RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
UBXN1-205ENST00000525004 HNRNPUQ00839 825 aaKnown RBP eCLIP18.37■□□□□ 0.53
UBXN1-205ENST00000525004 CALD1Q05682 793 aaKnown RBP18.37■□□□□ 0.53
UBXN1-205ENST00000525004 TEFQ10587 303 aa18.37■□□□□ 0.53
UBXN1-205ENST00000525004 ACSBG1Q96GR2 724 aa18.37■□□□□ 0.53
UBXN1-205ENST00000525004 TMOD3Q9NYL9 352 aa18.37■□□□□ 0.53
UBXN1-205ENST00000525004 PAPPAQ13219 1627 aa18.37■□□□□ 0.53
UBXN1-205ENST00000525004 CHL1O00533 1208 aa18.36■□□□□ 0.53
UBXN1-205ENST00000525004 ILDR2Q71H61 639 aa18.36■□□□□ 0.53
UBXN1-205ENST00000525004 KDM3BQ7LBC6 1761 aa18.36■□□□□ 0.53
UBXN1-205ENST00000525004 PTF1AQ7RTS3 328 aa18.36■□□□□ 0.53
UBXN1-205ENST00000525004 CFAP44Q96MT7 982 aa18.36■□□□□ 0.53
UBXN1-205ENST00000525004 SALL2Q9Y467 1007 aaPredicted RBP18.36■□□□□ 0.53
UBXN1-205ENST00000525004 TNS1Q9HBL0 1735 aaKnown RBP18.35■□□□□ 0.53
UBXN1-205ENST00000525004 ZBED9Q6R2W3 1325 aa18.35■□□□□ 0.53
UBXN1-205ENST00000525004 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
UBXN1-205ENST00000525004 TRIM37O94972 964 aa18.34■□□□□ 0.53
UBXN1-205ENST00000525004 IFT57Q9NWB7 429 aa18.34■□□□□ 0.53
UBXN1-205ENST00000525004 LY75O60449 1722 aa18.33■□□□□ 0.52
UBXN1-205ENST00000525004 CCDC125Q86Z20 511 aa18.33■□□□□ 0.52
UBXN1-205ENST00000525004 SYTL4Q96C24 671 aaPredicted RBP18.33■□□□□ 0.52
UBXN1-205ENST00000525004 ATG3Q9NT62 314 aa18.33■□□□□ 0.52
UBXN1-205ENST00000525004 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
UBXN1-205ENST00000525004 GNAI1P63096 354 aa18.32■□□□□ 0.52
UBXN1-205ENST00000525004 ZNF831Q5JPB2 1677 aa18.31■□□□□ 0.52
UBXN1-205ENST00000525004 PLSCR1O15162 318 aa18.31■□□□□ 0.52
UBXN1-205ENST00000525004 GOLGA2Q08379 1002 aa18.31■□□□□ 0.52
UBXN1-205ENST00000525004 ZNF790Q6PG37 636 aa18.31■□□□□ 0.52
UBXN1-205ENST00000525004 TRMT2AQ8IZ69 625 aaKnown RBP18.31■□□□□ 0.52
UBXN1-205ENST00000525004 SPINK5Q9NQ38 1064 aaPredicted RBP18.31■□□□□ 0.52
UBXN1-205ENST00000525004 ASAP1Q9ULH1 1129 aa18.31■□□□□ 0.52
UBXN1-205ENST00000525004 RGPD3A6NKT7 1758 aaPredicted RBP18.31■□□□□ 0.52
UBXN1-205ENST00000525004 RGPD4Q7Z3J3 1758 aa18.31■□□□□ 0.52
UBXN1-205ENST00000525004 SMARCC1Q92922 1105 aaPredicted RBP18.3■□□□□ 0.52
UBXN1-205ENST00000525004 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
UBXN1-205ENST00000525004 SLFN5Q08AF3 891 aa18.29■□□□□ 0.52
UBXN1-205ENST00000525004 SLC39A6Q13433 755 aa18.29■□□□□ 0.52
UBXN1-205ENST00000525004 MIS18AQ9NYP9 233 aa18.29■□□□□ 0.52
UBXN1-205ENST00000525004 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
UBXN1-205ENST00000525004 CICQ96RK0 1608 aaPredicted RBP18.28■□□□□ 0.52
UBXN1-205ENST00000525004 KCNQ3O43525 872 aa18.28■□□□□ 0.52
UBXN1-205ENST00000525004 MBIPQ9NS73 344 aa18.28■□□□□ 0.52
UBXN1-205ENST00000525004 E9PSI1 815 aa18.27■□□□□ 0.52
UBXN1-205ENST00000525004 EIF4A1P60842 406 aaKnown RBP18.27■□□□□ 0.52
UBXN1-205ENST00000525004 TSPYL4Q9UJ04 414 aa18.27■□□□□ 0.52
UBXN1-205ENST00000525004 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
UBXN1-205ENST00000525004 UPF1Q92900 1129 aaKnown RBP eCLIP18.26■□□□□ 0.51
UBXN1-205ENST00000525004 CDCA7LQ96GN5 454 aa18.26■□□□□ 0.51
UBXN1-205ENST00000525004 PALLDQ8WX93 1383 aa18.26■□□□□ 0.51
UBXN1-205ENST00000525004 APBA3O96018 575 aa18.25■□□□□ 0.51
UBXN1-205ENST00000525004 ZNF496Q96IT1 587 aaPredicted RBP18.25■□□□□ 0.51
UBXN1-205ENST00000525004 SLC4A9Q96Q91 983 aa18.25■□□□□ 0.51
UBXN1-205ENST00000525004 MYH16Q9H6N6 1097 aa18.25■□□□□ 0.51
UBXN1-205ENST00000525004 TAF1LQ8IZX4 1826 aa18.25■□□□□ 0.51
UBXN1-205ENST00000525004 TTC5Q8N0Z6 440 aa18.24■□□□□ 0.51
UBXN1-205ENST00000525004 PROM2Q8N271 834 aa18.24■□□□□ 0.51
UBXN1-205ENST00000525004 FMNL2Q96PY5 1086 aa18.24■□□□□ 0.51
UBXN1-205ENST00000525004 LAS1LQ9Y4W2 734 aaKnown RBP18.24■□□□□ 0.51
UBXN1-205ENST00000525004 FANCIQ9NVI1 1328 aa18.23■□□□□ 0.51
UBXN1-205ENST00000525004 LOC102724428A0A0B4J2F2 783 aa18.23■□□□□ 0.51
UBXN1-205ENST00000525004 SIK1P57059 783 aa18.23■□□□□ 0.51
UBXN1-205ENST00000525004 DUSP27Q5VZP5 1158 aa18.23■□□□□ 0.51
UBXN1-205ENST00000525004 TSR2Q969E8 191 aaKnown RBP18.23■□□□□ 0.51
UBXN1-205ENST00000525004 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
UBXN1-205ENST00000525004 GIGYF1O75420 1035 aaPredicted RBP18.22■□□□□ 0.51
UBXN1-205ENST00000525004 TJP1Q07157 1748 aa18.21■□□□□ 0.51
UBXN1-205ENST00000525004 PTCD1O75127 700 aaKnown RBP18.21■□□□□ 0.51
UBXN1-205ENST00000525004 SF3B2Q13435 895 aaKnown RBP18.21■□□□□ 0.51
UBXN1-205ENST00000525004 SLC27A3Q5K4L6 730 aa18.21■□□□□ 0.51
UBXN1-205ENST00000525004 SOS1Q07889 1333 aaPredicted RBP18.21■□□□□ 0.51
UBXN1-205ENST00000525004 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
UBXN1-205ENST00000525004 HOXB7P09629 217 aa18.2■□□□□ 0.5
UBXN1-205ENST00000525004 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
UBXN1-205ENST00000525004 BAG6P46379 1132 aa18.2■□□□□ 0.5
UBXN1-205ENST00000525004 TXNRD1Q16881 649 aa18.2■□□□□ 0.5
UBXN1-205ENST00000525004 TEX13AQ9BXU3 409 aaPredicted RBP18.2■□□□□ 0.5
UBXN1-205ENST00000525004 CACNA1FO60840 1977 aa18.2■□□□□ 0.5
UBXN1-205ENST00000525004 MYH14Q7Z406 1995 aaKnown RBP18.2■□□□□ 0.5
UBXN1-205ENST00000525004 C5P01031 1676 aa18.19■□□□□ 0.5
UBXN1-205ENST00000525004 RREB1Q92766 1687 aa18.19■□□□□ 0.5
UBXN1-205ENST00000525004 HMGB2P26583 209 aaKnown RBP18.19■□□□□ 0.5
UBXN1-205ENST00000525004 C8orf58Q8NAV2 365 aa18.19■□□□□ 0.5
UBXN1-205ENST00000525004 YTHDC1Q96MU7 727 aaKnown RBP18.19■□□□□ 0.5
UBXN1-205ENST00000525004 RBM42Q9BTD8 480 aaKnown RBP18.19■□□□□ 0.5
UBXN1-205ENST00000525004 LRRC4BQ9NT99 713 aa18.19■□□□□ 0.5
UBXN1-205ENST00000525004 LAMB4A4D0S4 1761 aa18.19■□□□□ 0.5
UBXN1-205ENST00000525004 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
UBXN1-205ENST00000525004 EN1Q05925 392 aaPredicted RBP18.18■□□□□ 0.5
UBXN1-205ENST00000525004 KRT24Q2M2I5 525 aa18.18■□□□□ 0.5
UBXN1-205ENST00000525004 EXOSC9Q06265 439 aaKnown RBP18.17■□□□□ 0.5
UBXN1-205ENST00000525004 ITPK1Q13572 414 aa18.17■□□□□ 0.5
UBXN1-205ENST00000525004 DEFB132Q7Z7B7 95 aa18.17■□□□□ 0.5
UBXN1-205ENST00000525004 TSPYL6Q8N831 410 aa18.17■□□□□ 0.5
UBXN1-205ENST00000525004 CCNL1Q9UK58 526 aaPredicted RBP18.17■□□□□ 0.5
UBXN1-205ENST00000525004 VAMP4O75379 141 aa18.16■□□□□ 0.5
UBXN1-205ENST00000525004 EZH2Q15910 746 aaKnown RBP18.16■□□□□ 0.5
UBXN1-205ENST00000525004 USP16Q9Y5T5 823 aa18.16■□□□□ 0.5
UBXN1-205ENST00000525004 PRAMEF22A3QJZ6 481 aa18.15■□□□□ 0.5
UBXN1-205ENST00000525004 CT47B1P0C2W7 299 aaPredicted RBP18.15■□□□□ 0.5
UBXN1-205ENST00000525004 CYP19A1P11511 503 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms