLINC-202ENST00000579007 DCAF8L2P0C7V8 631 aa10.02□□□□□ -0.81
GAPLINC-202ENST00000579007 SHROOM4Q9ULL8 1493 aa9.99□□□□□ -0.81
GAPLINC-202ENST00000579007 SENP3Q9H4L4 574 aaPredicted RBP9.99□□□□□ -0.81
GAPLINC-202ENST00000579007 CSRNP3Q8WYN3 585 aa9.95□□□□□ -0.82
GAPLINC-202ENST00000579007 CC2D2AQ9P2K1 1620 aa9.93□□□□□ -0.82
GAPLINC-202ENST00000579007 EIF4G1Q04637 1599 aaKnown RBP9.91□□□□□ -0.82
GAPLINC-202ENST00000579007 CECR2Q9BXF3 1484 aa9.82□□□□□ -0.84
GAPLINC-202ENST00000579007 AMER1Q5JTC6 1135 aaPredicted RBP9.77□□□□□ -0.85
GAPLINC-202ENST00000579007 SLC4A1APQ9BWU0 796 aaKnown RBP9.74□□□□□ -0.85
GAPLINC-202ENST00000579007 RTN4Q9NQC3 1192 aaKnown RBP9.7□□□□□ -0.86
GAPLINC-202ENST00000579007 ADRA2BP18089 450 aa9.63□□□□□ -0.87
GAPLINC-202ENST00000579007 SMARCA4P51532 1647 aa9.57□□□□□ -0.88
GAPLINC-202ENST00000579007 HMGXB3Q12766 1538 aa9.52□□□□□ -0.88
GAPLINC-202ENST00000579007 ATAD2BQ9ULI0 1458 aa9.5□□□□□ -0.89
GAPLINC-202ENST00000579007 NCAPD3P42695 1498 aa9.49□□□□□ -0.89
GAPLINC-202ENST00000579007 SMARCA2P51531 1590 aa9.48□□□□□ -0.89
GAPLINC-202ENST00000579007 PEG3Q9GZU2 1588 aa9.47□□□□□ -0.89
GAPLINC-202ENST00000579007 BAZ1AQ9NRL2 1556 aaPredicted RBP9.46□□□□□ -0.89
GAPLINC-202ENST00000579007 THOC2Q8NI27 1593 aaKnown RBP9.43□□□□□ -0.9
GAPLINC-202ENST00000579007 CUX2O14529 1486 aa9.42□□□□□ -0.9
GAPLINC-202ENST00000579007 NESP48681 1621 aa9.42□□□□□ -0.9
GAPLINC-202ENST00000579007 KIF21AQ7Z4S6 1674 aa9.41□□□□□ -0.9
GAPLINC-202ENST00000579007 MROH2BQ7Z745 1585 aa9.41□□□□□ -0.9
GAPLINC-202ENST00000579007 BAZ1BQ9UIG0 1483 aaKnown RBP9.4□□□□□ -0.9
GAPLINC-202ENST00000579007 ERCC6Q03468 1493 aa9.39□□□□□ -0.91
GAPLINC-202ENST00000579007 LAMC3Q9Y6N6 1575 aa9.36□□□□□ -0.91
GAPLINC-202ENST00000579007 WIZO95785 1651 aa9.34□□□□□ -0.91
GAPLINC-202ENST00000579007 NCBP3Q53F19 620 aaKnown RBP9.32□□□□□ -0.92
GAPLINC-202ENST00000579007 PPP6R1Q9UPN7 881 aa9.3□□□□□ -0.92
GAPLINC-202ENST00000579007 DNAJC5Q9H3Z4 198 aa9.28□□□□□ -0.92
GAPLINC-202ENST00000579007 PPP4R3CPQ6ZMV5 832 aa9.27□□□□□ -0.93
GAPLINC-202ENST00000579007 PRDM2Q13029 1718 aa9.25□□□□□ -0.93
GAPLINC-202ENST00000579007 ZBTB22O15209 634 aa9.24□□□□□ -0.93
GAPLINC-202ENST00000579007 WDR62O43379 1518 aa9.23□□□□□ -0.93
GAPLINC-202ENST00000579007 TOP2AP11388 1531 aaKnown RBP9.2□□□□□ -0.94
GAPLINC-202ENST00000579007 FOXD1Q16676 465 aa9.19□□□□□ -0.94
GAPLINC-202ENST00000579007 MRC2Q9UBG0 1479 aa9.19□□□□□ -0.94
GAPLINC-202ENST00000579007 PDS5BQ9NTI5 1447 aa9.18□□□□□ -0.94
GAPLINC-202ENST00000579007 CADPSQ9ULU8 1353 aa9.16□□□□□ -0.94
GAPLINC-202ENST00000579007 CEP164Q9UPV0 1460 aa9.15□□□□□ -0.95
GAPLINC-202ENST00000579007 RSF1Q96T23 1441 aaPredicted RBP9.14□□□□□ -0.95
GAPLINC-202ENST00000579007 NPM3O75607 178 aaKnown RBP9.14□□□□□ -0.95
GAPLINC-202ENST00000579007 CFTRP13569 1480 aa9.12□□□□□ -0.95
GAPLINC-202ENST00000579007 FANCD2Q9BXW9 1451 aa9.12□□□□□ -0.95
GAPLINC-202ENST00000579007 URB2Q14146 1524 aaKnown RBP9.1□□□□□ -0.95
GAPLINC-202ENST00000579007 FOXD4L1Q9NU39 408 aa9.02□□□□□ -0.97
GAPLINC-202ENST00000579007 CCDC88BA6NC98 1476 aa9.02□□□□□ -0.97
GAPLINC-202ENST00000579007 EIF4G3O43432 1585 aaKnown RBP9.01□□□□□ -0.97
GAPLINC-202ENST00000579007 CHD1O14646 1710 aa8.98□□□□□ -0.97
GAPLINC-202ENST00000579007 TOPBP1Q92547 1522 aa8.98□□□□□ -0.97
GAPLINC-202ENST00000579007 DNMBPQ6XZF7 1577 aa8.98□□□□□ -0.97
GAPLINC-202ENST00000579007 ZNF608Q9ULD9 1512 aaPredicted RBP8.97□□□□□ -0.97
GAPLINC-202ENST00000579007 TARBP1Q13395 1621 aaKnown RBP8.97□□□□□ -0.97
GAPLINC-202ENST00000579007 RIMBP3CA6NJZ7 1639 aa8.95□□□□□ -0.98
GAPLINC-202ENST00000579007 RIMBP3BA6NNM3 1639 aa8.95□□□□□ -0.98
GAPLINC-202ENST00000579007 RIMBP3Q9UFD9 1639 aa8.95□□□□□ -0.98
GAPLINC-202ENST00000579007 BCANQ96GW7 911 aa8.95□□□□□ -0.98
GAPLINC-202ENST00000579007 IFT140Q96RY7 1462 aa8.94□□□□□ -0.98
GAPLINC-202ENST00000579007 DAXXQ9UER7 740 aaPredicted RBP8.93□□□□□ -0.98
GAPLINC-202ENST00000579007 WDR97A6NE52 1622 aa8.93□□□□□ -0.98
GAPLINC-202ENST00000579007 PLCB2Q00722 1185 aa8.92□□□□□ -0.98
GAPLINC-202ENST00000579007 FKBP8Q14318 412 aa8.92□□□□□ -0.98
GAPLINC-202ENST00000579007 PRKCSHP14314 528 aaPredicted RBP8.9□□□□□ -0.98
GAPLINC-202ENST00000579007 TAOK2Q9UL54 1235 aa8.89□□□□□ -0.99
GAPLINC-202ENST00000579007 POLA1P09884 1462 aaPredicted RBP8.89□□□□□ -0.99
GAPLINC-202ENST00000579007 ARHGEF11O15085 1522 aa8.88□□□□□ -0.99
GAPLINC-202ENST00000579007 ABCC8Q09428 1581 aa8.87□□□□□ -0.99
GAPLINC-202ENST00000579007 TRIM41Q8WV44 630 aa8.87□□□□□ -0.99
GAPLINC-202ENST00000579007 PBRM1Q86U86 1689 aa8.87□□□□□ -0.99
GAPLINC-202ENST00000579007 CUX1P39880 1505 aa8.85□□□□□ -0.99
GAPLINC-202ENST00000579007 CNKSR2Q8WXI2 1034 aa8.84□□□□□ -0.99
GAPLINC-202ENST00000579007 AQRO60306 1485 aaKnown RBP eCLIP8.83□□□□□ -1
GAPLINC-202ENST00000579007 FGD5Q6ZNL6 1462 aa8.83□□□□□ -1
GAPLINC-202ENST00000579007 RAD54L2Q9Y4B4 1467 aa8.83□□□□□ -1
GAPLINC-202ENST00000579007 CLASP1Q7Z460 1538 aa8.82□□□□□ -1
GAPLINC-202ENST00000579007 ABCA5Q8WWZ7 1642 aa8.81□□□□□ -1
GAPLINC-202ENST00000579007 OSCARQ8IYS5 282 aa8.8□□□□□ -1
GAPLINC-202ENST00000579007 SNAPC4Q5SXM2 1469 aa8.8□□□□□ -1
GAPLINC-202ENST00000579007 ARAP1Q96P48 1450 aa8.8□□□□□ -1
GAPLINC-202ENST00000579007 BIVM-ERCC5R4GMW8 1640 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms