RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 WAPLQ7Z5K2 1190 aa14.73□□□□□ -0.05
COL4A6-209ENST00000545689 FKBP4Q02790 459 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL4A6-209ENST00000545689 PTPRKQ15262 1439 aa14.73□□□□□ -0.05
COL4A6-209ENST00000545689 UBAC1Q9BSL1 405 aa14.72□□□□□ -0.05
COL4A6-209ENST00000545689 UPF3BQ9BZI7 483 aaKnown RBP14.72□□□□□ -0.05
COL4A6-209ENST00000545689 ODF2Q5BJF6 829 aa14.72□□□□□ -0.05
COL4A6-209ENST00000545689 TBC1D2Q9BYX2 928 aa14.72□□□□□ -0.05
COL4A6-209ENST00000545689 STARD3NLO95772 234 aa14.72□□□□□ -0.05
COL4A6-209ENST00000545689 SOGA3Q5TF21 947 aa14.72□□□□□ -0.05
COL4A6-209ENST00000545689 DNAAF4Q8WXU2 420 aa14.72□□□□□ -0.05
COL4A6-209ENST00000545689 ERLIN1O75477 346 aa14.72□□□□□ -0.05
COL4A6-209ENST00000545689 THUMPD2Q9BTF0 503 aaKnown RBP14.72□□□□□ -0.05
COL4A6-209ENST00000545689 PRDM11Q9NQV5 511 aa14.71□□□□□ -0.05
COL4A6-209ENST00000545689 IKQ13123 557 aaPredicted RBP14.71□□□□□ -0.05
COL4A6-209ENST00000545689 NUP153P49790 1475 aaKnown RBP14.71□□□□□ -0.06
COL4A6-209ENST00000545689 CTAGE5O15320 804 aa14.71□□□□□ -0.06
COL4A6-209ENST00000545689 TDO2P48775 406 aa14.71□□□□□ -0.06
COL4A6-209ENST00000545689 EMILIN1Q9Y6C2 1016 aa14.71□□□□□ -0.06
COL4A6-209ENST00000545689 KIF21AQ7Z4S6 1674 aa14.7□□□□□ -0.06
COL4A6-209ENST00000545689 POLR3AO14802 1390 aaPredicted RBP14.7□□□□□ -0.06
COL4A6-209ENST00000545689 IQCEQ6IPM2 695 aa14.7□□□□□ -0.06
COL4A6-209ENST00000545689 TBC1D32Q96NH3 1257 aa14.7□□□□□ -0.06
COL4A6-209ENST00000545689 DBF4Q9UBU7 674 aaPredicted RBP14.7□□□□□ -0.06
COL4A6-209ENST00000545689 PIK3R4Q99570 1358 aa14.7□□□□□ -0.06
COL4A6-209ENST00000545689 KRT18P05783 430 aaKnown RBP14.7□□□□□ -0.06
COL4A6-209ENST00000545689 LIMCH1Q9UPQ0 1083 aa14.7□□□□□ -0.06
COL4A6-209ENST00000545689 IGHMBP2P38935 993 aaKnown RBP14.7□□□□□ -0.06
COL4A6-209ENST00000545689 DDX54Q8TDD1 881 aaKnown RBP14.7□□□□□ -0.06
COL4A6-209ENST00000545689 PRM3Q9NNZ6 103 aa14.7□□□□□ -0.06
COL4A6-209ENST00000545689 FAM177BA6PVY3 158 aa14.7□□□□□ -0.06
COL4A6-209ENST00000545689 ZNF608Q9ULD9 1512 aaPredicted RBP14.7□□□□□ -0.06
COL4A6-209ENST00000545689 PRPF40BQ6NWY9 871 aaKnown RBP14.7□□□□□ -0.06
COL4A6-209ENST00000545689 KDM4AO75164 1064 aa14.69□□□□□ -0.06
COL4A6-209ENST00000545689 PDCL2Q8N4E4 241 aa14.69□□□□□ -0.06
COL4A6-209ENST00000545689 EVI5LQ96CN4 794 aa14.69□□□□□ -0.06
COL4A6-209ENST00000545689 UQCRHLA0A096LP55 91 aa14.69□□□□□ -0.06
COL4A6-209ENST00000545689 UQCRHP07919 91 aa14.69□□□□□ -0.06
COL4A6-209ENST00000545689 IDI1Q13907 227 aa14.69□□□□□ -0.06
COL4A6-209ENST00000545689 SYCE3A1L190 88 aa14.69□□□□□ -0.06
COL4A6-209ENST00000545689 SMARCA5O60264 1052 aaPredicted RBP14.69□□□□□ -0.06
COL4A6-209ENST00000545689 PIK3C2GO75747 1445 aa14.69□□□□□ -0.06
COL4A6-209ENST00000545689 AIDAQ96BJ3 306 aa14.69□□□□□ -0.06
COL4A6-209ENST00000545689 HSP90AB2PQ58FF8 381 aa14.69□□□□□ -0.06
COL4A6-209ENST00000545689 NUP133Q8WUM0 1156 aa14.69□□□□□ -0.06
COL4A6-209ENST00000545689 ANO10Q9NW15 660 aa14.69□□□□□ -0.06
COL4A6-209ENST00000545689 ATP10BO94823 1461 aa14.68□□□□□ -0.06
COL4A6-209ENST00000545689 EIF3JO75822 258 aaKnown RBP14.68□□□□□ -0.06
COL4A6-209ENST00000545689 KIAA0556O60303 1618 aa14.68□□□□□ -0.06
COL4A6-209ENST00000545689 HSP90AB3PQ58FF7 597 aa14.68□□□□□ -0.06
COL4A6-209ENST00000545689 AEBP2Q6ZN18 517 aaPredicted RBP14.68□□□□□ -0.06
COL4A6-209ENST00000545689 CCDC83Q8IWF9 413 aa14.68□□□□□ -0.06
COL4A6-209ENST00000545689 WDR62O43379 1518 aa14.68□□□□□ -0.06
COL4A6-209ENST00000545689 BRPF1P55201 1214 aaPredicted RBP14.68□□□□□ -0.06
COL4A6-209ENST00000545689 PHAXQ9H814 394 aaKnown RBP14.68□□□□□ -0.06
COL4A6-209ENST00000545689 ERLIN2O94905 339 aa14.68□□□□□ -0.06
COL4A6-209ENST00000545689 FLIIQ13045 1269 aa14.68□□□□□ -0.06
COL4A6-209ENST00000545689 TTC22Q5TAA0 569 aa14.68□□□□□ -0.06
COL4A6-209ENST00000545689 LEKR1Q6ZMV7 388 aa14.68□□□□□ -0.06
COL4A6-209ENST00000545689 NUCB1Q02818 461 aa14.68□□□□□ -0.06
COL4A6-209ENST00000545689 TNPO1Q92973 898 aaKnown RBP14.68□□□□□ -0.06
COL4A6-209ENST00000545689 MTMR7Q9Y216 660 aa14.68□□□□□ -0.06
COL4A6-209ENST00000545689 CCDC196A0A1B0GTZ2 297 aa14.67□□□□□ -0.06
COL4A6-209ENST00000545689 RRP9O43818 475 aaKnown RBP14.67□□□□□ -0.06
COL4A6-209ENST00000545689 PHF8Q9UPP1 1060 aa14.67□□□□□ -0.06
COL4A6-209ENST00000545689 SYCP1Q15431 976 aa14.67□□□□□ -0.06
COL4A6-209ENST00000545689 MIS18AQ9NYP9 233 aa14.67□□□□□ -0.06
COL4A6-209ENST00000545689 TTLL5Q6EMB2 1281 aa14.67□□□□□ -0.06
COL4A6-209ENST00000545689 LRRFIP2Q9Y608 721 aaKnown RBP14.67□□□□□ -0.06
COL4A6-209ENST00000545689 MCM5P33992 734 aa14.67□□□□□ -0.06
COL4A6-209ENST00000545689 TBC1D9Q6ZT07 1266 aa14.67□□□□□ -0.06
COL4A6-209ENST00000545689 TTC21AQ8NDW8 1320 aa14.67□□□□□ -0.06
COL4A6-209ENST00000545689 SYCP2Q9BX26 1530 aa14.67□□□□□ -0.06
COL4A6-209ENST00000545689 MBIPQ9NS73 344 aa14.67□□□□□ -0.06
COL4A6-209ENST00000545689 ZNF287Q9HBT7 754 aa14.66□□□□□ -0.06
COL4A6-209ENST00000545689 ADAMTS12P58397 1594 aa14.66□□□□□ -0.06
COL4A6-209ENST00000545689 DDX19AQ9NUU7 478 aaKnown RBP14.66□□□□□ -0.06
COL4A6-209ENST00000545689 BMP2KQ9NSY1 1161 aaPredicted RBP14.66□□□□□ -0.06
COL4A6-209ENST00000545689 NEMFO60524 1076 aa14.66□□□□□ -0.06
COL4A6-209ENST00000545689 METTL24Q5JXM2 366 aa14.66□□□□□ -0.06
COL4A6-209ENST00000545689 MYD88Q99836 296 aa14.66□□□□□ -0.06
COL4A6-209ENST00000545689 HMG20BQ9P0W2 317 aa14.66□□□□□ -0.06
COL4A6-209ENST00000545689 ZNF652Q9Y2D9 606 aa14.66□□□□□ -0.06
COL4A6-209ENST00000545689 DEF6Q9H4E7 631 aa14.65□□□□□ -0.06
COL4A6-209ENST00000545689 ECHDC1Q9NTX5 307 aa14.65□□□□□ -0.06
COL4A6-209ENST00000545689 RAI14Q9P0K7 980 aa14.65□□□□□ -0.06
COL4A6-209ENST00000545689 IFIT1P09914 478 aaKnown RBP14.65□□□□□ -0.06
COL4A6-209ENST00000545689 LRP2BPQ9P2M1 347 aa14.65□□□□□ -0.06
COL4A6-209ENST00000545689 UVSSAQ2YD98 709 aa14.65□□□□□ -0.06
COL4A6-209ENST00000545689 AMOTL2Q9Y2J4 779 aa14.65□□□□□ -0.06
COL4A6-209ENST00000545689 CAVIN2O95810 425 aa14.64□□□□□ -0.07
COL4A6-209ENST00000545689 ZFYVE9O95405 1425 aa14.64□□□□□ -0.07
COL4A6-209ENST00000545689 SSFA2P28290 1259 aa14.64□□□□□ -0.07
COL4A6-209ENST00000545689 UHRF1BP1Q6BDS2 1440 aa14.64□□□□□ -0.07
COL4A6-209ENST00000545689 ZNF518AQ6AHZ1 1483 aa14.64□□□□□ -0.07
COL4A6-209ENST00000545689 ZSCAN12O43309 604 aa14.64□□□□□ -0.07
COL4A6-209ENST00000545689 IGHDP01880 384 aa14.64□□□□□ -0.07
COL4A6-209ENST00000545689 CCDC181Q5TID7 509 aa14.64□□□□□ -0.07
COL4A6-209ENST00000545689 A2MP01023 1474 aa14.64□□□□□ -0.07
COL4A6-209ENST00000545689 IDH1O75874 414 aaKnown RBP14.64□□□□□ -0.07
COL4A6-209ENST00000545689 TMOD3Q9NYL9 352 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms