RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 SGSM3Q96HU1 749 aa7□□□□□ -1.29
RAB3GAP1-207ENST00000539493 NKTRP30414 1462 aaKnown RBP6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 WASLO00401 505 aaPredicted RBP6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 CYP2C19P33261 490 aa6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 KIAA2012Q0VF49 1180 aa6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 FKBP5Q13451 457 aaPredicted RBP6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 KLHL40Q2TBA0 621 aa6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 PIBF1Q8WXW3 757 aa6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 CRBNQ96SW2 442 aa6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 RASSF4Q9H2L5 321 aa6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 COL3A1P02461 1466 aaPredicted RBP6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 MAPK8IP3Q9UPT6 1336 aa6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 U2AF2P26368 475 aaKnown RBP eCLIP6.99□□□□□ -1.294e-7■■■□□ 18.9
RAB3GAP1-207ENST00000539493 TRDNQ13061 729 aa6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 EP400NLQ6ZTU2 488 aa6.99□□□□□ -1.29
RAB3GAP1-207ENST00000539493 KLHL33A6NCF5 533 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 SPDYE4A6NLX3 237 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 LTKP29376 864 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 RAD51AP2Q09MP3 1159 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 TCP11L2Q8N4U5 519 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 ITFG2Q969R8 447 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 BORCS6Q96GS4 357 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 PHF23Q9BUL5 403 aaPredicted RBP6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 UPF2Q9HAU5 1272 aaKnown RBP6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 RSPH14Q9UHP6 348 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 PLEKHG1Q9ULL1 1385 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 C3P01024 1663 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 CPSF1Q10570 1443 aaKnown RBP6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 PPIP5K1Q6PFW1 1433 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 RAB3GAP1Q15042 981 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 C20orf194Q5TEA3 1177 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 ZBTB9Q96C00 473 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 GBP4Q96PP9 640 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 KIF20BQ96Q89 1820 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 U2AF1L5P0DN76 240 aaPredicted RBP6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 SSR1P43307 286 aaKnown RBP6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 U2AF1Q01081 240 aaKnown RBP eCLIP6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 SKAP1Q86WV1 359 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 GPATCH11Q8N954 259 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 MKL1Q969V6 931 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 PRDM16Q9HAZ2 1276 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 ATG3Q9NT62 314 aa6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 RRP7AQ9Y3A4 280 aaKnown RBP6.98□□□□□ -1.29
RAB3GAP1-207ENST00000539493 ROBO2Q9HCK4 1378 aa6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 ADGRB2O60241 1585 aa6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 PPP1R12AO14974 1030 aaPredicted RBP6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 ZNF853P0CG23 659 aa6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 CASQ1P31415 396 aa6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 ANAPC15P60006 121 aa6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 NEUROD2Q15784 382 aa6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 TSGA10IPQ3SY00 556 aa6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 SMC5Q8IY18 1101 aa6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 FAM210AQ96ND0 272 aa6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 PNPLA6Q8IY17 1366 aa6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 SLIT1O75093 1534 aa6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 FER1L4A9Z1Z3 1794 aa6.97□□□□□ -1.29
RAB3GAP1-207ENST00000539493 ANKRD33BA6NCL7 494 aa6.96□□□□□ -1.29
RAB3GAP1-207ENST00000539493 CCDC27Q2M243 656 aa6.96□□□□□ -1.29
RAB3GAP1-207ENST00000539493 EDC4Q6P2E9 1401 aaKnown RBP6.96□□□□□ -1.29
RAB3GAP1-207ENST00000539493 SUGP1Q8IWZ8 645 aaKnown RBP6.96□□□□□ -1.29
RAB3GAP1-207ENST00000539493 CDC42BPGQ6DT37 1551 aa6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 ARHGAP23Q9P227 1491 aa6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 NCKAP5LQ9HCH0 1330 aa6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 JMYQ8N9B5 988 aa6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 SNX21Q969T3 373 aa6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 NUDT16Q96DE0 195 aaKnown RBP6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 PLEKHF1Q96S99 279 aa6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 OS9Q13438 667 aaPredicted RBP6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 KRT222Q8N1A0 295 aa6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 DIAPH3Q9NSV4 1193 aa6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CCDC61Q9Y6R9 512 aa6.96□□□□□ -1.3
RAB3GAP1-207ENST00000539493 U2SURPO15042 1029 aaKnown RBP6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 BCAR3O75815 825 aa6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 SEC24BO95487 1268 aa6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 HNRNPH2P55795 449 aaKnown RBP6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CHAF1AQ13111 956 aaPredicted RBP6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CASC1Q6TDU7 716 aa6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 WDR63Q8IWG1 891 aa6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 PTPRUQ92729 1446 aa6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 PRR36Q9H6K5 1346 aa6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 TNNT3P45378 269 aaPredicted RBP6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 KIF18AQ8NI77 898 aa6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CXorf56Q9H5V9 222 aa6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 EID1Q9Y6B2 187 aa6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.95□□□□□ -1.3
RAB3GAP1-207ENST00000539493 DIAPH1O60610 1272 aaKnown RBP6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 FBLN1P23142 703 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CALRP27797 417 aaKnown RBP6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 TNPO1Q92973 898 aaKnown RBP6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 KIF1BPQ96EK5 621 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 POLKQ9UBT6 870 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 MON2Q7Z3U7 1717 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 ATP2B1P20020 1258 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 CCDC91Q7Z6B0 441 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 NME9Q86XW9 330 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 NFATC2IPQ8NCF5 419 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 MTA1Q13330 715 aa6.94□□□□□ -1.3
RAB3GAP1-207ENST00000539493 NOLC1Q14978 699 aaKnown RBP eCLIP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms